RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 BCL11AQ9H165 835 aa25.2■■□□□ 1.62
VSX1-202ENST00000376709 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
VSX1-202ENST00000376709 STRCQ7RTU9 1775 aa25.19■■□□□ 1.62
VSX1-202ENST00000376709 TBC1D2Q9BYX2 928 aa25.18■■□□□ 1.62
VSX1-202ENST00000376709 XIRP1Q702N8 1843 aaKnown RBP25.18■■□□□ 1.62
VSX1-202ENST00000376709 NPHP3Q7Z494 1330 aa25.18■■□□□ 1.62
VSX1-202ENST00000376709 HMMRO75330 724 aa25.17■■□□□ 1.62
VSX1-202ENST00000376709 NCAPD2Q15021 1401 aa25.16■■□□□ 1.62
VSX1-202ENST00000376709 PLEKHO1Q53GL0 409 aaPredicted RBP25.16■■□□□ 1.62
VSX1-202ENST00000376709 HDGFL1Q5TGJ6 251 aa25.16■■□□□ 1.62
VSX1-202ENST00000376709 ZNF530Q6P9A1 599 aaPredicted RBP25.16■■□□□ 1.62
VSX1-202ENST00000376709 LGR6Q9HBX8 967 aa25.16■■□□□ 1.62
VSX1-202ENST00000376709 SLKQ9H2G2 1235 aaPredicted RBP25.15■■□□□ 1.62
VSX1-202ENST00000376709 LMO7Q8WWI1 1683 aa25.15■■□□□ 1.62
VSX1-202ENST00000376709 AKAP4Q5JQC9 854 aa25.15■■□□□ 1.62
VSX1-202ENST00000376709 PLEKHM2Q8IWE5 1019 aa25.15■■□□□ 1.62
VSX1-202ENST00000376709 RGPD5Q99666 1765 aa25.15■■□□□ 1.62
VSX1-202ENST00000376709 APBB1O00213 710 aa25.14■■□□□ 1.61
VSX1-202ENST00000376709 TEFQ10587 303 aa25.14■■□□□ 1.61
VSX1-202ENST00000376709 AMOTQ4VCS5 1084 aa25.14■■□□□ 1.61
VSX1-202ENST00000376709 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
VSX1-202ENST00000376709 CAMTA1Q9Y6Y1 1673 aa25.13■■□□□ 1.61
VSX1-202ENST00000376709 GNAI2P04899 355 aa25.13■■□□□ 1.61
VSX1-202ENST00000376709 TBC1D9Q6ZT07 1266 aa25.13■■□□□ 1.61
VSX1-202ENST00000376709 PXDNQ92626 1479 aa25.13■■□□□ 1.61
VSX1-202ENST00000376709 CABLES1Q8TDN4 633 aa25.12■■□□□ 1.61
VSX1-202ENST00000376709 RBM25P49756 843 aaKnown RBP25.12■■□□□ 1.61
VSX1-202ENST00000376709 C1orf141Q5JVX7 400 aa25.12■■□□□ 1.61
VSX1-202ENST00000376709 ERBB3P21860 1342 aa25.11■■□□□ 1.61
VSX1-202ENST00000376709 C16orf71Q8IYS4 520 aaPredicted RBP25.11■■□□□ 1.61
VSX1-202ENST00000376709 ZNF335Q9H4Z2 1342 aaPredicted RBP25.11■■□□□ 1.61
VSX1-202ENST00000376709 KDM3BQ7LBC6 1761 aa25.11■■□□□ 1.61
VSX1-202ENST00000376709 GNAI3P08754 354 aa25.11■■□□□ 1.61
VSX1-202ENST00000376709 GSPT1P15170 499 aaKnown RBP25.11■■□□□ 1.61
VSX1-202ENST00000376709 MPRIPQ6WCQ1 1025 aa25.11■■□□□ 1.61
VSX1-202ENST00000376709 CDC45O75419 566 aa25.1■■□□□ 1.61
VSX1-202ENST00000376709 EIF4A1P60842 406 aaKnown RBP25.1■■□□□ 1.61
VSX1-202ENST00000376709 TTC22Q5TAA0 569 aa25.1■■□□□ 1.61
VSX1-202ENST00000376709 BTBD11A6QL63 1104 aa25.09■■□□□ 1.61
VSX1-202ENST00000376709 SMARCA5O60264 1052 aaPredicted RBP25.09■■□□□ 1.61
VSX1-202ENST00000376709 EIF2S2P20042 333 aaKnown RBP25.09■■□□□ 1.61
VSX1-202ENST00000376709 BRINP3Q76B58 766 aa25.09■■□□□ 1.61
VSX1-202ENST00000376709 N4BP2Q86UW6 1770 aaPredicted RBP25.09■■□□□ 1.61
VSX1-202ENST00000376709 PXDNLA1KZ92 1463 aa25.08■■□□□ 1.61
VSX1-202ENST00000376709 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.61
VSX1-202ENST00000376709 FRAT2O75474 233 aaPredicted RBP25.07■■□□□ 1.6
VSX1-202ENST00000376709 HOXB7P09629 217 aa25.07■■□□□ 1.6
VSX1-202ENST00000376709 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
VSX1-202ENST00000376709 OTUD7AQ8TE49 926 aaPredicted RBP25.07■■□□□ 1.6
VSX1-202ENST00000376709 PHAXQ9H814 394 aaKnown RBP25.07■■□□□ 1.6
VSX1-202ENST00000376709 HSCBQ8IWL3 235 aa25.05■■□□□ 1.6
VSX1-202ENST00000376709 ANTXR1Q9H6X2 564 aa25.05■■□□□ 1.6
VSX1-202ENST00000376709 RNMTO43148 476 aaKnown RBP25.05■■□□□ 1.6
VSX1-202ENST00000376709 KCNQ3O43525 872 aa25.04■■□□□ 1.6
VSX1-202ENST00000376709 CHRNA2Q15822 529 aa25.04■■□□□ 1.6
VSX1-202ENST00000376709 SPRYD3Q8NCJ5 442 aa25.04■■□□□ 1.6
VSX1-202ENST00000376709 NLRP2Q9NX02 1062 aa25.04■■□□□ 1.6
VSX1-202ENST00000376709 COL18A1P39060 1754 aa25.04■■□□□ 1.6
VSX1-202ENST00000376709 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
VSX1-202ENST00000376709 CHPF2Q9P2E5 772 aa25.03■■□□□ 1.6
VSX1-202ENST00000376709 CRYBG1Q9Y4K1 1723 aa25.03■■□□□ 1.6
VSX1-202ENST00000376709 OVOS2A0A0G2JMS6 1433 aa25.02■■□□□ 1.6
VSX1-202ENST00000376709 EXOC6BQ9Y2D4 811 aa25.02■■□□□ 1.6
VSX1-202ENST00000376709 UBTFL1P0CB47 393 aaPredicted RBP25.01■■□□□ 1.59
VSX1-202ENST00000376709 LRRFIP2Q9Y608 721 aaKnown RBP25.01■■□□□ 1.59
VSX1-202ENST00000376709 USP44Q9H0E7 712 aa25.01■■□□□ 1.59
VSX1-202ENST00000376709 SLAIN2Q9P270 581 aa25■■□□□ 1.59
VSX1-202ENST00000376709 PNMA6EA0A0J9YXQ4 647 aa25■■□□□ 1.59
VSX1-202ENST00000376709 CSB-PGBD3P0DP91 1061 aa25■■□□□ 1.59
VSX1-202ENST00000376709 ATP8B2P98198 1209 aa25■■□□□ 1.59
VSX1-202ENST00000376709 RAPGEF4Q8WZA2 1011 aa24.99■■□□□ 1.59
VSX1-202ENST00000376709 SRCIN1Q9C0H9 1055 aa24.99■■□□□ 1.59
VSX1-202ENST00000376709 SDSP20132 328 aa24.98■■□□□ 1.59
VSX1-202ENST00000376709 CASC1Q6TDU7 716 aa24.98■■□□□ 1.59
VSX1-202ENST00000376709 SNX21Q969T3 373 aa24.97■■□□□ 1.59
VSX1-202ENST00000376709 LRRCC1Q9C099 1032 aa24.97■■□□□ 1.59
VSX1-202ENST00000376709 KIF2CQ99661 725 aa24.96■■□□□ 1.59
VSX1-202ENST00000376709 MEGF6O75095 1541 aa24.96■■□□□ 1.59
VSX1-202ENST00000376709 CPDO75976 1380 aa24.96■■□□□ 1.59
VSX1-202ENST00000376709 PI4KAP2A4QPH2 592 aa24.95■■□□□ 1.59
VSX1-202ENST00000376709 PI4KAP1Q8N8J0 262 aa24.95■■□□□ 1.59
VSX1-202ENST00000376709 DBF4Q9UBU7 674 aaPredicted RBP24.95■■□□□ 1.59
VSX1-202ENST00000376709 ABCC6O95255 1503 aa24.95■■□□□ 1.58
VSX1-202ENST00000376709 ANXA1P04083 346 aa24.95■■□□□ 1.58
VSX1-202ENST00000376709 TATP17735 454 aaPredicted RBP24.95■■□□□ 1.58
VSX1-202ENST00000376709 PDE1AP54750 535 aa24.95■■□□□ 1.58
VSX1-202ENST00000376709 DNAAF4Q8WXU2 420 aa24.95■■□□□ 1.58
VSX1-202ENST00000376709 GSE1Q14687 1217 aa24.94■■□□□ 1.58
VSX1-202ENST00000376709 OSBPL3Q9H4L5 887 aa24.94■■□□□ 1.58
VSX1-202ENST00000376709 SIPA1L3O60292 1781 aaPredicted RBP24.94■■□□□ 1.58
VSX1-202ENST00000376709 IBTKQ9P2D0 1353 aaPredicted RBP24.93■■□□□ 1.58
VSX1-202ENST00000376709 SOS2Q07890 1332 aaPredicted RBP24.93■■□□□ 1.58
VSX1-202ENST00000376709 GIGYF1O75420 1035 aaPredicted RBP24.93■■□□□ 1.58
VSX1-202ENST00000376709 ADAMTS7Q9UKP4 1686 aa24.92■■□□□ 1.58
VSX1-202ENST00000376709 BEND3Q5T5X7 828 aa24.91■■□□□ 1.58
VSX1-202ENST00000376709 CHMP5Q9NZZ3 219 aa24.91■■□□□ 1.58
VSX1-202ENST00000376709 HSP90AB1P08238 724 aaKnown RBP24.91■■□□□ 1.58
VSX1-202ENST00000376709 SPG7Q9UQ90 795 aa24.9■■□□□ 1.58
VSX1-202ENST00000376709 MX1P20591 662 aa24.9■■□□□ 1.58
VSX1-202ENST00000376709 ADCY9O60503 1353 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms