RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
PRDM1-203ENST00000369096 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
PRDM1-203ENST00000369096 FKBP15Q5T1M5 1219 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 VPS36Q86VN1 386 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 CEP131Q9UPN4 1083 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
PRDM1-203ENST00000369096 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
PRDM1-203ENST00000369096 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
PRDM1-203ENST00000369096 CBX1P83916 185 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
PRDM1-203ENST00000369096 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
PRDM1-203ENST00000369096 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 PAFAH1B1P43034 410 aa18.35■□□□□ 0.53
PRDM1-203ENST00000369096 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 CCDC175P0C221 793 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
PRDM1-203ENST00000369096 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
PRDM1-203ENST00000369096 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
PRDM1-203ENST00000369096 POLR3GO15318 223 aaPredicted RBP18.33■□□□□ 0.53
PRDM1-203ENST00000369096 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.53
PRDM1-203ENST00000369096 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
PRDM1-203ENST00000369096 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
PRDM1-203ENST00000369096 PPM1EQ8WY54 764 aa18.33■□□□□ 0.52
PRDM1-203ENST00000369096 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
PRDM1-203ENST00000369096 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
PRDM1-203ENST00000369096 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
PRDM1-203ENST00000369096 MYZAPP0CAP1 466 aa18.32■□□□□ 0.52
PRDM1-203ENST00000369096 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
PRDM1-203ENST00000369096 COMMD10Q9Y6G5 202 aa18.32■□□□□ 0.52
PRDM1-203ENST00000369096 CASQ1P31415 396 aa18.32■□□□□ 0.52
PRDM1-203ENST00000369096 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
PRDM1-203ENST00000369096 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
PRDM1-203ENST00000369096 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 TSG101Q99816 390 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 MCM3P25205 808 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRDM1-203ENST00000369096 TNIP1Q15025 636 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 DNAI2Q9GZS0 605 aa18.31■□□□□ 0.52
PRDM1-203ENST00000369096 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
PRDM1-203ENST00000369096 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
PRDM1-203ENST00000369096 PTPRGP23470 1445 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 CTNNA2P26232 953 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
PRDM1-203ENST00000369096 CCDC83Q8IWF9 413 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 TNNT1P13805 278 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
PRDM1-203ENST00000369096 CFAP70Q5T0N1 1121 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
PRDM1-203ENST00000369096 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
PRDM1-203ENST00000369096 MICALCLQ6ZW33 695 aa18.3■□□□□ 0.52
PRDM1-203ENST00000369096 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
PRDM1-203ENST00000369096 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
PRDM1-203ENST00000369096 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 BICDL1Q6ZP65 573 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 PSMD1Q99460 953 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
PRDM1-203ENST00000369096 MINDY4BA8MYZ0 360 aa18.27■□□□□ 0.52
PRDM1-203ENST00000369096 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
PRDM1-203ENST00000369096 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 TRMT1Q9NXH9 659 aaKnown RBP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 IGHMBP2P38935 993 aaKnown RBP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 SCAND2PQ9GZW5 306 aaPredicted RBP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 GTF2F1P35269 517 aaKnown RBP eCLIP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 CALCOCO1Q9P1Z2 691 aa18.27■□□□□ 0.52
PRDM1-203ENST00000369096 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.52
PRDM1-203ENST00000369096 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.51
PRDM1-203ENST00000369096 IFT140Q96RY7 1462 aa18.27■□□□□ 0.51
PRDM1-203ENST00000369096 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 TMX1Q9H3N1 280 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
PRDM1-203ENST00000369096 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 TMCO5BA8MYB1 307 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
PRDM1-203ENST00000369096 CGNQ9P2M7 1197 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms