RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TFIP11Q9UBB9 837 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
TNFRSF1B-201ENST00000376259 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 AACSQ86V21 672 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 EYA1Q99502 592 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CCDC39Q9UFE4 941 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ABCC4O15439 1325 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CHD1O14646 1710 aa17.3■□□□□ 0.36
TNFRSF1B-201ENST00000376259 H3BQV1 296 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1B-201ENST00000376259 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CKAP2LQ8IYA6 745 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 GPT2Q8TD30 523 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 POGZQ7Z3K3 1410 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 WDR33Q9C0J8 1336 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
TNFRSF1B-201ENST00000376259 CHL1O00533 1208 aa17.27■□□□□ 0.36
TNFRSF1B-201ENST00000376259 MAP3K4Q9Y6R4 1608 aa17.27■□□□□ 0.36
TNFRSF1B-201ENST00000376259 PLXNC1O60486 1568 aa17.27■□□□□ 0.36
TNFRSF1B-201ENST00000376259 RUFY2Q8WXA3 655 aa17.27■□□□□ 0.35
TNFRSF1B-201ENST00000376259 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 TPM2P07951 284 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CHPF2Q9P2E5 772 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 PTPRCP08575 1304 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 NPHP1O15259 732 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CHMLP26374 656 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 MCM2P49736 904 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
TNFRSF1B-201ENST00000376259 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 MYOM2P54296 1465 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-201ENST00000376259 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 RTL1A6NKG5 1358 aa17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
TNFRSF1B-201ENST00000376259 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 TRIM5Q9C035 493 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 NDUFB9Q9Y6M9 179 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ADCY5O95622 1261 aa17.23■□□□□ 0.35
TNFRSF1B-201ENST00000376259 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 GJB2P29033 226 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 AK2P54819 239 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
TNFRSF1B-201ENST00000376259 KCNQ3O43525 872 aa17.21■□□□□ 0.35
TNFRSF1B-201ENST00000376259 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
TNFRSF1B-201ENST00000376259 METP08581 1390 aa17.21■□□□□ 0.35
TNFRSF1B-201ENST00000376259 STX6O43752 255 aa17.21■□□□□ 0.35
TNFRSF1B-201ENST00000376259 GUCY1B3Q02153 619 aa17.21■□□□□ 0.35
TNFRSF1B-201ENST00000376259 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 KIF1BO60333 1816 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 NLRP1Q9C000 1473 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 BECN2A8MW95 431 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
TNFRSF1B-201ENST00000376259 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
TNFRSF1B-201ENST00000376259 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-201ENST00000376259 LIMCH1Q9UPQ0 1083 aa17.19■□□□□ 0.34
TNFRSF1B-201ENST00000376259 MAP3K2Q9Y2U5 619 aa17.19■□□□□ 0.34
TNFRSF1B-201ENST00000376259 TET3O43151 1660 aa17.18■□□□□ 0.34
TNFRSF1B-201ENST00000376259 GOLGA6L19H0YKK7 550 aa17.18■□□□□ 0.34
TNFRSF1B-201ENST00000376259 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
TNFRSF1B-201ENST00000376259 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
TNFRSF1B-201ENST00000376259 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-201ENST00000376259 TULP4Q9NRJ4 1543 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 GOLGA6L6A8MZA4 724 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms