RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 CTSOP43234 321 aaPredicted RBP12.84□□□□□ -0.35
H3F3A-201ENST00000366813 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
H3F3A-201ENST00000366813 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
H3F3A-201ENST00000366813 WDR7Q9Y4E6 1490 aa12.83□□□□□ -0.35
H3F3A-201ENST00000366813 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
H3F3A-201ENST00000366813 ADH1AP07327 375 aa12.83□□□□□ -0.36
H3F3A-201ENST00000366813 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
H3F3A-201ENST00000366813 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
H3F3A-201ENST00000366813 APBB1O00213 710 aa12.82□□□□□ -0.36
H3F3A-201ENST00000366813 CYLDQ9NQC7 956 aa12.82□□□□□ -0.36
H3F3A-201ENST00000366813 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
H3F3A-201ENST00000366813 LILRA1O75019 489 aa12.81□□□□□ -0.36
H3F3A-201ENST00000366813 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
H3F3A-201ENST00000366813 PTGIRP43119 386 aa12.8□□□□□ -0.36
H3F3A-201ENST00000366813 MCCD1P59942 119 aaPredicted RBP12.8□□□□□ -0.36
H3F3A-201ENST00000366813 IGF1RP08069 1367 aa12.8□□□□□ -0.36
H3F3A-201ENST00000366813 NR1H3Q13133 447 aa12.79□□□□□ -0.36
H3F3A-201ENST00000366813 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
H3F3A-201ENST00000366813 CCDC155Q8N6L0 562 aa12.79□□□□□ -0.36
H3F3A-201ENST00000366813 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
H3F3A-201ENST00000366813 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
H3F3A-201ENST00000366813 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
H3F3A-201ENST00000366813 RIMS1Q86UR5 1692 aaKnown RBP12.78□□□□□ -0.36
H3F3A-201ENST00000366813 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
H3F3A-201ENST00000366813 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
H3F3A-201ENST00000366813 MTMR14Q8NCE2 650 aa12.76□□□□□ -0.37
H3F3A-201ENST00000366813 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
H3F3A-201ENST00000366813 ESF1Q9H501 851 aaKnown RBP12.76□□□□□ -0.37
H3F3A-201ENST00000366813 DISP1Q96F81 1524 aa12.75□□□□□ -0.37
H3F3A-201ENST00000366813 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
H3F3A-201ENST00000366813 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
H3F3A-201ENST00000366813 LORP23490 312 aaPredicted RBP12.74□□□□□ -0.37
H3F3A-201ENST00000366813 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
H3F3A-201ENST00000366813 KDF1Q8NAX2 398 aaPredicted RBP12.73□□□□□ -0.37
H3F3A-201ENST00000366813 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
H3F3A-201ENST00000366813 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
H3F3A-201ENST00000366813 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
H3F3A-201ENST00000366813 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
H3F3A-201ENST00000366813 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
H3F3A-201ENST00000366813 CDC14CA4D256 554 aa12.71□□□□□ -0.37
H3F3A-201ENST00000366813 MEN1O00255 615 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 ITGA6P23229 1130 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 PRICKLE2Q7Z3G6 844 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 VWA5B2Q8N398 1253 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 NANOS1Q8WY41 292 aaKnown RBP12.7□□□□□ -0.38
H3F3A-201ENST00000366813 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
H3F3A-201ENST00000366813 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
H3F3A-201ENST00000366813 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
H3F3A-201ENST00000366813 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
H3F3A-201ENST00000366813 MLECQ14165 292 aa12.68□□□□□ -0.38
H3F3A-201ENST00000366813 RNF144AP50876 292 aaPredicted RBP12.67□□□□□ -0.38
H3F3A-201ENST00000366813 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
H3F3A-201ENST00000366813 COL25A1Q9BXS0 654 aaPredicted RBP12.67□□□□□ -0.38
H3F3A-201ENST00000366813 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
H3F3A-201ENST00000366813 A0A1W2PRU2 124 aa12.66□□□□□ -0.38
H3F3A-201ENST00000366813 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
H3F3A-201ENST00000366813 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
H3F3A-201ENST00000366813 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
H3F3A-201ENST00000366813 PHLDB1Q86UU1 1377 aa12.65□□□□□ -0.38
H3F3A-201ENST00000366813 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 RHOQP17081 205 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
H3F3A-201ENST00000366813 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 CYP2U1Q7Z449 544 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 LTBP4Q8N2S1 1624 aa12.64□□□□□ -0.39
H3F3A-201ENST00000366813 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
H3F3A-201ENST00000366813 UBAP1LF5GYI3 381 aa12.63□□□□□ -0.39
H3F3A-201ENST00000366813 FRMPD1Q5SYB0 1578 aa12.63□□□□□ -0.39
H3F3A-201ENST00000366813 GPR37L1O60883 481 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 GPC1P35052 558 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 KRT76Q01546 638 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 CEP126Q9P2H0 1117 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 SCTRP47872 440 aa12.62□□□□□ -0.39
H3F3A-201ENST00000366813 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
H3F3A-201ENST00000366813 FLIIQ13045 1269 aa12.61□□□□□ -0.39
H3F3A-201ENST00000366813 PTPRTO14522 1441 aa12.6□□□□□ -0.39
H3F3A-201ENST00000366813 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
H3F3A-201ENST00000366813 KIAA0556O60303 1618 aa12.6□□□□□ -0.39
H3F3A-201ENST00000366813 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
H3F3A-201ENST00000366813 MYCP01106 439 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-201ENST00000366813 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
H3F3A-201ENST00000366813 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-201ENST00000366813 POU4F2Q12837 409 aa12.59□□□□□ -0.39
H3F3A-201ENST00000366813 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
H3F3A-201ENST00000366813 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 CLN3Q13286 438 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 RIPOR1Q6ZS17 1223 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 NEO1Q92859 1461 aa12.58□□□□□ -0.4
H3F3A-201ENST00000366813 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
H3F3A-201ENST00000366813 FANCAO15360 1455 aa12.57□□□□□ -0.4
H3F3A-201ENST00000366813 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
H3F3A-201ENST00000366813 HSPA1LP34931 641 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms