RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 GUCY1B3Q02153 619 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 KRT32Q14532 448 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 CFAP45Q9UL16 551 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.39
RLF-201ENST00000372771 AIDAQ96BJ3 306 aa17.52■□□□□ 0.39
RLF-201ENST00000372771 PPP1R1BQ9UD71 204 aaPredicted RBP17.52■□□□□ 0.39
RLF-201ENST00000372771 UQCRHLA0A096LP55 91 aa17.51■□□□□ 0.39
RLF-201ENST00000372771 UQCRHP07919 91 aa17.51■□□□□ 0.39
RLF-201ENST00000372771 RBM5P52756 815 aaKnown RBP eCLIP17.51■□□□□ 0.39
RLF-201ENST00000372771 PPFIBP1Q86W92 1011 aa17.51■□□□□ 0.39
RLF-201ENST00000372771 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
RLF-201ENST00000372771 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
RLF-201ENST00000372771 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
RLF-201ENST00000372771 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
RLF-201ENST00000372771 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
RLF-201ENST00000372771 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
RLF-201ENST00000372771 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
RLF-201ENST00000372771 TANGO6Q9C0B7 1094 aa17.5■□□□□ 0.39
RLF-201ENST00000372771 ESPNB1AK53 854 aa17.5■□□□□ 0.39
RLF-201ENST00000372771 FLIIQ13045 1269 aa17.49■□□□□ 0.39
RLF-201ENST00000372771 CCP110O43303 1012 aa17.49■□□□□ 0.39
RLF-201ENST00000372771 CDKL5O76039 1030 aa17.49■□□□□ 0.39
RLF-201ENST00000372771 IGHMBP2P38935 993 aaKnown RBP17.49■□□□□ 0.39
RLF-201ENST00000372771 C14orf93Q9H972 538 aaKnown RBP17.49■□□□□ 0.39
RLF-201ENST00000372771 GDPD2Q9HCC8 539 aa17.49■□□□□ 0.39
RLF-201ENST00000372771 IFIT1P09914 478 aaKnown RBP17.49■□□□□ 0.39
RLF-201ENST00000372771 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
RLF-201ENST00000372771 FANCAO15360 1455 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
RLF-201ENST00000372771 PHF8Q9UPP1 1060 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 STARD3NLO95772 234 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 DACH1Q9UI36 760 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 NOL7Q9UMY1 257 aaKnown RBP17.48■□□□□ 0.39
RLF-201ENST00000372771 CEP57L1Q8IYX8 460 aa17.48■□□□□ 0.39
RLF-201ENST00000372771 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
RLF-201ENST00000372771 GPATCH8Q9UKJ3 1502 aaKnown RBP17.47■□□□□ 0.39
RLF-201ENST00000372771 ANXA1P04083 346 aa17.47■□□□□ 0.39
RLF-201ENST00000372771 TMEM132AQ24JP5 1023 aa17.47■□□□□ 0.39
RLF-201ENST00000372771 SSBP05455 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
RLF-201ENST00000372771 MINDY4BA8MYZ0 360 aa17.47■□□□□ 0.39
RLF-201ENST00000372771 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
RLF-201ENST00000372771 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
RLF-201ENST00000372771 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
RLF-201ENST00000372771 DEF6Q9H4E7 631 aa17.46■□□□□ 0.39
RLF-201ENST00000372771 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
RLF-201ENST00000372771 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
RLF-201ENST00000372771 MAP7D2Q96T17 732 aa17.45■□□□□ 0.38
RLF-201ENST00000372771 STIM1Q13586 685 aa17.45■□□□□ 0.38
RLF-201ENST00000372771 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
RLF-201ENST00000372771 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
RLF-201ENST00000372771 PTPRCP08575 1304 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 CCT2P78371 535 aaKnown RBP17.44■□□□□ 0.38
RLF-201ENST00000372771 USP5P45974 858 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 CDR1P51861 262 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 ZBTB3Q9H5J0 574 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 ACEP12821 1306 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
RLF-201ENST00000372771 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
RLF-201ENST00000372771 CBFA2T2O43439 604 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 A0A087WZG4 1122 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 GPTP24298 496 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 AXDND1Q5T1B0 1012 aaPredicted RBP17.43■□□□□ 0.38
RLF-201ENST00000372771 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
RLF-201ENST00000372771 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
RLF-201ENST00000372771 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
RLF-201ENST00000372771 RBM27Q9P2N5 1060 aaKnown RBP17.42■□□□□ 0.38
RLF-201ENST00000372771 SYCP1Q15431 976 aa17.42■□□□□ 0.38
RLF-201ENST00000372771 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
RLF-201ENST00000372771 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
RLF-201ENST00000372771 PI4KAP2A4QPH2 592 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 PI4KAP1Q8N8J0 262 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 NSD2O96028 1365 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 IFIT5Q13325 482 aaKnown RBP17.41■□□□□ 0.38
RLF-201ENST00000372771 RAB11FIP4Q86YS3 637 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 LIMCH1Q9UPQ0 1083 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 RAPGEF6Q8TEU7 1601 aa17.41■□□□□ 0.38
RLF-201ENST00000372771 GJB2P29033 226 aa17.4■□□□□ 0.38
RLF-201ENST00000372771 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
RLF-201ENST00000372771 TRMT112Q9UI30 125 aaKnown RBP17.4■□□□□ 0.38
RLF-201ENST00000372771 BMP2KLQ5H9B9 411 aa17.4■□□□□ 0.38
RLF-201ENST00000372771 NAPBQ9H115 298 aa17.4■□□□□ 0.38
RLF-201ENST00000372771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.4■□□□□ 0.38
RLF-201ENST00000372771 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
RLF-201ENST00000372771 WASF1Q92558 559 aa17.4■□□□□ 0.38
RLF-201ENST00000372771 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
RLF-201ENST00000372771 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms