RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 MBIPQ9NS73 344 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
FXN-201ENST00000377270 SKOR2Q2VWA4 1001 aaPredicted RBP18.94■□□□□ 0.62
FXN-201ENST00000377270 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
FXN-201ENST00000377270 ZNF853P0CG23 659 aa18.94■□□□□ 0.62
FXN-201ENST00000377270 EIF4A2Q14240 407 aaKnown RBP18.93■□□□□ 0.62
FXN-201ENST00000377270 HSCBQ8IWL3 235 aa18.93■□□□□ 0.62
FXN-201ENST00000377270 BRPF1P55201 1214 aaPredicted RBP18.92■□□□□ 0.62
FXN-201ENST00000377270 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 SULT6B1Q6IMI4 303 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 MYRIPQ8NFW9 859 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 CFAP44Q96MT7 982 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 DDIT3P35638 169 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 HS1BP3Q53T59 392 aa18.92■□□□□ 0.62
FXN-201ENST00000377270 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
FXN-201ENST00000377270 CCDC66A2RUB6 948 aa18.91■□□□□ 0.62
FXN-201ENST00000377270 TULP2O00295 520 aa18.91■□□□□ 0.62
FXN-201ENST00000377270 USP6P35125 1406 aa18.91■□□□□ 0.62
FXN-201ENST00000377270 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
FXN-201ENST00000377270 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
FXN-201ENST00000377270 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
FXN-201ENST00000377270 GBP4Q96PP9 640 aa18.9■□□□□ 0.62
FXN-201ENST00000377270 CARD10Q9BWT7 1032 aa18.9■□□□□ 0.62
FXN-201ENST00000377270 TNPO1Q92973 898 aaKnown RBP18.9■□□□□ 0.62
FXN-201ENST00000377270 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.62
FXN-201ENST00000377270 THEMISQ8N1K5 641 aaPredicted RBP18.89■□□□□ 0.62
FXN-201ENST00000377270 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.62
FXN-201ENST00000377270 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
FXN-201ENST00000377270 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
FXN-201ENST00000377270 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
FXN-201ENST00000377270 DLG5Q8TDM6 1919 aa18.88■□□□□ 0.61
FXN-201ENST00000377270 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
FXN-201ENST00000377270 SMC5Q8IY18 1101 aa18.88■□□□□ 0.61
FXN-201ENST00000377270 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
FXN-201ENST00000377270 KIF3AQ9Y496 699 aa18.87■□□□□ 0.61
FXN-201ENST00000377270 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
FXN-201ENST00000377270 CIZ1Q9ULV3 898 aaPredicted RBP18.87■□□□□ 0.61
FXN-201ENST00000377270 SLIT1O75093 1534 aa18.87■□□□□ 0.61
FXN-201ENST00000377270 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
FXN-201ENST00000377270 ARHGAP23Q9P227 1491 aa18.86■□□□□ 0.61
FXN-201ENST00000377270 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
FXN-201ENST00000377270 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
FXN-201ENST00000377270 TICAM2Q86XR7 235 aa18.85■□□□□ 0.61
FXN-201ENST00000377270 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 U2AF2P26368 475 aaKnown RBP eCLIP18.84■□□□□ 0.61
FXN-201ENST00000377270 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 BANK1Q8NDB2 785 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.84■□□□□ 0.61
FXN-201ENST00000377270 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
FXN-201ENST00000377270 FAM177BA6PVY3 158 aa18.83■□□□□ 0.61
FXN-201ENST00000377270 MCM10Q7L590 875 aa18.83■□□□□ 0.61
FXN-201ENST00000377270 FBXO3Q9UK99 471 aa18.83■□□□□ 0.61
FXN-201ENST00000377270 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
FXN-201ENST00000377270 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
FXN-201ENST00000377270 PHF14O94880 888 aa18.83■□□□□ 0.6
FXN-201ENST00000377270 EFCC1Q9HA90 598 aa18.83■□□□□ 0.6
FXN-201ENST00000377270 MAP3K19Q56UN5 1328 aa18.82■□□□□ 0.6
FXN-201ENST00000377270 EGFL6Q8IUX8 553 aa18.82■□□□□ 0.6
FXN-201ENST00000377270 SNX21Q969T3 373 aa18.82■□□□□ 0.6
FXN-201ENST00000377270 C1orf115Q9H7X2 142 aa18.82■□□□□ 0.6
FXN-201ENST00000377270 GABPB1Q06547 395 aaPredicted RBP18.82■□□□□ 0.6
FXN-201ENST00000377270 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
FXN-201ENST00000377270 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
FXN-201ENST00000377270 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
FXN-201ENST00000377270 FER1L4A9Z1Z3 1794 aa18.81■□□□□ 0.6
FXN-201ENST00000377270 NUCB1Q02818 461 aa18.81■□□□□ 0.6
FXN-201ENST00000377270 PEAK1Q9H792 1746 aa18.81■□□□□ 0.6
FXN-201ENST00000377270 ABCC4O15439 1325 aa18.81■□□□□ 0.6
FXN-201ENST00000377270 API5Q9BZZ5 524 aaKnown RBP18.81■□□□□ 0.6
FXN-201ENST00000377270 SLFN14P0C7P3 912 aa18.8■□□□□ 0.6
FXN-201ENST00000377270 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
FXN-201ENST00000377270 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
FXN-201ENST00000377270 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 CHL1O00533 1208 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 MCM5P33992 734 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
FXN-201ENST00000377270 KRT24Q2M2I5 525 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 NALCNQ8IZF0 1738 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 KCNA6P17658 529 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 TRERF1Q96PN7 1200 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
FXN-201ENST00000377270 AMPHP49418 695 aa18.78■□□□□ 0.6
FXN-201ENST00000377270 CALCOCO1Q9P1Z2 691 aa18.78■□□□□ 0.6
FXN-201ENST00000377270 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
FXN-201ENST00000377270 RGPD8O14715 1765 aaPredicted RBP18.77■□□□□ 0.6
FXN-201ENST00000377270 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
FXN-201ENST00000377270 TNNT3P45378 269 aaPredicted RBP18.77■□□□□ 0.6
FXN-201ENST00000377270 NLRP6P59044 892 aa18.77■□□□□ 0.6
FXN-201ENST00000377270 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.6
FXN-201ENST00000377270 SBNO1A3KN83 1393 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 MCCP23508 829 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
FXN-201ENST00000377270 PRIMPOLQ96LW4 560 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 FLT4P35916 1363 aa18.76■□□□□ 0.59
FXN-201ENST00000377270 FOXO3O43524 673 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms