RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
NUP43-203ENST00000367404 GOLGB1Q14789 3259 aaKnown RBP13.86□□□□□ -0.19
NUP43-203ENST00000367404 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
NUP43-203ENST00000367404 COG3Q96JB2 828 aa13.86□□□□□ -0.19
NUP43-203ENST00000367404 DOT1LQ8TEK3 1739 aa13.86□□□□□ -0.19
NUP43-203ENST00000367404 LY75O60449 1722 aa13.85□□□□□ -0.19
NUP43-203ENST00000367404 POLD1P28340 1107 aa13.85□□□□□ -0.19
NUP43-203ENST00000367404 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
NUP43-203ENST00000367404 MAMSTRQ6ZN01 415 aa13.85□□□□□ -0.19
NUP43-203ENST00000367404 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
NUP43-203ENST00000367404 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
NUP43-203ENST00000367404 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
NUP43-203ENST00000367404 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
NUP43-203ENST00000367404 KCNQ4P56696 695 aa13.83□□□□□ -0.2
NUP43-203ENST00000367404 C1QTNF8P60827 252 aa13.83□□□□□ -0.2
NUP43-203ENST00000367404 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.2
NUP43-203ENST00000367404 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
NUP43-203ENST00000367404 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
NUP43-203ENST00000367404 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 FBLN1P23142 703 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 AMPHP49418 695 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 PSEN1P49768 467 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 GPR162Q16538 588 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 CHD4Q14839 1912 aa13.82□□□□□ -0.2
NUP43-203ENST00000367404 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
NUP43-203ENST00000367404 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
NUP43-203ENST00000367404 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
NUP43-203ENST00000367404 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
NUP43-203ENST00000367404 USP47Q96K76 1375 aa13.8□□□□□ -0.2
NUP43-203ENST00000367404 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
NUP43-203ENST00000367404 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
NUP43-203ENST00000367404 FYB1O15117 783 aa13.79□□□□□ -0.2
NUP43-203ENST00000367404 PLCG2P16885 1265 aa13.79□□□□□ -0.2
NUP43-203ENST00000367404 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
NUP43-203ENST00000367404 INSRP06213 1382 aa13.79□□□□□ -0.2
NUP43-203ENST00000367404 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
NUP43-203ENST00000367404 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
NUP43-203ENST00000367404 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 FLT4P35916 1363 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 PDAP1Q13442 181 aaKnown RBP13.77□□□□□ -0.21
NUP43-203ENST00000367404 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 RAPGEF4Q8WZA2 1011 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
NUP43-203ENST00000367404 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
NUP43-203ENST00000367404 YBX3P16989 372 aaKnown RBP eCLIP13.76□□□□□ -0.211e-8■□□□□ 10.1
NUP43-203ENST00000367404 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
NUP43-203ENST00000367404 C5P01031 1676 aa13.75□□□□□ -0.21
NUP43-203ENST00000367404 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
NUP43-203ENST00000367404 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
NUP43-203ENST00000367404 TATP17735 454 aaPredicted RBP13.75□□□□□ -0.21
NUP43-203ENST00000367404 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
NUP43-203ENST00000367404 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
NUP43-203ENST00000367404 TMF1P82094 1093 aa13.74□□□□□ -0.21
NUP43-203ENST00000367404 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
NUP43-203ENST00000367404 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 CYP27B1O15528 508 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 PKD1L3Q7Z443 1732 aa13.73□□□□□ -0.21
NUP43-203ENST00000367404 ADCY9O60503 1353 aa13.72□□□□□ -0.21
NUP43-203ENST00000367404 C4BP0C0L5 1744 aa13.71□□□□□ -0.21
NUP43-203ENST00000367404 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
NUP43-203ENST00000367404 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
NUP43-203ENST00000367404 ATP10DQ9P241 1426 aa13.71□□□□□ -0.22
NUP43-203ENST00000367404 KIF20BQ96Q89 1820 aa13.71□□□□□ -0.22
NUP43-203ENST00000367404 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
NUP43-203ENST00000367404 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
NUP43-203ENST00000367404 AMIGO3Q86WK7 504 aa13.7□□□□□ -0.22
NUP43-203ENST00000367404 SMARCC1Q92922 1105 aaPredicted RBP13.7□□□□□ -0.22
NUP43-203ENST00000367404 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
NUP43-203ENST00000367404 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
NUP43-203ENST00000367404 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
NUP43-203ENST00000367404 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
NUP43-203ENST00000367404 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
NUP43-203ENST00000367404 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
NUP43-203ENST00000367404 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
NUP43-203ENST00000367404 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
NUP43-203ENST00000367404 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
NUP43-203ENST00000367404 SSFA2P28290 1259 aa13.67□□□□□ -0.22
NUP43-203ENST00000367404 PIGBQ92521 554 aa13.67□□□□□ -0.22
NUP43-203ENST00000367404 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
NUP43-203ENST00000367404 AK7Q96M32 723 aa13.67□□□□□ -0.22
NUP43-203ENST00000367404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■□□□□ 8.7
NUP43-203ENST00000367404 MAP2P11137 1827 aaKnown RBP13.66□□□□□ -0.22
NUP43-203ENST00000367404 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.22
NUP43-203ENST00000367404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
NUP43-203ENST00000367404 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 SIK1P57059 783 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
NUP43-203ENST00000367404 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
NUP43-203ENST00000367404 ITGB4P16144 1822 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms