RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 PHF14O94880 888 aa15.38■□□□□ 0.05
EXOSC1-204ENST00000370902 SSFA2P28290 1259 aa15.38■□□□□ 0.05
EXOSC1-204ENST00000370902 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
EXOSC1-204ENST00000370902 AK7Q96M32 723 aa15.38■□□□□ 0.05
EXOSC1-204ENST00000370902 ATG3Q9NT62 314 aa15.37■□□□□ 0.05
EXOSC1-204ENST00000370902 VIRMAQ69YN4 1812 aaKnown RBP15.37■□□□□ 0.05
EXOSC1-204ENST00000370902 C10orf71Q711Q0 1435 aa15.36■□□□□ 0.05
EXOSC1-204ENST00000370902 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
EXOSC1-204ENST00000370902 SCN11AQ9UI33 1791 aa15.36■□□□□ 0.05
EXOSC1-204ENST00000370902 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
EXOSC1-204ENST00000370902 ARFGEF1Q9Y6D6 1849 aa15.34■□□□□ 0.05
EXOSC1-204ENST00000370902 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
EXOSC1-204ENST00000370902 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
EXOSC1-204ENST00000370902 GNPATO15228 680 aa15.33■□□□□ 0.04
EXOSC1-204ENST00000370902 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
EXOSC1-204ENST00000370902 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
EXOSC1-204ENST00000370902 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
EXOSC1-204ENST00000370902 MRC1P22897 1456 aa15.3■□□□□ 0.04
EXOSC1-204ENST00000370902 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
EXOSC1-204ENST00000370902 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
EXOSC1-204ENST00000370902 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
EXOSC1-204ENST00000370902 KIF3CO14782 793 aa15.29■□□□□ 0.04
EXOSC1-204ENST00000370902 MMP10P09238 476 aa15.29■□□□□ 0.04
EXOSC1-204ENST00000370902 AEBP1Q8IUX7 1158 aa15.29■□□□□ 0.04
EXOSC1-204ENST00000370902 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
EXOSC1-204ENST00000370902 GPBP1L1Q9HC44 474 aaPredicted RBP15.28■□□□□ 0.04
EXOSC1-204ENST00000370902 UBR2Q8IWV8 1755 aa15.28■□□□□ 0.04
EXOSC1-204ENST00000370902 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
EXOSC1-204ENST00000370902 DLEC1Q9Y238 1755 aa15.27■□□□□ 0.04
EXOSC1-204ENST00000370902 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.04
EXOSC1-204ENST00000370902 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
EXOSC1-204ENST00000370902 GYS1P13807 737 aa15.27■□□□□ 0.04
EXOSC1-204ENST00000370902 ZNF526Q8TF50 670 aaPredicted RBP15.27■□□□□ 0.04
EXOSC1-204ENST00000370902 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
EXOSC1-204ENST00000370902 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
EXOSC1-204ENST00000370902 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
EXOSC1-204ENST00000370902 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
EXOSC1-204ENST00000370902 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
EXOSC1-204ENST00000370902 HSPA6P17066 643 aa15.25■□□□□ 0.03
EXOSC1-204ENST00000370902 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
EXOSC1-204ENST00000370902 PANK3Q9H999 370 aa15.25■□□□□ 0.03
EXOSC1-204ENST00000370902 SBF1O95248 1867 aa15.25■□□□□ 0.03
EXOSC1-204ENST00000370902 ADRA2BP18089 450 aa15.24■□□□□ 0.03
EXOSC1-204ENST00000370902 KCNA3P22001 575 aa15.24■□□□□ 0.03
EXOSC1-204ENST00000370902 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
EXOSC1-204ENST00000370902 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
EXOSC1-204ENST00000370902 RPS6KA4O75676 772 aa15.23■□□□□ 0.03
EXOSC1-204ENST00000370902 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
EXOSC1-204ENST00000370902 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 TGFB2P61812 414 aa15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 DDR1Q08345 913 aa15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
EXOSC1-204ENST00000370902 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 DPEP1P16444 411 aa15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 IL13P35225 146 aa15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.03
EXOSC1-204ENST00000370902 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
EXOSC1-204ENST00000370902 CRKLP46109 303 aaKnown RBP15.2■□□□□ 0.02
EXOSC1-204ENST00000370902 IFFO2Q5TF58 517 aa15.2■□□□□ 0.02
EXOSC1-204ENST00000370902 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
EXOSC1-204ENST00000370902 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
EXOSC1-204ENST00000370902 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
EXOSC1-204ENST00000370902 FKBP8Q14318 412 aa15.19■□□□□ 0.02
EXOSC1-204ENST00000370902 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
EXOSC1-204ENST00000370902 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
EXOSC1-204ENST00000370902 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 TIAM2Q8IVF5 1701 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 PCNTO95613 3336 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 CABP4P57796 275 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 INTS5Q6P9B9 1019 aaKnown RBP15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 CCDC87Q9NVE4 849 aa15.18■□□□□ 0.02
EXOSC1-204ENST00000370902 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
EXOSC1-204ENST00000370902 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
EXOSC1-204ENST00000370902 MTHFSP49914 203 aa15.17■□□□□ 0.02
EXOSC1-204ENST00000370902 RFC4P35249 363 aa15.16■□□□□ 0.02
EXOSC1-204ENST00000370902 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
EXOSC1-204ENST00000370902 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
EXOSC1-204ENST00000370902 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
EXOSC1-204ENST00000370902 TM4SF1P30408 202 aa15.15■□□□□ 0.02
EXOSC1-204ENST00000370902 MORC1Q86VD1 984 aa15.15■□□□□ 0.02
EXOSC1-204ENST00000370902 FCHSD2O94868 740 aa15.14■□□□□ 0.01
EXOSC1-204ENST00000370902 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
EXOSC1-204ENST00000370902 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
EXOSC1-204ENST00000370902 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
EXOSC1-204ENST00000370902 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
EXOSC1-204ENST00000370902 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
EXOSC1-204ENST00000370902 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
EXOSC1-204ENST00000370902 CHRNA5P30532 468 aa15.13■□□□□ 0.01
EXOSC1-204ENST00000370902 CCDC88AQ3V6T2 1871 aa15.13■□□□□ 0.01
EXOSC1-204ENST00000370902 AKAP4Q5JQC9 854 aa15.13■□□□□ 0.01
EXOSC1-204ENST00000370902 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms