RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 NGEFQ8N5V2 710 aa23.2■■□□□ 1.3
C6orf48-204ENST00000375639 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
C6orf48-204ENST00000375639 BAG6P46379 1132 aa23.19■■□□□ 1.3
C6orf48-204ENST00000375639 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
C6orf48-204ENST00000375639 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
C6orf48-204ENST00000375639 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
C6orf48-204ENST00000375639 PIGBQ92521 554 aa23.19■■□□□ 1.3
C6orf48-204ENST00000375639 ITGB4P16144 1822 aa23.18■■□□□ 1.3
C6orf48-204ENST00000375639 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
C6orf48-204ENST00000375639 NHSQ6T4R5 1651 aa23.18■■□□□ 1.3
C6orf48-204ENST00000375639 TAF7Q15545 349 aaPredicted RBP23.16■■□□□ 1.3
C6orf48-204ENST00000375639 MRC1P22897 1456 aa23.16■■□□□ 1.3
C6orf48-204ENST00000375639 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
C6orf48-204ENST00000375639 BTBD11A6QL63 1104 aa23.14■■□□□ 1.29
C6orf48-204ENST00000375639 APBA3O96018 575 aa23.14■■□□□ 1.29
C6orf48-204ENST00000375639 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
C6orf48-204ENST00000375639 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
C6orf48-204ENST00000375639 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
C6orf48-204ENST00000375639 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
C6orf48-204ENST00000375639 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
C6orf48-204ENST00000375639 BTAF1O14981 1849 aa23.12■■□□□ 1.29
C6orf48-204ENST00000375639 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
C6orf48-204ENST00000375639 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
C6orf48-204ENST00000375639 R3HDM1Q15032 1099 aaKnown RBP23.1■■□□□ 1.29
C6orf48-204ENST00000375639 SMARCC1Q92922 1105 aaPredicted RBP23.1■■□□□ 1.29
C6orf48-204ENST00000375639 YY1P25490 414 aa23.09■■□□□ 1.29
C6orf48-204ENST00000375639 EN1Q05925 392 aaPredicted RBP23.09■■□□□ 1.29
C6orf48-204ENST00000375639 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
C6orf48-204ENST00000375639 TSPYL4Q9UJ04 414 aa23.09■■□□□ 1.29
C6orf48-204ENST00000375639 GNAI1P63096 354 aa23.08■■□□□ 1.29
C6orf48-204ENST00000375639 CFAP44Q96MT7 982 aa23.08■■□□□ 1.29
C6orf48-204ENST00000375639 YTHDC1Q96MU7 727 aaKnown RBP23.08■■□□□ 1.29
C6orf48-204ENST00000375639 TNS1Q9HBL0 1735 aaKnown RBP23.08■■□□□ 1.28
C6orf48-204ENST00000375639 ZNF521Q96K83 1311 aa23.08■■□□□ 1.28
C6orf48-204ENST00000375639 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
C6orf48-204ENST00000375639 KCNQ3O43525 872 aa23.07■■□□□ 1.28
C6orf48-204ENST00000375639 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
C6orf48-204ENST00000375639 IFT57Q9NWB7 429 aa23.07■■□□□ 1.28
C6orf48-204ENST00000375639 IL16Q14005 1332 aa23.07■■□□□ 1.28
C6orf48-204ENST00000375639 CHL1O00533 1208 aa23.06■■□□□ 1.28
C6orf48-204ENST00000375639 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
C6orf48-204ENST00000375639 RBM42Q9BTD8 480 aaKnown RBP23.06■■□□□ 1.28
C6orf48-204ENST00000375639 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
C6orf48-204ENST00000375639 PLSCR1O15162 318 aa23.05■■□□□ 1.28
C6orf48-204ENST00000375639 ZNF853P0CG23 659 aa23.05■■□□□ 1.28
C6orf48-204ENST00000375639 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
C6orf48-204ENST00000375639 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
C6orf48-204ENST00000375639 PAPPAQ13219 1627 aa23.02■■□□□ 1.28
C6orf48-204ENST00000375639 ZNF496Q96IT1 587 aaPredicted RBP23.02■■□□□ 1.28
C6orf48-204ENST00000375639 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
C6orf48-204ENST00000375639 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
C6orf48-204ENST00000375639 ZBED9Q6R2W3 1325 aa23.02■■□□□ 1.28
C6orf48-204ENST00000375639 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
C6orf48-204ENST00000375639 SIK1P57059 783 aa23.01■■□□□ 1.27
C6orf48-204ENST00000375639 TXNRD1Q16881 649 aa23.01■■□□□ 1.27
C6orf48-204ENST00000375639 TSR2Q969E8 191 aaKnown RBP23.01■■□□□ 1.27
C6orf48-204ENST00000375639 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
C6orf48-204ENST00000375639 EIF4A1P60842 406 aaKnown RBP23■■□□□ 1.27
C6orf48-204ENST00000375639 EZH2Q15910 746 aaKnown RBP23■■□□□ 1.27
C6orf48-204ENST00000375639 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
C6orf48-204ENST00000375639 CAMKK2Q96RR4 588 aa23■■□□□ 1.27
C6orf48-204ENST00000375639 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
C6orf48-204ENST00000375639 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
C6orf48-204ENST00000375639 ATP6V1AP38606 617 aa22.99■■□□□ 1.27
C6orf48-204ENST00000375639 KCNQ4P56696 695 aa22.99■■□□□ 1.27
C6orf48-204ENST00000375639 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
C6orf48-204ENST00000375639 E9PSI1 815 aa22.98■■□□□ 1.27
C6orf48-204ENST00000375639 PROM2Q8N271 834 aa22.98■■□□□ 1.27
C6orf48-204ENST00000375639 SLC4A9Q96Q91 983 aa22.98■■□□□ 1.27
C6orf48-204ENST00000375639 HEG1Q9ULI3 1381 aa22.98■■□□□ 1.27
C6orf48-204ENST00000375639 LY75O60449 1722 aa22.97■■□□□ 1.27
C6orf48-204ENST00000375639 SLFN5Q08AF3 891 aa22.97■■□□□ 1.27
C6orf48-204ENST00000375639 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
C6orf48-204ENST00000375639 UBR2Q8IWV8 1755 aa22.96■■□□□ 1.27
C6orf48-204ENST00000375639 SLC27A3Q5K4L6 730 aa22.96■■□□□ 1.27
C6orf48-204ENST00000375639 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
C6orf48-204ENST00000375639 ITPK1Q13572 414 aa22.95■■□□□ 1.26
C6orf48-204ENST00000375639 KRT24Q2M2I5 525 aa22.95■■□□□ 1.26
C6orf48-204ENST00000375639 DNAJC10Q8IXB1 793 aa22.95■■□□□ 1.26
C6orf48-204ENST00000375639 VSIG10Q8N0Z9 540 aa22.95■■□□□ 1.26
C6orf48-204ENST00000375639 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
C6orf48-204ENST00000375639 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
C6orf48-204ENST00000375639 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
C6orf48-204ENST00000375639 GIGYF1O75420 1035 aaPredicted RBP22.93■■□□□ 1.26
C6orf48-204ENST00000375639 PRAMEF22A3QJZ6 481 aa22.92■■□□□ 1.26
C6orf48-204ENST00000375639 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
C6orf48-204ENST00000375639 EXOSC9Q06265 439 aaKnown RBP22.92■■□□□ 1.26
C6orf48-204ENST00000375639 C8orf58Q8NAV2 365 aa22.92■■□□□ 1.26
C6orf48-204ENST00000375639 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
C6orf48-204ENST00000375639 DUSP27Q5VZP5 1158 aa22.91■■□□□ 1.26
C6orf48-204ENST00000375639 TRMT2AQ8IZ69 625 aaKnown RBP22.9■■□□□ 1.26
C6orf48-204ENST00000375639 LINC00116Q8NCU8 138 aa22.9■■□□□ 1.26
C6orf48-204ENST00000375639 USP16Q9Y5T5 823 aa22.9■■□□□ 1.26
C6orf48-204ENST00000375639 STARD3NLO95772 234 aa22.89■■□□□ 1.25
C6orf48-204ENST00000375639 HMGB2P26583 209 aaKnown RBP22.89■■□□□ 1.25
C6orf48-204ENST00000375639 TSPYL6Q8N831 410 aa22.89■■□□□ 1.25
C6orf48-204ENST00000375639 ZNF831Q5JPB2 1677 aa22.88■■□□□ 1.25
C6orf48-204ENST00000375639 EIF2S2P20042 333 aaKnown RBP22.88■■□□□ 1.25
C6orf48-204ENST00000375639 TJP1Q07157 1748 aa22.88■■□□□ 1.25
C6orf48-204ENST00000375639 CYP19A1P11511 503 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms