RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
BEST1-201ENST00000378043 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
BEST1-201ENST00000378043 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
BEST1-201ENST00000378043 KCNA6P17658 529 aa13.46□□□□□ -0.25
BEST1-201ENST00000378043 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.25
BEST1-201ENST00000378043 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
BEST1-201ENST00000378043 BAG4O95429 457 aaKnown RBP13.46□□□□□ -0.26
BEST1-201ENST00000378043 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.26
BEST1-201ENST00000378043 FKBP5Q13451 457 aaPredicted RBP13.46□□□□□ -0.26
BEST1-201ENST00000378043 PKP1Q13835 747 aa13.46□□□□□ -0.26
BEST1-201ENST00000378043 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.26
BEST1-201ENST00000378043 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.26
BEST1-201ENST00000378043 CASC1Q6TDU7 716 aa13.46□□□□□ -0.26
BEST1-201ENST00000378043 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.26
BEST1-201ENST00000378043 ERC2O15083 957 aa13.45□□□□□ -0.26
BEST1-201ENST00000378043 ISY1Q9ULR0 285 aaKnown RBP13.45□□□□□ -0.26
BEST1-201ENST00000378043 REC8O95072 547 aa13.45□□□□□ -0.26
BEST1-201ENST00000378043 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
BEST1-201ENST00000378043 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
BEST1-201ENST00000378043 FER1L4A9Z1Z3 1794 aa13.44□□□□□ -0.26
BEST1-201ENST00000378043 ATP8B2P98198 1209 aa13.44□□□□□ -0.26
BEST1-201ENST00000378043 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
BEST1-201ENST00000378043 GNAI3P08754 354 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 ZGPATQ8N5A5 531 aaKnown RBP13.43□□□□□ -0.26
BEST1-201ENST00000378043 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
BEST1-201ENST00000378043 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
BEST1-201ENST00000378043 PTMSP20962 102 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
BEST1-201ENST00000378043 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 LTN1O94822 1766 aa13.43□□□□□ -0.26
BEST1-201ENST00000378043 LRRFIP2Q9Y608 721 aaKnown RBP13.42□□□□□ -0.26
BEST1-201ENST00000378043 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
BEST1-201ENST00000378043 ST18O60284 1047 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 MX1P20591 662 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 NUCB2P80303 420 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 SOS1Q07889 1333 aaPredicted RBP13.41□□□□□ -0.26
BEST1-201ENST00000378043 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
BEST1-201ENST00000378043 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
BEST1-201ENST00000378043 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
BEST1-201ENST00000378043 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
BEST1-201ENST00000378043 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
BEST1-201ENST00000378043 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
BEST1-201ENST00000378043 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.27
BEST1-201ENST00000378043 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.27
BEST1-201ENST00000378043 DDX49Q9Y6V7 483 aaKnown RBP13.4□□□□□ -0.27
BEST1-201ENST00000378043 CHMLP26374 656 aa13.39□□□□□ -0.27
BEST1-201ENST00000378043 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
BEST1-201ENST00000378043 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
BEST1-201ENST00000378043 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
BEST1-201ENST00000378043 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
BEST1-201ENST00000378043 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
BEST1-201ENST00000378043 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
BEST1-201ENST00000378043 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
BEST1-201ENST00000378043 NEK4P51957 841 aa13.38□□□□□ -0.27
BEST1-201ENST00000378043 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
BEST1-201ENST00000378043 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
BEST1-201ENST00000378043 NFAT5O94916 1531 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 UBTFL1P0CB47 393 aaPredicted RBP13.37□□□□□ -0.27
BEST1-201ENST00000378043 IL25Q9H293 177 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 IP6K1Q92551 441 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 IL1RAPL2Q9NP60 686 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 PHF8Q9UPP1 1060 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
BEST1-201ENST00000378043 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
BEST1-201ENST00000378043 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
BEST1-201ENST00000378043 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
BEST1-201ENST00000378043 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
BEST1-201ENST00000378043 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
BEST1-201ENST00000378043 CLCN1P35523 988 aa13.36□□□□□ -0.27
BEST1-201ENST00000378043 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
BEST1-201ENST00000378043 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
BEST1-201ENST00000378043 KCNQ3O43525 872 aa13.35□□□□□ -0.27
BEST1-201ENST00000378043 POLA2Q14181 598 aa13.35□□□□□ -0.27
BEST1-201ENST00000378043 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
BEST1-201ENST00000378043 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
BEST1-201ENST00000378043 IL17RAQ96F46 866 aa13.35□□□□□ -0.27
BEST1-201ENST00000378043 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
BEST1-201ENST00000378043 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
BEST1-201ENST00000378043 AOX1Q06278 1338 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 ZNF445P59923 1031 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 ANAPC15P60006 121 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
BEST1-201ENST00000378043 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
BEST1-201ENST00000378043 CUL4AQ13619 759 aa13.33□□□□□ -0.27
BEST1-201ENST00000378043 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
BEST1-201ENST00000378043 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
BEST1-201ENST00000378043 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
BEST1-201ENST00000378043 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
BEST1-201ENST00000378043 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms