RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 DDX49Q9Y6V7 483 aaKnown RBP9.2□□□□□ -0.94
GARNL3-202ENST00000373387 ERC2O15083 957 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 RRP9O43818 475 aaKnown RBP9.2□□□□□ -0.94
GARNL3-202ENST00000373387 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
GARNL3-202ENST00000373387 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-202ENST00000373387 OFD1O75665 1012 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 BRD1O95696 1058 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 ACEP12821 1306 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 GOLGA6L22H0YM25 854 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 EPB41L2O43491 1005 aaKnown RBP9.19□□□□□ -0.94
GARNL3-202ENST00000373387 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 HSP90AB2PQ58FF8 381 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 MCTP1Q6DN14 999 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 NSFL1CQ9UNZ2 370 aaKnown RBP9.19□□□□□ -0.94
GARNL3-202ENST00000373387 ADAMTS7Q9UKP4 1686 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 CAMTA1Q9Y6Y1 1673 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 REC8O95072 547 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 TMEM63CQ9P1W3 806 aa9.19□□□□□ -0.94
GARNL3-202ENST00000373387 NOL7Q9UMY1 257 aaKnown RBP9.19□□□□□ -0.94
GARNL3-202ENST00000373387 RGPD2P0DJD1 1756 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 ST18O60284 1047 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 FLT4P35916 1363 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 CCT4P50991 539 aaKnown RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 ANAPC15P60006 121 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 AOX1Q06278 1338 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 MTHFSDQ2M296 383 aaKnown RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 ESYT1Q9BSJ8 1104 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 SOS1Q07889 1333 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 HSP90AA1P07900 732 aaKnown RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 TPM2P07951 284 aa9.18□□□□□ -0.94
GARNL3-202ENST00000373387 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-202ENST00000373387 SLC4A2P04920 1241 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 LRSAM1Q6UWE0 723 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 TMX3Q96JJ7 454 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 TNRQ92752 1358 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
GARNL3-202ENST00000373387 PALD1Q9ULE6 856 aa9.17□□□□□ -0.94
GARNL3-202ENST00000373387 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-202ENST00000373387 FOXO3O43524 673 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 HTATSF1O43719 755 aaKnown RBP9.16□□□□□ -0.94
GARNL3-202ENST00000373387 CHMLP26374 656 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-202ENST00000373387 IL25Q9H293 177 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 PNMA6EA0A0J9YXQ4 647 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 MCM2P49736 904 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 ATP8B2P98198 1209 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 CHAMP1Q96JM3 812 aa9.16□□□□□ -0.94
GARNL3-202ENST00000373387 NFAT5O94916 1531 aa9.15□□□□□ -0.94
GARNL3-202ENST00000373387 HMMRO75330 724 aa9.15□□□□□ -0.94
GARNL3-202ENST00000373387 RBM27Q9P2N5 1060 aaKnown RBP9.15□□□□□ -0.94
GARNL3-202ENST00000373387 F6X3S4 739 aa9.15□□□□□ -0.94
GARNL3-202ENST00000373387 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
GARNL3-202ENST00000373387 PRPF40AO75400 957 aaKnown RBP9.15□□□□□ -0.95
GARNL3-202ENST00000373387 GNAI2P04899 355 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 BABAM1Q9NWV8 329 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 CEMIPQ8WUJ3 1361 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 MX1P20591 662 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 POLA2Q14181 598 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 UNC5CLQ8IV45 518 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 LMTK3Q96Q04 1460 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 EYA1Q99502 592 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 MYH15Q9Y2K3 1946 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
GARNL3-202ENST00000373387 USP42Q9H9J4 1324 aaKnown RBP9.14□□□□□ -0.95
GARNL3-202ENST00000373387 MCM5P33992 734 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 HSPA4P34932 840 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 SSH3Q8TE77 659 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 LRRCC1Q9C099 1032 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 FAM69CQ0P6D2 419 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 FLIIQ13045 1269 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 TTC14Q96N46 770 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 LTKP29376 864 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
GARNL3-202ENST00000373387 MBD3O95983 291 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 KLHL34Q8N239 644 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 TSPYL4Q9UJ04 414 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 NEK4P51957 841 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 TSHZ3Q63HK5 1081 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
GARNL3-202ENST00000373387 MAP3K5Q99683 1374 aa9.12□□□□□ -0.95
GARNL3-202ENST00000373387 MRC1P22897 1456 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 GNAI3P08754 354 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 HSP90AA2PQ14568 343 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-202ENST00000373387 PLPPR3Q6T4P5 718 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 SYCE3A1L190 88 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 TRHP20396 242 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-202ENST00000373387 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
GARNL3-202ENST00000373387 IL17REQ8NFR9 667 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms