RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 ERBB3P21860 1342 aa33.35■■■□□ 2.93
TPM2-203ENST00000378292 PXDNQ92626 1479 aa33.35■■■□□ 2.93
TPM2-203ENST00000378292 NPHP3Q7Z494 1330 aa33.35■■■□□ 2.93
TPM2-203ENST00000378292 MPRIPQ6WCQ1 1025 aa33.35■■■□□ 2.93
TPM2-203ENST00000378292 TEFQ10587 303 aa33.34■■■□□ 2.93
TPM2-203ENST00000378292 BMP2KLQ5H9B9 411 aa33.34■■■□□ 2.93
TPM2-203ENST00000378292 C1orf141Q5JVX7 400 aa33.34■■■□□ 2.93
TPM2-203ENST00000378292 HDGFL1Q5TGJ6 251 aa33.34■■■□□ 2.93
TPM2-203ENST00000378292 EIF4A1P60842 406 aaKnown RBP33.33■■■□□ 2.93
TPM2-203ENST00000378292 KDM3BQ7LBC6 1761 aa33.33■■■□□ 2.93
TPM2-203ENST00000378292 RNMTO43148 476 aaKnown RBP33.31■■■□□ 2.92
TPM2-203ENST00000378292 MFAP1P55081 439 aaKnown RBP33.3■■■□□ 2.92
TPM2-203ENST00000378292 BTBD11A6QL63 1104 aa33.29■■■□□ 2.92
TPM2-203ENST00000378292 TNS3Q68CZ2 1445 aa33.28■■■□□ 2.92
TPM2-203ENST00000378292 KCNQ3O43525 872 aa33.28■■■□□ 2.92
TPM2-203ENST00000378292 HOXB7P09629 217 aa33.28■■■□□ 2.92
TPM2-203ENST00000378292 OVOS2A0A0G2JMS6 1433 aa33.27■■■□□ 2.92
TPM2-203ENST00000378292 EIF2S2P20042 333 aaKnown RBP33.25■■■□□ 2.91
TPM2-203ENST00000378292 CABLES1Q8TDN4 633 aa33.25■■■□□ 2.91
TPM2-203ENST00000378292 C22orf23Q9BZE7 217 aa33.25■■■□□ 2.91
TPM2-203ENST00000378292 XIRP1Q702N8 1843 aaKnown RBP33.24■■■□□ 2.91
TPM2-203ENST00000378292 HMMRO75330 724 aa33.24■■■□□ 2.91
TPM2-203ENST00000378292 GNAI2P04899 355 aa33.24■■■□□ 2.91
TPM2-203ENST00000378292 BECN1Q14457 450 aa33.24■■■□□ 2.91
TPM2-203ENST00000378292 PHAXQ9H814 394 aaKnown RBP33.23■■■□□ 2.91
TPM2-203ENST00000378292 CHMP4AQ9BY43 222 aa33.23■■■□□ 2.91
TPM2-203ENST00000378292 NLRP2Q9NX02 1062 aa33.23■■■□□ 2.91
TPM2-203ENST00000378292 PXDNLA1KZ92 1463 aa33.22■■■□□ 2.91
TPM2-203ENST00000378292 PLEKHM2Q8IWE5 1019 aa33.22■■■□□ 2.91
TPM2-203ENST00000378292 GNAI3P08754 354 aa33.22■■■□□ 2.91
TPM2-203ENST00000378292 SPATA31A3Q5VYP0 1347 aa33.22■■■□□ 2.91
TPM2-203ENST00000378292 LMTK3Q96Q04 1460 aa33.21■■■□□ 2.91
TPM2-203ENST00000378292 COL18A1P39060 1754 aa33.21■■■□□ 2.91
TPM2-203ENST00000378292 N4BP2Q86UW6 1770 aaPredicted RBP33.21■■■□□ 2.91
TPM2-203ENST00000378292 RAPGEF4Q8WZA2 1011 aa33.2■■■□□ 2.91
TPM2-203ENST00000378292 CHPF2Q9P2E5 772 aa33.19■■■□□ 2.9
TPM2-203ENST00000378292 RTL5Q5HYW3 569 aaPredicted RBP33.19■■■□□ 2.9
TPM2-203ENST00000378292 STRCQ7RTU9 1775 aa33.18■■■□□ 2.9
TPM2-203ENST00000378292 C16orf71Q8IYS4 520 aaPredicted RBP33.18■■■□□ 2.9
TPM2-203ENST00000378292 BCL11AQ9H165 835 aa33.18■■■□□ 2.9
TPM2-203ENST00000378292 BRINP3Q76B58 766 aa33.17■■■□□ 2.9
TPM2-203ENST00000378292 CRYBG1Q9Y4K1 1723 aa33.16■■■□□ 2.9
TPM2-203ENST00000378292 KDM4FA0A1W2PPD8 638 aa33.16■■■□□ 2.9
TPM2-203ENST00000378292 APBB1O00213 710 aa33.16■■■□□ 2.9
TPM2-203ENST00000378292 CHRNA2Q15822 529 aa33.16■■■□□ 2.9
TPM2-203ENST00000378292 ADAMTS7Q9UKP4 1686 aa33.15■■■□□ 2.9
TPM2-203ENST00000378292 CSB-PGBD3P0DP91 1061 aa33.15■■■□□ 2.9
TPM2-203ENST00000378292 SMARCA5O60264 1052 aaPredicted RBP33.14■■■□□ 2.9
TPM2-203ENST00000378292 GSPT1P15170 499 aaKnown RBP33.14■■■□□ 2.9
TPM2-203ENST00000378292 SIPA1L3O60292 1781 aaPredicted RBP33.14■■■□□ 2.9
TPM2-203ENST00000378292 TATP17735 454 aaPredicted RBP33.14■■■□□ 2.9
TPM2-203ENST00000378292 USP44Q9H0E7 712 aa33.14■■■□□ 2.9
TPM2-203ENST00000378292 ABCC6O95255 1503 aa33.13■■■□□ 2.89
TPM2-203ENST00000378292 TBC1D9Q6ZT07 1266 aa33.13■■■□□ 2.89
TPM2-203ENST00000378292 OTUD7AQ8TE49 926 aaPredicted RBP33.13■■■□□ 2.89
TPM2-203ENST00000378292 TTC22Q5TAA0 569 aa33.12■■■□□ 2.89
TPM2-203ENST00000378292 HEG1Q9ULI3 1381 aa33.11■■■□□ 2.89
TPM2-203ENST00000378292 GIGYF1O75420 1035 aaPredicted RBP33.11■■■□□ 2.89
TPM2-203ENST00000378292 CPDO75976 1380 aa33.11■■■□□ 2.89
TPM2-203ENST00000378292 MEGF6O75095 1541 aa33.11■■■□□ 2.89
TPM2-203ENST00000378292 TBC1D2Q9BYX2 928 aa33.11■■■□□ 2.89
TPM2-203ENST00000378292 SPG7Q9UQ90 795 aa33.1■■■□□ 2.89
TPM2-203ENST00000378292 LRRFIP2Q9Y608 721 aaKnown RBP33.1■■■□□ 2.89
TPM2-203ENST00000378292 ATP8B2P98198 1209 aa33.1■■■□□ 2.89
TPM2-203ENST00000378292 SRCIN1Q9C0H9 1055 aa33.1■■■□□ 2.89
TPM2-203ENST00000378292 USP35Q9P2H5 1018 aa33.1■■■□□ 2.89
TPM2-203ENST00000378292 DBF4Q9UBU7 674 aaPredicted RBP33.1■■■□□ 2.89
TPM2-203ENST00000378292 CDC45O75419 566 aa33.09■■■□□ 2.89
TPM2-203ENST00000378292 ANXA1P04083 346 aa33.09■■■□□ 2.89
TPM2-203ENST00000378292 RBM25P49756 843 aaKnown RBP33.09■■■□□ 2.89
TPM2-203ENST00000378292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.09■■■□□ 2.892e-6■□□□□ 10.5
TPM2-203ENST00000378292 PNMA6EA0A0J9YXQ4 647 aa33.08■■■□□ 2.89
TPM2-203ENST00000378292 UBTFL1P0CB47 393 aaPredicted RBP33.08■■■□□ 2.89
TPM2-203ENST00000378292 ZNF335Q9H4Z2 1342 aaPredicted RBP33.08■■■□□ 2.89
TPM2-203ENST00000378292 PI4KAP2A4QPH2 592 aa33.07■■■□□ 2.88
TPM2-203ENST00000378292 PHKG2P15735 406 aa33.07■■■□□ 2.88
TPM2-203ENST00000378292 PI4KAP1Q8N8J0 262 aa33.07■■■□□ 2.88
TPM2-203ENST00000378292 DNAAF4Q8WXU2 420 aa33.07■■■□□ 2.88
TPM2-203ENST00000378292 EXOC6BQ9Y2D4 811 aa33.07■■■□□ 2.88
TPM2-203ENST00000378292 KDM6AO15550 1401 aaPredicted RBP33.06■■■□□ 2.88
TPM2-203ENST00000378292 SLAIN2Q9P270 581 aa33.05■■■□□ 2.88
TPM2-203ENST00000378292 SCN11AQ9UI33 1791 aa33.05■■■□□ 2.88
TPM2-203ENST00000378292 BEND3Q5T5X7 828 aa33.04■■■□□ 2.88
TPM2-203ENST00000378292 SLC52A2Q9HAB3 445 aa33.04■■■□□ 2.88
TPM2-203ENST00000378292 PRAMEF22A3QJZ6 481 aa33.04■■■□□ 2.88
TPM2-203ENST00000378292 PLEKHG2Q9H7P9 1386 aa33.03■■■□□ 2.88
TPM2-203ENST00000378292 IFNL2Q8IZJ0 200 aa33.03■■■□□ 2.88
TPM2-203ENST00000378292 ADCY9O60503 1353 aa33.03■■■□□ 2.88
TPM2-203ENST00000378292 NFKBIBQ15653 356 aa33.02■■■□□ 2.88
TPM2-203ENST00000378292 PROSER3Q2NL68 480 aa33.01■■■□□ 2.88
TPM2-203ENST00000378292 SOS2Q07890 1332 aaPredicted RBP33.01■■■□□ 2.87
TPM2-203ENST00000378292 ZNF790Q6PG37 636 aa33.01■■■□□ 2.87
TPM2-203ENST00000378292 LRRCC1Q9C099 1032 aa33■■■□□ 2.87
TPM2-203ENST00000378292 NFATC2IPQ8NCF5 419 aa32.99■■■□□ 2.87
TPM2-203ENST00000378292 IBTKQ9P2D0 1353 aaPredicted RBP32.99■■■□□ 2.87
TPM2-203ENST00000378292 SLC39A6Q13433 755 aa32.99■■■□□ 2.87
TPM2-203ENST00000378292 SDSP20132 328 aa32.98■■■□□ 2.87
TPM2-203ENST00000378292 SLKQ9H2G2 1235 aaPredicted RBP32.98■■■□□ 2.87
TPM2-203ENST00000378292 OSBPL3Q9H4L5 887 aa32.98■■■□□ 2.87
TPM2-203ENST00000378292 CYP27B1O15528 508 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms