RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ZNF827Q17R98 1081 aa24.29■■□□□ 1.48
PBX3-205ENST00000373492 ASAP1Q9ULH1 1129 aa24.29■■□□□ 1.48
PBX3-205ENST00000373492 LRP5O75197 1615 aa24.28■■□□□ 1.48
PBX3-205ENST00000373492 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
PBX3-205ENST00000373492 ATG3Q9NT62 314 aa24.28■■□□□ 1.48
PBX3-205ENST00000373492 ADAMTS8Q9UP79 889 aa24.28■■□□□ 1.48
PBX3-205ENST00000373492 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
PBX3-205ENST00000373492 SIPA1L3O60292 1781 aaPredicted RBP24.27■■□□□ 1.48
PBX3-205ENST00000373492 LOC102724428A0A0B4J2F2 783 aa24.26■■□□□ 1.47
PBX3-205ENST00000373492 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
PBX3-205ENST00000373492 SIK1P57059 783 aa24.26■■□□□ 1.47
PBX3-205ENST00000373492 RNMTO43148 476 aaKnown RBP24.25■■□□□ 1.47
PBX3-205ENST00000373492 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
PBX3-205ENST00000373492 LGR6Q9HBX8 967 aa24.24■■□□□ 1.47
PBX3-205ENST00000373492 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
PBX3-205ENST00000373492 TFCP2L1Q9NZI6 479 aa24.24■■□□□ 1.47
PBX3-205ENST00000373492 RUNDC1Q96C34 613 aa24.23■■□□□ 1.47
PBX3-205ENST00000373492 PDGFDQ9GZP0 370 aaPredicted RBP24.23■■□□□ 1.47
PBX3-205ENST00000373492 SLC52A2Q9HAB3 445 aa24.23■■□□□ 1.47
PBX3-205ENST00000373492 CASZ1Q86V15 1759 aa24.23■■□□□ 1.47
PBX3-205ENST00000373492 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
PBX3-205ENST00000373492 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
PBX3-205ENST00000373492 RTF1Q92541 710 aaKnown RBP24.22■■□□□ 1.47
PBX3-205ENST00000373492 NFE2L2Q16236 605 aa24.21■■□□□ 1.47
PBX3-205ENST00000373492 MRC1P22897 1456 aa24.2■■□□□ 1.47
PBX3-205ENST00000373492 TAF1LQ8IZX4 1826 aa24.2■■□□□ 1.46
PBX3-205ENST00000373492 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
PBX3-205ENST00000373492 ATP6V1AP38606 617 aa24.2■■□□□ 1.46
PBX3-205ENST00000373492 C5P01031 1676 aa24.2■■□□□ 1.46
PBX3-205ENST00000373492 PNPLA7Q6ZV29 1317 aa24.18■■□□□ 1.46
PBX3-205ENST00000373492 HTATSF1O43719 755 aaKnown RBP24.18■■□□□ 1.46
PBX3-205ENST00000373492 MTFR1LQ9H019 292 aa24.18■■□□□ 1.46
PBX3-205ENST00000373492 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
PBX3-205ENST00000373492 ZBTB7AO95365 584 aa24.17■■□□□ 1.46
PBX3-205ENST00000373492 SLC16A10Q8TF71 515 aa24.17■■□□□ 1.46
PBX3-205ENST00000373492 RBM42Q9BTD8 480 aaKnown RBP24.17■■□□□ 1.46
PBX3-205ENST00000373492 TEFQ10587 303 aa24.16■■□□□ 1.46
PBX3-205ENST00000373492 ITPK1Q13572 414 aa24.16■■□□□ 1.46
PBX3-205ENST00000373492 LINC00116Q8NCU8 138 aa24.16■■□□□ 1.46
PBX3-205ENST00000373492 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
PBX3-205ENST00000373492 AK7Q96M32 723 aa24.16■■□□□ 1.46
PBX3-205ENST00000373492 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
PBX3-205ENST00000373492 TMPOP42166 694 aaKnown RBP24.15■■□□□ 1.46
PBX3-205ENST00000373492 FAM9BQ8IZU0 186 aa24.15■■□□□ 1.46
PBX3-205ENST00000373492 FLAD1Q8NFF5 587 aa24.15■■□□□ 1.46
PBX3-205ENST00000373492 UBR2Q8IWV8 1755 aa24.15■■□□□ 1.46
PBX3-205ENST00000373492 C4BP0C0L5 1744 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 RIPK4P57078 832 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 LMOD3Q0VAK6 560 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 MIER1Q8N108 512 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 SLC4A9Q96Q91 983 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 CEMIPQ8WUJ3 1361 aa24.14■■□□□ 1.45
PBX3-205ENST00000373492 PTCD1O75127 700 aaKnown RBP24.13■■□□□ 1.45
PBX3-205ENST00000373492 ATF5Q9Y2D1 282 aaPredicted RBP24.13■■□□□ 1.45
PBX3-205ENST00000373492 NEUROD2Q15784 382 aa24.12■■□□□ 1.45
PBX3-205ENST00000373492 MCM10Q7L590 875 aa24.12■■□□□ 1.45
PBX3-205ENST00000373492 COL23A1Q86Y22 540 aaPredicted RBP24.12■■□□□ 1.45
PBX3-205ENST00000373492 PTGER2P43116 358 aa24.11■■□□□ 1.45
PBX3-205ENST00000373492 TUBGCP6Q96RT7 1819 aa24.11■■□□□ 1.45
PBX3-205ENST00000373492 DCTN1Q14203 1278 aa24.1■■□□□ 1.45
PBX3-205ENST00000373492 RC3H1Q5TC82 1133 aaKnown RBP24.1■■□□□ 1.45
PBX3-205ENST00000373492 PPP1R1BQ9UD71 204 aaPredicted RBP24.1■■□□□ 1.45
PBX3-205ENST00000373492 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
PBX3-205ENST00000373492 KDM3BQ7LBC6 1761 aa24.1■■□□□ 1.45
PBX3-205ENST00000373492 APAF1O14727 1248 aa24.09■■□□□ 1.45
PBX3-205ENST00000373492 SSFA2P28290 1259 aa24.09■■□□□ 1.45
PBX3-205ENST00000373492 SLC39A6Q13433 755 aa24.09■■□□□ 1.45
PBX3-205ENST00000373492 SGIP1Q9BQI5 828 aa24.09■■□□□ 1.45
PBX3-205ENST00000373492 MSH5O43196 834 aa24.08■■□□□ 1.45
PBX3-205ENST00000373492 CNTNAP4Q9C0A0 1308 aa24.08■■□□□ 1.44
PBX3-205ENST00000373492 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
PBX3-205ENST00000373492 GNPATO15228 680 aa24.07■■□□□ 1.44
PBX3-205ENST00000373492 TTC5Q8N0Z6 440 aa24.07■■□□□ 1.44
PBX3-205ENST00000373492 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
PBX3-205ENST00000373492 CICQ96RK0 1608 aaPredicted RBP24.06■■□□□ 1.44
PBX3-205ENST00000373492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.06■■□□□ 1.44
PBX3-205ENST00000373492 ZNF790Q6PG37 636 aa24.05■■□□□ 1.44
PBX3-205ENST00000373492 AMIGO3Q86WK7 504 aa24.05■■□□□ 1.44
PBX3-205ENST00000373492 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
PBX3-205ENST00000373492 UBR3Q6ZT12 1888 aa24.04■■□□□ 1.44
PBX3-205ENST00000373492 TJP1Q07157 1748 aa24.04■■□□□ 1.44
PBX3-205ENST00000373492 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
PBX3-205ENST00000373492 PHF14O94880 888 aa24.04■■□□□ 1.44
PBX3-205ENST00000373492 RTCBQ9Y3I0 505 aaKnown RBP24.04■■□□□ 1.44
PBX3-205ENST00000373492 ADRA2BP18089 450 aa24.03■■□□□ 1.44
PBX3-205ENST00000373492 POLD1P28340 1107 aa24.03■■□□□ 1.44
PBX3-205ENST00000373492 TAF7Q15545 349 aaPredicted RBP24.03■■□□□ 1.44
PBX3-205ENST00000373492 RPS6KA4O75676 772 aa24.02■■□□□ 1.44
PBX3-205ENST00000373492 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
PBX3-205ENST00000373492 THUMPD2Q9BTF0 503 aaKnown RBP24.02■■□□□ 1.44
PBX3-205ENST00000373492 TRIM35Q9UPQ4 493 aa24.02■■□□□ 1.44
PBX3-205ENST00000373492 TRAPPC3LQ5T215 181 aa24.01■■□□□ 1.43
PBX3-205ENST00000373492 DNAJC10Q8IXB1 793 aa24.01■■□□□ 1.43
PBX3-205ENST00000373492 ARXQ96QS3 562 aa24.01■■□□□ 1.43
PBX3-205ENST00000373492 SMIM5Q71RC9 77 aa24■■□□□ 1.43
PBX3-205ENST00000373492 COL24A1Q17RW2 1714 aa24■■□□□ 1.43
PBX3-205ENST00000373492 ZNF496Q96IT1 587 aaPredicted RBP23.99■■□□□ 1.43
PBX3-205ENST00000373492 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
PBX3-205ENST00000373492 MYH14Q7Z406 1995 aaKnown RBP23.99■■□□□ 1.43
PBX3-205ENST00000373492 CYP19A1P11511 503 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms