RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 ZNF853P0CG23 659 aa22.43■■□□□ 1.18
DFFA-201ENST00000377036 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
DFFA-201ENST00000377036 SCN11AQ9UI33 1791 aa22.42■■□□□ 1.18
DFFA-201ENST00000377036 TSPYL4Q9UJ04 414 aa22.42■■□□□ 1.18
DFFA-201ENST00000377036 FAM182BQ5T319 152 aa22.41■■□□□ 1.18
DFFA-201ENST00000377036 TTC5Q8N0Z6 440 aa22.41■■□□□ 1.18
DFFA-201ENST00000377036 PIGBQ92521 554 aa22.41■■□□□ 1.18
DFFA-201ENST00000377036 SMARCC1Q92922 1105 aaPredicted RBP22.41■■□□□ 1.18
DFFA-201ENST00000377036 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
DFFA-201ENST00000377036 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
DFFA-201ENST00000377036 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
DFFA-201ENST00000377036 BRWD3Q6RI45 1802 aa22.39■■□□□ 1.17
DFFA-201ENST00000377036 ZNF790Q6PG37 636 aa22.39■■□□□ 1.17
DFFA-201ENST00000377036 HMGB2P26583 209 aaKnown RBP22.38■■□□□ 1.17
DFFA-201ENST00000377036 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
DFFA-201ENST00000377036 KCNQ2O43526 872 aa22.37■■□□□ 1.17
DFFA-201ENST00000377036 CHMP4AQ9BY43 222 aa22.37■■□□□ 1.17
DFFA-201ENST00000377036 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
DFFA-201ENST00000377036 TRMT2AQ8IZ69 625 aaKnown RBP22.36■■□□□ 1.17
DFFA-201ENST00000377036 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
DFFA-201ENST00000377036 TOGARAM1Q9Y4F4 1720 aa22.36■■□□□ 1.17
DFFA-201ENST00000377036 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
DFFA-201ENST00000377036 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
DFFA-201ENST00000377036 TRIM37O94972 964 aa22.35■■□□□ 1.17
DFFA-201ENST00000377036 CCDC125Q86Z20 511 aa22.35■■□□□ 1.17
DFFA-201ENST00000377036 FMNL2Q96PY5 1086 aa22.34■■□□□ 1.17
DFFA-201ENST00000377036 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
DFFA-201ENST00000377036 MIS18AQ9NYP9 233 aa22.34■■□□□ 1.17
DFFA-201ENST00000377036 CDCA7LQ96GN5 454 aa22.33■■□□□ 1.17
DFFA-201ENST00000377036 CT47B1P0C2W7 299 aaPredicted RBP22.32■■□□□ 1.16
DFFA-201ENST00000377036 VSIG10Q8N0Z9 540 aa22.32■■□□□ 1.16
DFFA-201ENST00000377036 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
DFFA-201ENST00000377036 ASAP1Q9ULH1 1129 aa22.32■■□□□ 1.16
DFFA-201ENST00000377036 HOXB7P09629 217 aa22.31■■□□□ 1.16
DFFA-201ENST00000377036 EIF4A1P60842 406 aaKnown RBP22.31■■□□□ 1.16
DFFA-201ENST00000377036 SF3B2Q13435 895 aaKnown RBP22.31■■□□□ 1.16
DFFA-201ENST00000377036 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
DFFA-201ENST00000377036 SIPA1L3O60292 1781 aaPredicted RBP22.31■■□□□ 1.16
DFFA-201ENST00000377036 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
DFFA-201ENST00000377036 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
DFFA-201ENST00000377036 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
DFFA-201ENST00000377036 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
DFFA-201ENST00000377036 PLSCR1O15162 318 aa22.29■■□□□ 1.16
DFFA-201ENST00000377036 SNRPA1P09661 255 aaKnown RBP22.29■■□□□ 1.16
DFFA-201ENST00000377036 ZNF496Q96IT1 587 aaPredicted RBP22.29■■□□□ 1.16
DFFA-201ENST00000377036 ITGB4P16144 1822 aa22.28■■□□□ 1.16
DFFA-201ENST00000377036 ZNF428Q96B54 188 aa22.28■■□□□ 1.16
DFFA-201ENST00000377036 HEG1Q9ULI3 1381 aa22.28■■□□□ 1.16
DFFA-201ENST00000377036 VIRMAQ69YN4 1812 aaKnown RBP22.27■■□□□ 1.16
DFFA-201ENST00000377036 KCNQ3O43525 872 aa22.27■■□□□ 1.16
DFFA-201ENST00000377036 PTCD1O75127 700 aaKnown RBP22.27■■□□□ 1.16
DFFA-201ENST00000377036 PAPPAQ13219 1627 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 LOC102724428A0A0B4J2F2 783 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 APBA3O96018 575 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 SIK1P57059 783 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
DFFA-201ENST00000377036 SBF2Q86WG5 1849 aa22.26■■□□□ 1.15
DFFA-201ENST00000377036 GIGYF1O75420 1035 aaPredicted RBP22.25■■□□□ 1.15
DFFA-201ENST00000377036 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
DFFA-201ENST00000377036 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
DFFA-201ENST00000377036 TWISTNBQ3B726 338 aaPredicted RBP22.24■■□□□ 1.15
DFFA-201ENST00000377036 KCPQ6ZWJ8 1503 aa22.24■■□□□ 1.15
DFFA-201ENST00000377036 KAT6BQ8WYB5 2073 aa22.24■■□□□ 1.15
DFFA-201ENST00000377036 STARD3NLO95772 234 aa22.23■■□□□ 1.15
DFFA-201ENST00000377036 BAG6P46379 1132 aa22.23■■□□□ 1.15
DFFA-201ENST00000377036 C8orf58Q8NAV2 365 aa22.23■■□□□ 1.15
DFFA-201ENST00000377036 BTAF1O14981 1849 aa22.22■■□□□ 1.15
DFFA-201ENST00000377036 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
DFFA-201ENST00000377036 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
DFFA-201ENST00000377036 UBR2Q8IWV8 1755 aa22.21■■□□□ 1.15
DFFA-201ENST00000377036 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
DFFA-201ENST00000377036 VAMP4O75379 141 aa22.19■■□□□ 1.14
DFFA-201ENST00000377036 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
DFFA-201ENST00000377036 EP400Q96L91 3159 aa22.18■■□□□ 1.14
DFFA-201ENST00000377036 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
DFFA-201ENST00000377036 HDGFL1Q5TGJ6 251 aa22.18■■□□□ 1.14
DFFA-201ENST00000377036 TSPYL6Q8N831 410 aa22.18■■□□□ 1.14
DFFA-201ENST00000377036 ZNF831Q5JPB2 1677 aa22.18■■□□□ 1.14
DFFA-201ENST00000377036 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
DFFA-201ENST00000377036 TXNRD1Q16881 649 aa22.17■■□□□ 1.14
DFFA-201ENST00000377036 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
DFFA-201ENST00000377036 STK31Q9BXU1 1019 aa22.17■■□□□ 1.14
DFFA-201ENST00000377036 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
DFFA-201ENST00000377036 DNAJC10Q8IXB1 793 aa22.16■■□□□ 1.14
DFFA-201ENST00000377036 SLC4A9Q96Q91 983 aa22.16■■□□□ 1.14
DFFA-201ENST00000377036 TNS1Q9HBL0 1735 aaKnown RBP22.15■■□□□ 1.14
DFFA-201ENST00000377036 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
DFFA-201ENST00000377036 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
DFFA-201ENST00000377036 CYP19A1P11511 503 aaPredicted RBP22.14■■□□□ 1.14
DFFA-201ENST00000377036 RC3H1Q5TC82 1133 aaKnown RBP22.14■■□□□ 1.14
DFFA-201ENST00000377036 CAMKK2Q96RR4 588 aa22.14■■□□□ 1.14
DFFA-201ENST00000377036 DBF4Q9UBU7 674 aaPredicted RBP22.14■■□□□ 1.14
DFFA-201ENST00000377036 CICQ96RK0 1608 aaPredicted RBP22.14■■□□□ 1.14
DFFA-201ENST00000377036 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
DFFA-201ENST00000377036 UPF1Q92900 1129 aaKnown RBP eCLIP22.14■■□□□ 1.13
DFFA-201ENST00000377036 USP16Q9Y5T5 823 aa22.14■■□□□ 1.13
DFFA-201ENST00000377036 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
DFFA-201ENST00000377036 ITPK1Q13572 414 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms