RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ZNF853P0CG23 659 aa27.83■■■□□ 2.05
CBWD3-202ENST00000377342 BTAF1O14981 1849 aa27.82■■■□□ 2.04
CBWD3-202ENST00000377342 CALD1Q05682 793 aaKnown RBP27.82■■■□□ 2.04
CBWD3-202ENST00000377342 TEFQ10587 303 aa27.82■■■□□ 2.04
CBWD3-202ENST00000377342 IFT57Q9NWB7 429 aa27.81■■■□□ 2.04
CBWD3-202ENST00000377342 NFATC2IPQ8NCF5 419 aa27.8■■■□□ 2.04
CBWD3-202ENST00000377342 ACSBG1Q96GR2 724 aa27.8■■■□□ 2.04
CBWD3-202ENST00000377342 CFAP44Q96MT7 982 aa27.8■■■□□ 2.04
CBWD3-202ENST00000377342 CABP4P57796 275 aa27.79■■■□□ 2.04
CBWD3-202ENST00000377342 SLFN5Q08AF3 891 aa27.79■■■□□ 2.04
CBWD3-202ENST00000377342 TAF7Q15545 349 aaPredicted RBP27.78■■■□□ 2.04
CBWD3-202ENST00000377342 CHL1O00533 1208 aa27.78■■■□□ 2.04
CBWD3-202ENST00000377342 PRIM1P49642 420 aaKnown RBP27.78■■■□□ 2.04
CBWD3-202ENST00000377342 MIS18AQ9NYP9 233 aa27.78■■■□□ 2.04
CBWD3-202ENST00000377342 FANCIQ9NVI1 1328 aa27.78■■■□□ 2.04
CBWD3-202ENST00000377342 E9PSI1 815 aa27.77■■■□□ 2.04
CBWD3-202ENST00000377342 GNAI1P63096 354 aa27.77■■■□□ 2.04
CBWD3-202ENST00000377342 TRMT2AQ8IZ69 625 aaKnown RBP27.77■■■□□ 2.04
CBWD3-202ENST00000377342 TSR2Q969E8 191 aaKnown RBP27.77■■■□□ 2.04
CBWD3-202ENST00000377342 MBIPQ9NS73 344 aa27.77■■■□□ 2.04
CBWD3-202ENST00000377342 TMOD3Q9NYL9 352 aa27.77■■■□□ 2.04
CBWD3-202ENST00000377342 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
CBWD3-202ENST00000377342 KCNQ2O43526 872 aa27.76■■■□□ 2.03
CBWD3-202ENST00000377342 TNS1Q9HBL0 1735 aaKnown RBP27.75■■■□□ 2.03
CBWD3-202ENST00000377342 KCPQ6ZWJ8 1503 aa27.75■■■□□ 2.03
CBWD3-202ENST00000377342 PIGBQ92521 554 aa27.75■■■□□ 2.03
CBWD3-202ENST00000377342 DUSP27Q5VZP5 1158 aa27.75■■■□□ 2.03
CBWD3-202ENST00000377342 FAM196AQ6ZSG2 479 aa27.75■■■□□ 2.03
CBWD3-202ENST00000377342 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
CBWD3-202ENST00000377342 SYTL4Q96C24 671 aaPredicted RBP27.75■■■□□ 2.03
CBWD3-202ENST00000377342 BTBD11A6QL63 1104 aa27.74■■■□□ 2.03
CBWD3-202ENST00000377342 BABAM1Q9NWV8 329 aa27.74■■■□□ 2.03
CBWD3-202ENST00000377342 TSPYL4Q9UJ04 414 aa27.74■■■□□ 2.03
CBWD3-202ENST00000377342 C5P01031 1676 aa27.73■■■□□ 2.03
CBWD3-202ENST00000377342 MYH16Q9H6N6 1097 aa27.72■■■□□ 2.03
CBWD3-202ENST00000377342 KCNQ3O43525 872 aa27.72■■■□□ 2.03
CBWD3-202ENST00000377342 SLC39A6Q13433 755 aa27.72■■■□□ 2.03
CBWD3-202ENST00000377342 LY75O60449 1722 aa27.69■■■□□ 2.02
CBWD3-202ENST00000377342 ZNF790Q6PG37 636 aa27.68■■■□□ 2.02
CBWD3-202ENST00000377342 ATG3Q9NT62 314 aa27.68■■■□□ 2.02
CBWD3-202ENST00000377342 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
CBWD3-202ENST00000377342 LAMB4A4D0S4 1761 aa27.67■■■□□ 2.02
CBWD3-202ENST00000377342 CICQ96RK0 1608 aaPredicted RBP27.67■■■□□ 2.02
CBWD3-202ENST00000377342 KRT24Q2M2I5 525 aa27.66■■■□□ 2.02
CBWD3-202ENST00000377342 TJP1Q07157 1748 aa27.66■■■□□ 2.02
CBWD3-202ENST00000377342 HEG1Q9ULI3 1381 aa27.65■■■□□ 2.02
CBWD3-202ENST00000377342 EIF4A1P60842 406 aaKnown RBP27.65■■■□□ 2.02
CBWD3-202ENST00000377342 BCL11BQ9C0K0 894 aaPredicted RBP27.65■■■□□ 2.02
CBWD3-202ENST00000377342 ZNF831Q5JPB2 1677 aa27.64■■■□□ 2.02
CBWD3-202ENST00000377342 TRIM37O94972 964 aa27.64■■■□□ 2.02
CBWD3-202ENST00000377342 EXOSC9Q06265 439 aaKnown RBP27.63■■■□□ 2.01
CBWD3-202ENST00000377342 ZNF496Q96IT1 587 aaPredicted RBP27.63■■■□□ 2.01
CBWD3-202ENST00000377342 PALLDQ8WX93 1383 aa27.62■■■□□ 2.01
CBWD3-202ENST00000377342 TTC5Q8N0Z6 440 aa27.62■■■□□ 2.01
CBWD3-202ENST00000377342 C8orf58Q8NAV2 365 aa27.62■■■□□ 2.01
CBWD3-202ENST00000377342 RGPD3A6NKT7 1758 aaPredicted RBP27.61■■■□□ 2.01
CBWD3-202ENST00000377342 RGPD4Q7Z3J3 1758 aa27.61■■■□□ 2.01
CBWD3-202ENST00000377342 TSPYL6Q8N831 410 aa27.6■■■□□ 2.01
CBWD3-202ENST00000377342 COL5A3P25940 1745 aaPredicted RBP27.59■■■□□ 2.01
CBWD3-202ENST00000377342 FMNL2Q96PY5 1086 aa27.58■■■□□ 2.01
CBWD3-202ENST00000377342 PTCD1O75127 700 aaKnown RBP27.57■■■□□ 2
CBWD3-202ENST00000377342 SLC4A9Q96Q91 983 aa27.57■■■□□ 2
CBWD3-202ENST00000377342 TAF1LQ8IZX4 1826 aa27.57■■■□□ 2
CBWD3-202ENST00000377342 PRAMEF22A3QJZ6 481 aa27.56■■■□□ 2
CBWD3-202ENST00000377342 SMARCC1Q92922 1105 aaPredicted RBP27.56■■■□□ 2
CBWD3-202ENST00000377342 ELL2O00472 640 aaPredicted RBP27.55■■■□□ 2
CBWD3-202ENST00000377342 GIGYF1O75420 1035 aaPredicted RBP27.55■■■□□ 2
CBWD3-202ENST00000377342 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
CBWD3-202ENST00000377342 VAMP4O75379 141 aa27.52■■■□□ 2
CBWD3-202ENST00000377342 RBM42Q9BTD8 480 aaKnown RBP27.52■■■□□ 2
CBWD3-202ENST00000377342 LOC102724428A0A0B4J2F2 783 aa27.52■■■□□ 2
CBWD3-202ENST00000377342 SIK1P57059 783 aa27.52■■■□□ 2
CBWD3-202ENST00000377342 RREB1Q92766 1687 aa27.52■■■□□ 2
CBWD3-202ENST00000377342 HOXB7P09629 217 aa27.51■■□□□ 1.99
CBWD3-202ENST00000377342 SOS1Q07889 1333 aaPredicted RBP27.5■■□□□ 1.99
CBWD3-202ENST00000377342 SNRPA1P09661 255 aaKnown RBP27.5■■□□□ 1.99
CBWD3-202ENST00000377342 VSIG10Q8N0Z9 540 aa27.5■■□□□ 1.99
CBWD3-202ENST00000377342 CT47B1P0C2W7 299 aaPredicted RBP27.49■■□□□ 1.99
CBWD3-202ENST00000377342 MYH14Q7Z406 1995 aaKnown RBP27.48■■□□□ 1.99
CBWD3-202ENST00000377342 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
CBWD3-202ENST00000377342 ITPK1Q13572 414 aa27.48■■□□□ 1.99
CBWD3-202ENST00000377342 APBA3O96018 575 aa27.47■■□□□ 1.99
CBWD3-202ENST00000377342 DNAJC10Q8IXB1 793 aa27.47■■□□□ 1.99
CBWD3-202ENST00000377342 USP16Q9Y5T5 823 aa27.46■■□□□ 1.99
CBWD3-202ENST00000377342 PLSCR1O15162 318 aa27.45■■□□□ 1.98
CBWD3-202ENST00000377342 ATP6V1AP38606 617 aa27.45■■□□□ 1.98
CBWD3-202ENST00000377342 KCNQ4P56696 695 aa27.45■■□□□ 1.98
CBWD3-202ENST00000377342 ILDR2Q71H61 639 aa27.45■■□□□ 1.98
CBWD3-202ENST00000377342 HDGFL1Q5TGJ6 251 aa27.44■■□□□ 1.98
CBWD3-202ENST00000377342 C4BP0C0L5 1744 aa27.44■■□□□ 1.98
CBWD3-202ENST00000377342 CCNL1Q9UK58 526 aaPredicted RBP27.43■■□□□ 1.98
CBWD3-202ENST00000377342 NECTIN2Q92692 538 aa27.43■■□□□ 1.98
CBWD3-202ENST00000377342 NUP188Q5SRE5 1749 aa27.42■■□□□ 1.98
CBWD3-202ENST00000377342 EIF2S2P20042 333 aaKnown RBP27.42■■□□□ 1.98
CBWD3-202ENST00000377342 RARSP54136 660 aaKnown RBP27.42■■□□□ 1.98
CBWD3-202ENST00000377342 PROM2Q8N271 834 aa27.42■■□□□ 1.98
CBWD3-202ENST00000377342 ZNF428Q96B54 188 aa27.42■■□□□ 1.98
CBWD3-202ENST00000377342 LRRC4BQ9NT99 713 aa27.42■■□□□ 1.98
CBWD3-202ENST00000377342 TCERG1O14776 1098 aaKnown RBP27.41■■□□□ 1.98
CBWD3-202ENST00000377342 CYP19A1P11511 503 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms