RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 VAMP4O75379 141 aa19.41■□□□□ 0.7
LRRC47-201ENST00000378251 MSNP26038 577 aaKnown RBP19.41■□□□□ 0.7
LRRC47-201ENST00000378251 HSP90AA2PQ14568 343 aaPredicted RBP19.41■□□□□ 0.7
LRRC47-201ENST00000378251 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
LRRC47-201ENST00000378251 ARAP3Q8WWN8 1544 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 H3BQV1 296 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 CPLX1O14810 134 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 RALYLQ86SE5 291 aaKnown RBP19.4■□□□□ 0.7
LRRC47-201ENST00000378251 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 FOSBP53539 338 aa19.4■□□□□ 0.7
LRRC47-201ENST00000378251 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
LRRC47-201ENST00000378251 METTL24Q5JXM2 366 aa19.39■□□□□ 0.7
LRRC47-201ENST00000378251 ZNF652Q9Y2D9 606 aa19.39■□□□□ 0.7
LRRC47-201ENST00000378251 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
LRRC47-201ENST00000378251 SBNO2Q9Y2G9 1366 aa19.39■□□□□ 0.69
LRRC47-201ENST00000378251 ATP6V1AP38606 617 aa19.39■□□□□ 0.69
LRRC47-201ENST00000378251 NEK4P51957 841 aa19.39■□□□□ 0.69
LRRC47-201ENST00000378251 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 ZFYVE9O95405 1425 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 NPC1L1Q9UHC9 1359 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 NFXL1Q6ZNB6 911 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 PTPRCP08575 1304 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 RLBP1P12271 317 aa19.38■□□□□ 0.69
LRRC47-201ENST00000378251 AKAP17AQ02040 695 aaKnown RBP19.38■□□□□ 0.69
LRRC47-201ENST00000378251 DHX16O60231 1041 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 BCL11BQ9C0K0 894 aaPredicted RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 CPLX2Q6PUV4 134 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 KIF1BPQ96EK5 621 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 BOLA2Q9H3K6 86 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 KIF3AQ9Y496 699 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 KDM4AO75164 1064 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 ABCF2Q9UG63 623 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
LRRC47-201ENST00000378251 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
LRRC47-201ENST00000378251 IGHDP01880 384 aa19.36■□□□□ 0.69
LRRC47-201ENST00000378251 IFIT5Q13325 482 aaKnown RBP19.36■□□□□ 0.69
LRRC47-201ENST00000378251 RRP12Q5JTH9 1297 aaKnown RBP19.36■□□□□ 0.69
LRRC47-201ENST00000378251 PPP1R42Q7Z4L9 355 aa19.36■□□□□ 0.69
LRRC47-201ENST00000378251 TEX13AQ9BXU3 409 aaPredicted RBP19.36■□□□□ 0.69
LRRC47-201ENST00000378251 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
LRRC47-201ENST00000378251 ABCA9Q8IUA7 1624 aa19.36■□□□□ 0.69
LRRC47-201ENST00000378251 MAP3K5Q99683 1374 aa19.36■□□□□ 0.69
LRRC47-201ENST00000378251 FAM98CQ17RN3 349 aaKnown RBP19.36■□□□□ 0.69
LRRC47-201ENST00000378251 TSHZ3Q63HK5 1081 aa19.35■□□□□ 0.69
LRRC47-201ENST00000378251 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
LRRC47-201ENST00000378251 NLRP1Q9C000 1473 aa19.35■□□□□ 0.69
LRRC47-201ENST00000378251 AK7Q96M32 723 aa19.35■□□□□ 0.69
LRRC47-201ENST00000378251 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
LRRC47-201ENST00000378251 VPS37CA5D8V6 355 aaPredicted RBP19.35■□□□□ 0.69
LRRC47-201ENST00000378251 IDH1O75874 414 aaKnown RBP19.35■□□□□ 0.69
LRRC47-201ENST00000378251 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
LRRC47-201ENST00000378251 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
LRRC47-201ENST00000378251 ARHGAP31Q2M1Z3 1444 aa19.34■□□□□ 0.69
LRRC47-201ENST00000378251 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
LRRC47-201ENST00000378251 CDK11BP21127 795 aaKnown RBP19.34■□□□□ 0.69
LRRC47-201ENST00000378251 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
LRRC47-201ENST00000378251 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
LRRC47-201ENST00000378251 A2ML1A8K2U0 1454 aa19.33■□□□□ 0.69
LRRC47-201ENST00000378251 CHAF1AQ13111 956 aaPredicted RBP19.33■□□□□ 0.69
LRRC47-201ENST00000378251 GNL3LQ9NVN8 582 aaKnown RBP19.33■□□□□ 0.69
LRRC47-201ENST00000378251 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.68
LRRC47-201ENST00000378251 G2E3Q7L622 706 aa19.33■□□□□ 0.68
LRRC47-201ENST00000378251 ARID3AQ99856 593 aa19.33■□□□□ 0.68
LRRC47-201ENST00000378251 PLXNC1O60486 1568 aa19.33■□□□□ 0.68
LRRC47-201ENST00000378251 VPS53Q5VIR6 699 aa19.33■□□□□ 0.68
LRRC47-201ENST00000378251 CWC25Q9NXE8 425 aaPredicted RBP19.33■□□□□ 0.68
LRRC47-201ENST00000378251 MX1P20591 662 aa19.32■□□□□ 0.68
LRRC47-201ENST00000378251 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
LRRC47-201ENST00000378251 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
LRRC47-201ENST00000378251 BRPF3Q9ULD4 1205 aa19.32■□□□□ 0.68
LRRC47-201ENST00000378251 RFC4P35249 363 aa19.31■□□□□ 0.68
LRRC47-201ENST00000378251 MYOM2P54296 1465 aa19.31■□□□□ 0.68
LRRC47-201ENST00000378251 ERICH2A1L162 156 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
LRRC47-201ENST00000378251 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 LRP2BPQ9P2M1 347 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 MARCH6O60337 910 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 CHMP4CQ96CF2 233 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 SMC3Q9UQE7 1217 aa19.3■□□□□ 0.68
LRRC47-201ENST00000378251 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 LRRIQ1Q96JM4 1722 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 RAI14Q9P0K7 980 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 TET3O43151 1660 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 ARHGEF10O15013 1369 aa19.29■□□□□ 0.68
LRRC47-201ENST00000378251 WWC3Q9ULE0 1092 aa19.28■□□□□ 0.68
LRRC47-201ENST00000378251 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
LRRC47-201ENST00000378251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.28■□□□□ 0.68
LRRC47-201ENST00000378251 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
LRRC47-201ENST00000378251 PCDH11XQ9BZA7 1347 aa19.28■□□□□ 0.68
LRRC47-201ENST00000378251 PCDH11YQ9BZA8 1340 aa19.28■□□□□ 0.68
LRRC47-201ENST00000378251 KIF1BO60333 1816 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms