RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
SMARCA1-201ENST00000371121 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
SMARCA1-201ENST00000371121 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 PDE1AP54750 535 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 ERBB3P21860 1342 aa14.15□□□□□ -0.14
SMARCA1-201ENST00000371121 ESYT1Q9BSJ8 1104 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 FAM53CQ9NYF3 392 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 CRYBG1Q9Y4K1 1723 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 ZFYVE9O95405 1425 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 MX1P20591 662 aa14.14□□□□□ -0.15
SMARCA1-201ENST00000371121 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 FAM184AQ8NB25 1140 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 YTHDC2Q9H6S0 1430 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 IL13P35225 146 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 CCDC183Q5T5S1 534 aa14.13□□□□□ -0.15
SMARCA1-201ENST00000371121 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 REC8O95072 547 aa14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
SMARCA1-201ENST00000371121 LRMPQ12912 555 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 ST3GAL1Q11201 340 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
SMARCA1-201ENST00000371121 VGLL3A8MV65 326 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 CHMLP26374 656 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 TTC14Q96N46 770 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 LARGE1O95461 756 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 GNAI1P63096 354 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 COL9A3Q14050 684 aaPredicted RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
SMARCA1-201ENST00000371121 PTGS1P23219 599 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 SPC24Q8NBT2 197 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 MORC2Q9Y6X9 1032 aaPredicted RBP14.09□□□□□ -0.15
SMARCA1-201ENST00000371121 FEZ1Q99689 392 aa14.08□□□□□ -0.15
SMARCA1-201ENST00000371121 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.15
SMARCA1-201ENST00000371121 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 ST7Q9NRC1 585 aa14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMS1Q86UR5 1692 aaKnown RBP14.08□□□□□ -0.16
SMARCA1-201ENST00000371121 SYT1P21579 422 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 UBE2HP62256 183 aa14.07□□□□□ -0.16
SMARCA1-201ENST00000371121 CAPN2P17655 700 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ANAPC15P60006 121 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ZSCAN22P10073 491 aaPredicted RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 MCM2P49736 904 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 TERF2Q15554 542 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 EXOC6BQ9Y2D4 811 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 PHF14O94880 888 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 HSPA4P34932 840 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 G2E3Q7L622 706 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
SMARCA1-201ENST00000371121 FAM208AQ9UK61 1670 aaKnown RBP14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CABP1Q9NZU7 370 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 PDE4CQ08493 712 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 SYCP1Q15431 976 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CCDC144BQ3MJ40 725 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
SMARCA1-201ENST00000371121 CPS1P31327 1500 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 CPA1P15085 419 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 C16orf45Q96MC5 204 aaPredicted RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 STK26Q9P289 416 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 DNM1Q05193 864 aaKnown RBP14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 LUZP1Q86V48 1076 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
SMARCA1-201ENST00000371121 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 F13A1P00488 732 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms