RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 FAM193AP78312 1265 aa21.08■□□□□ 0.97
COL16A1-203ENST00000373672 SH2B1Q9NRF2 756 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-203ENST00000373672 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
COL16A1-203ENST00000373672 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
COL16A1-203ENST00000373672 CAMK4Q16566 473 aa21.08■□□□□ 0.97
COL16A1-203ENST00000373672 NUTM2BA6NNL0 878 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-203ENST00000373672 NUTM2EB1AL46 878 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-203ENST00000373672 LARP1Q6PKG0 1096 aaKnown RBP21.08■□□□□ 0.97
COL16A1-203ENST00000373672 NUTM2AQ8IVF1 878 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-203ENST00000373672 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.96
COL16A1-203ENST00000373672 POGZQ7Z3K3 1410 aa21.08■□□□□ 0.96
COL16A1-203ENST00000373672 MCM10Q7L590 875 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 ZNF287Q9HBT7 754 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 CCDC183Q5T5S1 534 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 ZSCAN30Q86W11 494 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 DESP17661 470 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 RARSP54136 660 aaKnown RBP21.07■□□□□ 0.96
COL16A1-203ENST00000373672 TAX1BP1Q86VP1 789 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 SCAND2PQ9GZW5 306 aaPredicted RBP21.07■□□□□ 0.96
COL16A1-203ENST00000373672 MIS18AQ9NYP9 233 aa21.07■□□□□ 0.96
COL16A1-203ENST00000373672 SMARCA5O60264 1052 aaPredicted RBP21.06■□□□□ 0.96
COL16A1-203ENST00000373672 PIBF1Q8WXW3 757 aa21.06■□□□□ 0.96
COL16A1-203ENST00000373672 ANO10Q9NW15 660 aa21.06■□□□□ 0.96
COL16A1-203ENST00000373672 CCDC85AQ96PX6 553 aaPredicted RBP21.06■□□□□ 0.96
COL16A1-203ENST00000373672 SNAPC4Q5SXM2 1469 aa21.06■□□□□ 0.96
COL16A1-203ENST00000373672 CCDC102AQ96A19 550 aa21.05■□□□□ 0.96
COL16A1-203ENST00000373672 USP5P45974 858 aa21.05■□□□□ 0.96
COL16A1-203ENST00000373672 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
COL16A1-203ENST00000373672 HMGB1P09429 215 aaKnown RBP21.05■□□□□ 0.96
COL16A1-203ENST00000373672 UBXN4Q92575 508 aa21.05■□□□□ 0.96
COL16A1-203ENST00000373672 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
COL16A1-203ENST00000373672 SF3B2Q13435 895 aaKnown RBP21.05■□□□□ 0.96
COL16A1-203ENST00000373672 FERMT3Q86UX7 667 aa21.05■□□□□ 0.96
COL16A1-203ENST00000373672 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
COL16A1-203ENST00000373672 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
COL16A1-203ENST00000373672 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 SFPQP23246 707 aaKnown RBP eCLIP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 THUMPD2Q9BTF0 503 aaKnown RBP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 ABCF2Q9UG63 623 aa21.04■□□□□ 0.96
COL16A1-203ENST00000373672 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 GBP2P32456 591 aaPredicted RBP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 PHAXQ9H814 394 aaKnown RBP21.04■□□□□ 0.96
COL16A1-203ENST00000373672 MATR3P43243 847 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL16A1-203ENST00000373672 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
COL16A1-203ENST00000373672 PPP1R1BQ9UD71 204 aaPredicted RBP21.03■□□□□ 0.96
COL16A1-203ENST00000373672 CCDC196A0A1B0GTZ2 297 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 PDCL2Q8N4E4 241 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 IFIT1P09914 478 aaKnown RBP21.03■□□□□ 0.96
COL16A1-203ENST00000373672 MYD88Q99836 296 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 PLCD4Q9BRC7 762 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 EZRP15311 586 aaKnown RBP21.03■□□□□ 0.96
COL16A1-203ENST00000373672 ZNF652Q9Y2D9 606 aa21.03■□□□□ 0.96
COL16A1-203ENST00000373672 NAIPQ13075 1403 aa21.02■□□□□ 0.96
COL16A1-203ENST00000373672 RAPGEF3O95398 923 aa21.02■□□□□ 0.96
COL16A1-203ENST00000373672 BOLA2Q9H3K6 86 aa21.02■□□□□ 0.96
COL16A1-203ENST00000373672 SPA17Q15506 151 aa21.02■□□□□ 0.96
COL16A1-203ENST00000373672 CAVIN4Q5BKX8 364 aa21.02■□□□□ 0.96
COL16A1-203ENST00000373672 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
COL16A1-203ENST00000373672 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
COL16A1-203ENST00000373672 AMOTQ4VCS5 1084 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 PTPN14Q15678 1187 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 POTEJP0CG39 1038 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 FKBP15Q5T1M5 1219 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 TSG101Q99816 390 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 HMGB2P26583 209 aaKnown RBP21.01■□□□□ 0.95
COL16A1-203ENST00000373672 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 TMOD2Q9NZR1 351 aa21.01■□□□□ 0.95
COL16A1-203ENST00000373672 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
COL16A1-203ENST00000373672 NAPBQ9H115 298 aa21■□□□□ 0.95
COL16A1-203ENST00000373672 TMCO3Q6UWJ1 677 aa21■□□□□ 0.95
COL16A1-203ENST00000373672 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
COL16A1-203ENST00000373672 CTAGE5O15320 804 aa20.99■□□□□ 0.95
COL16A1-203ENST00000373672 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
COL16A1-203ENST00000373672 TNIP1Q15025 636 aa20.99■□□□□ 0.95
COL16A1-203ENST00000373672 POLR3DP05423 398 aaPredicted RBP20.99■□□□□ 0.95
COL16A1-203ENST00000373672 USP8P40818 1118 aa20.99■□□□□ 0.95
COL16A1-203ENST00000373672 MINDY4BA8MYZ0 360 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 KIF5CO60282 957 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 RRP9O43818 475 aaKnown RBP20.98■□□□□ 0.95
COL16A1-203ENST00000373672 CASQ1P31415 396 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 LIMCH1Q9UPQ0 1083 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 MAP3K12Q12852 859 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 CRACR2AQ9BSW2 395 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 MKNK2Q9HBH9 465 aa20.98■□□□□ 0.95
COL16A1-203ENST00000373672 CETN2P41208 172 aa20.97■□□□□ 0.95
COL16A1-203ENST00000373672 CTCFLQ8NI51 663 aaPredicted RBP20.97■□□□□ 0.95
COL16A1-203ENST00000373672 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
COL16A1-203ENST00000373672 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
COL16A1-203ENST00000373672 PTPRCP08575 1304 aa20.97■□□□□ 0.95
COL16A1-203ENST00000373672 TOP1P11387 765 aaKnown RBP20.97■□□□□ 0.95
COL16A1-203ENST00000373672 SSR1P43307 286 aaKnown RBP20.97■□□□□ 0.95
COL16A1-203ENST00000373672 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
COL16A1-203ENST00000373672 SLC12A7Q9Y666 1083 aa20.96■□□□□ 0.95
COL16A1-203ENST00000373672 KIF18AQ8NI77 898 aa20.96■□□□□ 0.95
COL16A1-203ENST00000373672 CLIP2Q9UDT6 1046 aa20.96■□□□□ 0.95
COL16A1-203ENST00000373672 SLC5A1P13866 664 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms