RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 UBR3Q6ZT12 1888 aa14.67□□□□□ -0.06
CSGALNACT2-201ENST00000374466 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
CSGALNACT2-201ENST00000374466 PXDNLA1KZ92 1463 aa14.67□□□□□ -0.06
CSGALNACT2-201ENST00000374466 RNF123Q5XPI4 1314 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 CCDC125Q86Z20 511 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 APAF1O14727 1248 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 GNAI1P63096 354 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 PPM1GO15355 546 aaPredicted RBP14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 HMOX1P09601 288 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 C4BP0C0L5 1744 aa14.66□□□□□ -0.06
CSGALNACT2-201ENST00000374466 ZNF530Q6P9A1 599 aaPredicted RBP14.65□□□□□ -0.06
CSGALNACT2-201ENST00000374466 RIPK4P57078 832 aa14.65□□□□□ -0.06
CSGALNACT2-201ENST00000374466 POTEAQ6S8J7 498 aa14.65□□□□□ -0.06
CSGALNACT2-201ENST00000374466 LAMB2P55268 1798 aa14.65□□□□□ -0.06
CSGALNACT2-201ENST00000374466 CASZ1Q86V15 1759 aa14.65□□□□□ -0.06
CSGALNACT2-201ENST00000374466 C1orf141Q5JVX7 400 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 FAM196AQ6ZSG2 479 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 SEPT12Q8IYM1 358 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 C4AP0C0L4 1744 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 NRXN2Q9P2S2 1712 aa14.64□□□□□ -0.07
CSGALNACT2-201ENST00000374466 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
CSGALNACT2-201ENST00000374466 USHBP1Q8N6Y0 703 aa14.63□□□□□ -0.07
CSGALNACT2-201ENST00000374466 PLSCR1O15162 318 aa14.62□□□□□ -0.07
CSGALNACT2-201ENST00000374466 SOX12O15370 315 aa14.62□□□□□ -0.07
CSGALNACT2-201ENST00000374466 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
CSGALNACT2-201ENST00000374466 MYH16Q9H6N6 1097 aa14.62□□□□□ -0.07
CSGALNACT2-201ENST00000374466 SMARCC1Q92922 1105 aaPredicted RBP14.61□□□□□ -0.07
CSGALNACT2-201ENST00000374466 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
CSGALNACT2-201ENST00000374466 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
CSGALNACT2-201ENST00000374466 KRT27Q7Z3Y8 459 aa14.6□□□□□ -0.07
CSGALNACT2-201ENST00000374466 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
CSGALNACT2-201ENST00000374466 FAM98CQ17RN3 349 aaKnown RBP14.58□□□□□ -0.07
CSGALNACT2-201ENST00000374466 EIF4A1P60842 406 aaKnown RBP14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 FAM9BQ8IZU0 186 aa14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 FANCIQ9NVI1 1328 aa14.58□□□□□ -0.08
CSGALNACT2-201ENST00000374466 CNTNAP4Q9C0A0 1308 aa14.57□□□□□ -0.08
CSGALNACT2-201ENST00000374466 SLC27A3Q5K4L6 730 aa14.57□□□□□ -0.08
CSGALNACT2-201ENST00000374466 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
CSGALNACT2-201ENST00000374466 LGR6Q9HBX8 967 aa14.56□□□□□ -0.08
CSGALNACT2-201ENST00000374466 ATP10DQ9P241 1426 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 KIF13BQ9NQT8 1826 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 RIC1Q4ADV7 1423 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 ATG3Q9NT62 314 aa14.55□□□□□ -0.08
CSGALNACT2-201ENST00000374466 COL15A1P39059 1388 aa14.54□□□□□ -0.08
CSGALNACT2-201ENST00000374466 PIGBQ92521 554 aa14.54□□□□□ -0.08
CSGALNACT2-201ENST00000374466 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
CSGALNACT2-201ENST00000374466 MYH14Q7Z406 1995 aaKnown RBP14.53□□□□□ -0.08
CSGALNACT2-201ENST00000374466 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
CSGALNACT2-201ENST00000374466 GIGYF1O75420 1035 aaPredicted RBP14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 CABP4P57796 275 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 PALLDQ8WX93 1383 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 VAMP4O75379 141 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 FMNL2Q96PY5 1086 aa14.51□□□□□ -0.09
CSGALNACT2-201ENST00000374466 MCM10Q7L590 875 aa14.5□□□□□ -0.09
CSGALNACT2-201ENST00000374466 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
CSGALNACT2-201ENST00000374466 MPRIPQ6WCQ1 1025 aa14.5□□□□□ -0.09
CSGALNACT2-201ENST00000374466 HNRNPUQ00839 825 aaKnown RBP eCLIP14.49□□□□□ -0.09
CSGALNACT2-201ENST00000374466 TEFQ10587 303 aa14.49□□□□□ -0.09
CSGALNACT2-201ENST00000374466 NUP98P52948 1817 aa14.49□□□□□ -0.09
CSGALNACT2-201ENST00000374466 DLEC1Q9Y238 1755 aa14.49□□□□□ -0.09
CSGALNACT2-201ENST00000374466 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
CSGALNACT2-201ENST00000374466 PTPRCP08575 1304 aa14.47□□□□□ -0.09
CSGALNACT2-201ENST00000374466 ADRA2BP18089 450 aa14.47□□□□□ -0.09
CSGALNACT2-201ENST00000374466 NFATC2IPQ8NCF5 419 aa14.47□□□□□ -0.09
CSGALNACT2-201ENST00000374466 CAMKK2Q96RR4 588 aa14.47□□□□□ -0.09
CSGALNACT2-201ENST00000374466 AAMPQ13685 434 aa14.46□□□□□ -0.09
CSGALNACT2-201ENST00000374466 PDIA6Q15084 440 aa14.46□□□□□ -0.09
CSGALNACT2-201ENST00000374466 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 TSPYL4Q9UJ04 414 aa14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 LRP5O75197 1615 aa14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 DDX60Q8IY21 1712 aaKnown RBP14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 KIAA1551Q9HCM1 1747 aa14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
CSGALNACT2-201ENST00000374466 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
CSGALNACT2-201ENST00000374466 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
CSGALNACT2-201ENST00000374466 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
CSGALNACT2-201ENST00000374466 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
CSGALNACT2-201ENST00000374466 RARSP54136 660 aaKnown RBP14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 MRPL50Q8N5N7 158 aaKnown RBP14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 DDX21Q9NR30 783 aaKnown RBP eCLIP14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 IL6STP40189 918 aaPredicted RBP14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 DCTN1Q14203 1278 aa14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
CSGALNACT2-201ENST00000374466 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
CSGALNACT2-201ENST00000374466 CCDC30Q5VVM6 783 aa14.42□□□□□ -0.1
CSGALNACT2-201ENST00000374466 LOC102724428A0A0B4J2F2 783 aa14.42□□□□□ -0.1
CSGALNACT2-201ENST00000374466 ERVV-1B6SEH8 477 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms