RNA–Protein interactions for RNA: ENST00000373991.3

SCAND1-202, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-202ENST00000373991 CFAP44Q96MT7 982 aa28.86■■■□□ 2.21
SCAND1-202ENST00000373991 TOGARAM1Q9Y4F4 1720 aa28.86■■■□□ 2.21
SCAND1-202ENST00000373991 GNAI1P63096 354 aa28.85■■■□□ 2.21
SCAND1-202ENST00000373991 PIGBQ92521 554 aa28.85■■■□□ 2.21
SCAND1-202ENST00000373991 IFT57Q9NWB7 429 aa28.85■■■□□ 2.21
SCAND1-202ENST00000373991 VIRMAQ69YN4 1812 aaKnown RBP28.84■■■□□ 2.21
SCAND1-202ENST00000373991 BTBD11A6QL63 1104 aa28.84■■■□□ 2.21
SCAND1-202ENST00000373991 MRC1P22897 1456 aa28.83■■■□□ 2.21
SCAND1-202ENST00000373991 ZNF853P0CG23 659 aa28.83■■■□□ 2.21
SCAND1-202ENST00000373991 DOT1LQ8TEK3 1739 aa28.83■■■□□ 2.21
SCAND1-202ENST00000373991 EP400Q96L91 3159 aa28.83■■■□□ 2.21
SCAND1-202ENST00000373991 CHL1O00533 1208 aa28.83■■■□□ 2.21
SCAND1-202ENST00000373991 KAT6BQ8WYB5 2073 aa28.82■■■□□ 2.2
SCAND1-202ENST00000373991 TSPYL4Q9UJ04 414 aa28.82■■■□□ 2.2
SCAND1-202ENST00000373991 E9PSI1 815 aa28.81■■■□□ 2.2
SCAND1-202ENST00000373991 SLFN5Q08AF3 891 aa28.81■■■□□ 2.2
SCAND1-202ENST00000373991 PTF1AQ7RTS3 328 aa28.81■■■□□ 2.2
SCAND1-202ENST00000373991 MBIPQ9NS73 344 aa28.8■■■□□ 2.2
SCAND1-202ENST00000373991 SLC39A6Q13433 755 aa28.8■■■□□ 2.2
SCAND1-202ENST00000373991 TSR2Q969E8 191 aaKnown RBP28.8■■■□□ 2.2
SCAND1-202ENST00000373991 MYH16Q9H6N6 1097 aa28.8■■■□□ 2.2
SCAND1-202ENST00000373991 BABAM1Q9NWV8 329 aa28.8■■■□□ 2.2
SCAND1-202ENST00000373991 TRIM37O94972 964 aa28.78■■■□□ 2.2
SCAND1-202ENST00000373991 BCL11BQ9C0K0 894 aaPredicted RBP28.77■■■□□ 2.2
SCAND1-202ENST00000373991 ITGB4P16144 1822 aa28.77■■■□□ 2.2
SCAND1-202ENST00000373991 KCNQ3O43525 872 aa28.77■■■□□ 2.2
SCAND1-202ENST00000373991 ZNF790Q6PG37 636 aa28.77■■■□□ 2.2
SCAND1-202ENST00000373991 ASAP1Q9ULH1 1129 aa28.77■■■□□ 2.2
SCAND1-202ENST00000373991 SIPA1L3O60292 1781 aaPredicted RBP28.77■■■□□ 2.2
SCAND1-202ENST00000373991 FANCIQ9NVI1 1328 aa28.76■■■□□ 2.19
SCAND1-202ENST00000373991 TTC5Q8N0Z6 440 aa28.75■■■□□ 2.19
SCAND1-202ENST00000373991 ATG3Q9NT62 314 aa28.75■■■□□ 2.19
SCAND1-202ENST00000373991 TRMT2AQ8IZ69 625 aaKnown RBP28.74■■■□□ 2.19
SCAND1-202ENST00000373991 NHSQ6T4R5 1651 aa28.73■■■□□ 2.19
SCAND1-202ENST00000373991 SBF2Q86WG5 1849 aa28.73■■■□□ 2.19
SCAND1-202ENST00000373991 DUSP27Q5VZP5 1158 aa28.72■■■□□ 2.19
SCAND1-202ENST00000373991 PTCD1O75127 700 aaKnown RBP28.69■■■□□ 2.18
SCAND1-202ENST00000373991 EIF4A1P60842 406 aaKnown RBP28.69■■■□□ 2.18
SCAND1-202ENST00000373991 ZNF496Q96IT1 587 aaPredicted RBP28.69■■■□□ 2.18
SCAND1-202ENST00000373991 EXOSC9Q06265 439 aaKnown RBP28.68■■■□□ 2.18
SCAND1-202ENST00000373991 SMARCC1Q92922 1105 aaPredicted RBP28.68■■■□□ 2.18
SCAND1-202ENST00000373991 KRT24Q2M2I5 525 aa28.67■■■□□ 2.18
SCAND1-202ENST00000373991 KDM3BQ7LBC6 1761 aa28.66■■■□□ 2.18
SCAND1-202ENST00000373991 FMNL2Q96PY5 1086 aa28.66■■■□□ 2.18
SCAND1-202ENST00000373991 RBM42Q9BTD8 480 aaKnown RBP28.66■■■□□ 2.18
SCAND1-202ENST00000373991 ELL2O00472 640 aaPredicted RBP28.66■■■□□ 2.18
SCAND1-202ENST00000373991 C8orf58Q8NAV2 365 aa28.66■■■□□ 2.18
SCAND1-202ENST00000373991 BTAF1O14981 1849 aa28.65■■■□□ 2.18
SCAND1-202ENST00000373991 PALLDQ8WX93 1383 aa28.65■■■□□ 2.18
SCAND1-202ENST00000373991 APBA3O96018 575 aa28.64■■■□□ 2.18
SCAND1-202ENST00000373991 PAPPAQ13219 1627 aa28.64■■■□□ 2.17
SCAND1-202ENST00000373991 TSPYL6Q8N831 410 aa28.63■■■□□ 2.17
SCAND1-202ENST00000373991 KCPQ6ZWJ8 1503 aa28.62■■■□□ 2.17
SCAND1-202ENST00000373991 GIGYF1O75420 1035 aaPredicted RBP28.6■■■□□ 2.17
SCAND1-202ENST00000373991 HEG1Q9ULI3 1381 aa28.6■■■□□ 2.17
SCAND1-202ENST00000373991 LOC102724428A0A0B4J2F2 783 aa28.6■■■□□ 2.17
SCAND1-202ENST00000373991 SNRPA1P09661 255 aaKnown RBP28.6■■■□□ 2.17
SCAND1-202ENST00000373991 SIK1P57059 783 aa28.6■■■□□ 2.17
SCAND1-202ENST00000373991 TWISTNBQ3B726 338 aaPredicted RBP28.6■■■□□ 2.17
SCAND1-202ENST00000373991 PRAMEF22A3QJZ6 481 aa28.59■■■□□ 2.17
SCAND1-202ENST00000373991 ILDR2Q71H61 639 aa28.59■■■□□ 2.17
SCAND1-202ENST00000373991 SLC4A9Q96Q91 983 aa28.59■■■□□ 2.17
SCAND1-202ENST00000373991 UBR2Q8IWV8 1755 aa28.58■■■□□ 2.17
SCAND1-202ENST00000373991 SF3B2Q13435 895 aaKnown RBP28.57■■■□□ 2.16
SCAND1-202ENST00000373991 VSIG10Q8N0Z9 540 aa28.57■■■□□ 2.16
SCAND1-202ENST00000373991 ATP6V1AP38606 617 aa28.57■■■□□ 2.16
SCAND1-202ENST00000373991 PLSCR1O15162 318 aa28.56■■■□□ 2.16
SCAND1-202ENST00000373991 VAMP4O75379 141 aa28.56■■■□□ 2.16
SCAND1-202ENST00000373991 KCNQ4P56696 695 aa28.55■■■□□ 2.16
SCAND1-202ENST00000373991 USP16Q9Y5T5 823 aa28.55■■■□□ 2.16
SCAND1-202ENST00000373991 HOXB7P09629 217 aa28.54■■■□□ 2.16
SCAND1-202ENST00000373991 DNAJC10Q8IXB1 793 aa28.54■■■□□ 2.16
SCAND1-202ENST00000373991 CCNL1Q9UK58 526 aaPredicted RBP28.54■■■□□ 2.16
SCAND1-202ENST00000373991 EIF2S2P20042 333 aaKnown RBP28.53■■■□□ 2.16
SCAND1-202ENST00000373991 CCDC125Q86Z20 511 aa28.53■■■□□ 2.16
SCAND1-202ENST00000373991 TEX13AQ9BXU3 409 aaPredicted RBP28.53■■■□□ 2.16
SCAND1-202ENST00000373991 TNS1Q9HBL0 1735 aaKnown RBP28.53■■■□□ 2.16
SCAND1-202ENST00000373991 NECTIN2Q92692 538 aa28.52■■■□□ 2.16
SCAND1-202ENST00000373991 SOS1Q07889 1333 aaPredicted RBP28.52■■■□□ 2.16
SCAND1-202ENST00000373991 CT47B1P0C2W7 299 aaPredicted RBP28.52■■■□□ 2.16
SCAND1-202ENST00000373991 ITPK1Q13572 414 aa28.52■■■□□ 2.16
SCAND1-202ENST00000373991 HDGFL1Q5TGJ6 251 aa28.51■■■□□ 2.15
SCAND1-202ENST00000373991 TXNRD1Q16881 649 aa28.5■■■□□ 2.15
SCAND1-202ENST00000373991 PROM2Q8N271 834 aa28.5■■■□□ 2.15
SCAND1-202ENST00000373991 EN1Q05925 392 aaPredicted RBP28.49■■■□□ 2.15
SCAND1-202ENST00000373991 STARD3NLO95772 234 aa28.49■■■□□ 2.15
SCAND1-202ENST00000373991 BAG6P46379 1132 aa28.49■■■□□ 2.15
SCAND1-202ENST00000373991 SLC27A3Q5K4L6 730 aa28.49■■■□□ 2.15
SCAND1-202ENST00000373991 LRRC4BQ9NT99 713 aa28.49■■■□□ 2.15
SCAND1-202ENST00000373991 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
SCAND1-202ENST00000373991 LY75O60449 1722 aa28.47■■■□□ 2.15
SCAND1-202ENST00000373991 CYP19A1P11511 503 aaPredicted RBP28.47■■■□□ 2.15
SCAND1-202ENST00000373991 DEFB132Q7Z7B7 95 aa28.47■■■□□ 2.15
SCAND1-202ENST00000373991 UPF1Q92900 1129 aaKnown RBP eCLIP28.47■■■□□ 2.15
SCAND1-202ENST00000373991 CCDC30Q5VVM6 783 aa28.46■■■□□ 2.15
SCAND1-202ENST00000373991 CAMKK2Q96RR4 588 aa28.46■■■□□ 2.15
SCAND1-202ENST00000373991 CHMP4AQ9BY43 222 aa28.46■■■□□ 2.15
SCAND1-202ENST00000373991 C5P01031 1676 aa28.46■■■□□ 2.15
SCAND1-202ENST00000373991 ZNF428Q96B54 188 aa28.46■■■□□ 2.15
SCAND1-202ENST00000373991 EZH2Q15910 746 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms