RNA–Protein interactions for RNA: ENST00000372826.6

PABPC1L-208, Transcript of poly(A) binding protein cytoplasmic 1 like, human

TSL 5

Gene PABPC1L, Length 854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1L-208	ENST00000372826	SPG7	Q9UQ90	795 aa		13.77	□□□□□ -0.21
PABPC1L-208	ENST00000372826	GTPBP6	O43824	516 aa	Predicted RBP	13.76	□□□□□ -0.21
PABPC1L-208	ENST00000372826	EN1	Q05925	392 aa	Predicted RBP	13.76	□□□□□ -0.21
PABPC1L-208	ENST00000372826	NFE2L2	Q16236	605 aa		13.76	□□□□□ -0.21
PABPC1L-208	ENST00000372826	MTHFSD	Q2M296	383 aa	Known RBP	13.76	□□□□□ -0.21
PABPC1L-208	ENST00000372826	ZCRB1	Q8TBF4	217 aa	Known RBP	13.76	□□□□□ -0.21
PABPC1L-208	ENST00000372826	PCDH11X	Q9BZA7	1347 aa		13.75	□□□□□ -0.21
PABPC1L-208	ENST00000372826	PCDH11Y	Q9BZA8	1340 aa		13.75	□□□□□ -0.21
PABPC1L-208	ENST00000372826	APAF1	O14727	1248 aa		13.75	□□□□□ -0.21
PABPC1L-208	ENST00000372826	TMPO	P42166	694 aa	Known RBP	13.75	□□□□□ -0.21
PABPC1L-208	ENST00000372826	DDB1	Q16531	1140 aa		13.74	□□□□□ -0.21
PABPC1L-208	ENST00000372826	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.74	□□□□□ -0.21
PABPC1L-208	ENST00000372826	MAP3K5	Q99683	1374 aa		13.73	□□□□□ -0.21
PABPC1L-208	ENST00000372826	EXOC5	O00471	708 aa		13.73	□□□□□ -0.21
PABPC1L-208	ENST00000372826	CYP27B1	O15528	508 aa		13.73	□□□□□ -0.21
PABPC1L-208	ENST00000372826	PHKG2	P15735	406 aa		13.73	□□□□□ -0.21
PABPC1L-208	ENST00000372826	R3HDM1	Q15032	1099 aa	Known RBP	13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	AKAP4	Q5JQC9	854 aa		13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	IFNL2	Q8IZJ0	200 aa		13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	NGEF	Q8N5V2	710 aa		13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	RRP7A	Q9Y3A4	280 aa	Known RBP	13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	ADAMTS7	Q9UKP4	1686 aa		13.72	□□□□□ -0.21
PABPC1L-208	ENST00000372826	RIPK4	P57078	832 aa		13.71	□□□□□ -0.21
PABPC1L-208	ENST00000372826	C1orf141	Q5JVX7	400 aa		13.71	□□□□□ -0.21
PABPC1L-208	ENST00000372826	FAM196A	Q6ZSG2	479 aa		13.71	□□□□□ -0.21
PABPC1L-208	ENST00000372826	KDM6A	O15550	1401 aa	Predicted RBP	13.71	□□□□□ -0.22
PABPC1L-208	ENST00000372826	GNAT3	A8MTJ3	354 aa		13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	HTATSF1	O43719	755 aa	Known RBP	13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	LMOD3	Q0VAK6	560 aa		13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	CCDC27	Q2M243	656 aa		13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	MARCH10	Q8NA82	808 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	DDX54	Q8TDD1	881 aa	Known RBP	13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	TRIM35	Q9UPQ4	493 aa		13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SSUH2	Q9Y2M2	353 aa		13.7	□□□□□ -0.22
PABPC1L-208	ENST00000372826	DLG5	Q8TDM6	1919 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	HSP90AB1	P08238	724 aa	Known RBP	13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	PDE3B	Q13370	1112 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	NEUROD2	Q15784	382 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	EZH2	Q15910	746 aa	Known RBP	13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	FAM182B	Q5T319	152 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	CAMKK2	Q96RR4	588 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
PABPC1L-208	ENST00000372826	MRC1	P22897	1456 aa		13.68	□□□□□ -0.22
PABPC1L-208	ENST00000372826	BCL9	O00512	1426 aa		13.68	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SENP3-EIF4A1	A0A087X0R7	540 aa		13.68	□□□□□ -0.22
PABPC1L-208	ENST00000372826	DCAF5	Q96JK2	942 aa		13.68	□□□□□ -0.22
PABPC1L-208	ENST00000372826	TOGARAM1	Q9Y4F4	1720 aa		13.67	□□□□□ -0.22
PABPC1L-208	ENST00000372826	ZNF521	Q96K83	1311 aa		13.67	□□□□□ -0.22
PABPC1L-208	ENST00000372826	MPRIP	Q6WCQ1	1025 aa		13.67	□□□□□ -0.22
PABPC1L-208	ENST00000372826	WWC1	Q8IX03	1113 aa		13.67	□□□□□ -0.22
PABPC1L-208	ENST00000372826	RTF1	Q92541	710 aa	Known RBP	13.67	□□□□□ -0.22
PABPC1L-208	ENST00000372826	RNMT	O43148	476 aa	Known RBP	13.66	□□□□□ -0.22
PABPC1L-208	ENST00000372826	TRIM37	O94972	964 aa		13.66	□□□□□ -0.22
PABPC1L-208	ENST00000372826	MCM10	Q7L590	875 aa		13.66	□□□□□ -0.22
PABPC1L-208	ENST00000372826	IL17RE	Q8NFR9	667 aa		13.66	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SCN11A	Q9UI33	1791 aa		13.66	□□□□□ -0.22
PABPC1L-208	ENST00000372826	ZBED9	Q6R2W3	1325 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SPDYE2B	A6NHP3	402 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	APBA3	O96018	575 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SPDYE6	P0CI01	402 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	DCTN1	Q14203	1278 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SPDYE2	Q495Y8	402 aa		13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	SALL2	Q9Y467	1007 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC1L-208	ENST00000372826	DOT1L	Q8TEK3	1739 aa		13.64	□□□□□ -0.23
PABPC1L-208	ENST00000372826	NBPF14	Q5TI25	921 aa		13.64	□□□□□ -0.23
PABPC1L-208	ENST00000372826	THUMPD2	Q9BTF0	503 aa	Known RBP	13.64	□□□□□ -0.23
PABPC1L-208	ENST00000372826	LGR6	Q9HBX8	967 aa		13.64	□□□□□ -0.23
PABPC1L-208	ENST00000372826	ERVV-2	B6SEH9	535 aa		13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	CALD1	Q05682	793 aa	Known RBP	13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	WDR63	Q8IWG1	891 aa		13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	YTHDC1	Q96MU7	727 aa	Known RBP	13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	SIPA1L3	O60292	1781 aa	Predicted RBP	13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	IL16	Q14005	1332 aa		13.63	□□□□□ -0.23
PABPC1L-208	ENST00000372826	YY1	P25490	414 aa		13.62	□□□□□ -0.23
PABPC1L-208	ENST00000372826	NHS	Q6T4R5	1651 aa		13.62	□□□□□ -0.23
PABPC1L-208	ENST00000372826	VIRMA	Q69YN4	1812 aa	Known RBP	13.62	□□□□□ -0.23
PABPC1L-208	ENST00000372826	TEF	Q10587	303 aa		13.61	□□□□□ -0.23
PABPC1L-208	ENST00000372826	SLC52A2	Q9HAB3	445 aa		13.61	□□□□□ -0.23
PABPC1L-208	ENST00000372826	RIOK3	O14730	519 aa	Known RBP	13.6	□□□□□ -0.23
PABPC1L-208	ENST00000372826	CABP4	P57796	275 aa		13.6	□□□□□ -0.23
PABPC1L-208	ENST00000372826	GSE1	Q14687	1217 aa		13.6	□□□□□ -0.23
PABPC1L-208	ENST00000372826	IFT57	Q9NWB7	429 aa		13.6	□□□□□ -0.23
PABPC1L-208	ENST00000372826	PAPPA	Q13219	1627 aa		13.6	□□□□□ -0.23
PABPC1L-208	ENST00000372826	ZNF853	P0CG23	659 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	PRIM1	P49642	420 aa	Known RBP	13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	GOLGA2	Q08379	1002 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	TAF7	Q15545	349 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	NFATC2IP	Q8NCF5	419 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	SPON1	Q9HCB6	807 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	BABAM1	Q9NWV8	329 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	TMOD3	Q9NYL9	352 aa		13.59	□□□□□ -0.23
PABPC1L-208	ENST00000372826	ITGB4	P16144	1822 aa		13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	STK25	O00506	426 aa		13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	GNAI1	P63096	354 aa		13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	ACSBG1	Q96GR2	724 aa		13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	TNS1	Q9HBL0	1735 aa	Known RBP	13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	KDM3B	Q7LBC6	1761 aa		13.58	□□□□□ -0.24
PABPC1L-208	ENST00000372826	SBF2	Q86WG5	1849 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms