RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
SMARCA1-201ENST00000371121 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
SMARCA1-201ENST00000371121 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 PDE1AP54750 535 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 ERBB3P21860 1342 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 ESYT1Q9BSJ8 1104 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 FAM53CQ9NYF3 392 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 CRYBG1Q9Y4K1 1723 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 ZFYVE9O95405 1425 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 MX1P20591 662 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 FAM184AQ8NB25 1140 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 YTHDC2Q9H6S0 1430 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 IL13P35225 146 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 CCDC183Q5T5S1 534 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 REC8O95072 547 aa14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 LRMPQ12912 555 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 ST3GAL1Q11201 340 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 VGLL3A8MV65 326 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 CHMLP26374 656 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 TTC14Q96N46 770 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 LARGE1O95461 756 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 GNAI1P63096 354 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 COL9A3Q14050 684 aaPredicted RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 PTGS1P23219 599 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 SPC24Q8NBT2 197 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 MORC2Q9Y6X9 1032 aaPredicted RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 FEZ1Q99689 392 aa14.08□□□□□ -0.15
SMARCA1-201ENST00000371121 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.15
SMARCA1-201ENST00000371121 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 ST7Q9NRC1 585 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMS1Q86UR5 1692 aaKnown RBP14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 SYT1P21579 422 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 UBE2HP62256 183 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 CAPN2P17655 700 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ANAPC15P60006 121 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ZSCAN22P10073 491 aaPredicted RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 MCM2P49736 904 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 TERF2Q15554 542 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 EXOC6BQ9Y2D4 811 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 PHF14O94880 888 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 HSPA4P34932 840 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 G2E3Q7L622 706 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 FAM208AQ9UK61 1670 aaKnown RBP14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CABP1Q9NZU7 370 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 PDE4CQ08493 712 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 SYCP1Q15431 976 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CCDC144BQ3MJ40 725 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CPS1P31327 1500 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 CPA1P15085 419 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 C16orf45Q96MC5 204 aaPredicted RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 STK26Q9P289 416 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 DNM1Q05193 864 aaKnown RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 LUZP1Q86V48 1076 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 F13A1P00488 732 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms