RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PRDM10Q9NQV6 1147 aa19.43■□□□□ 0.7
NID1-202ENST00000366595 DAAM2Q86T65 1068 aa19.42■□□□□ 0.7
NID1-202ENST00000366595 U3KPZ7 1027 aaPredicted RBP19.42■□□□□ 0.7
NID1-202ENST00000366595 NSRP1Q9H0G5 558 aaKnown RBP19.42■□□□□ 0.7
NID1-202ENST00000366595 GPRASP1Q5JY77 1395 aa19.42■□□□□ 0.7
NID1-202ENST00000366595 HLTFQ14527 1009 aaKnown RBP eCLIP19.42■□□□□ 0.7
NID1-202ENST00000366595 UVSSAQ2YD98 709 aa19.42■□□□□ 0.7
NID1-202ENST00000366595 IBSPP21815 317 aaPredicted RBP19.42■□□□□ 0.7
NID1-202ENST00000366595 CEP126Q9P2H0 1117 aa19.42■□□□□ 0.7
NID1-202ENST00000366595 ATF3P18847 181 aa19.42■□□□□ 0.7
NID1-202ENST00000366595 PYM1Q9BRP8 204 aaKnown RBP19.42■□□□□ 0.7
NID1-202ENST00000366595 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
NID1-202ENST00000366595 HMGB1P09429 215 aaKnown RBP19.41■□□□□ 0.7
NID1-202ENST00000366595 CETN1Q12798 172 aa19.41■□□□□ 0.7
NID1-202ENST00000366595 MPHOSPH8Q99549 860 aa19.41■□□□□ 0.7
NID1-202ENST00000366595 NUP88Q99567 741 aaPredicted RBP19.41■□□□□ 0.7
NID1-202ENST00000366595 LMAN1P49257 510 aa19.4■□□□□ 0.7
NID1-202ENST00000366595 PPP4R3AQ6IN85 833 aa19.4■□□□□ 0.7
NID1-202ENST00000366595 CCDC150Q8NCX0 1101 aa19.4■□□□□ 0.7
NID1-202ENST00000366595 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
NID1-202ENST00000366595 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
NID1-202ENST00000366595 DDX23Q9BUQ8 820 aaKnown RBP19.4■□□□□ 0.7
NID1-202ENST00000366595 CASTP20810 708 aaKnown RBP19.39■□□□□ 0.7
NID1-202ENST00000366595 CAMK4Q16566 473 aa19.39■□□□□ 0.69
NID1-202ENST00000366595 IFI16Q16666 785 aaKnown RBP19.39■□□□□ 0.69
NID1-202ENST00000366595 KRT222Q8N1A0 295 aa19.39■□□□□ 0.69
NID1-202ENST00000366595 SREK1Q8WXA9 508 aaKnown RBP19.39■□□□□ 0.69
NID1-202ENST00000366595 CTNNBL1Q8WYA6 563 aaPredicted RBP19.39■□□□□ 0.69
NID1-202ENST00000366595 CKAP4Q07065 602 aaKnown RBP19.39■□□□□ 0.69
NID1-202ENST00000366595 PPP4R3BQ5MIZ7 849 aa19.39■□□□□ 0.69
NID1-202ENST00000366595 CWC27Q6UX04 472 aaKnown RBP19.39■□□□□ 0.69
NID1-202ENST00000366595 TSNARE1Q96NA8 513 aa19.39■□□□□ 0.69
NID1-202ENST00000366595 TUBB4AP04350 444 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 FAM114A1Q8IWE2 563 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 FERMT1Q9BQL6 677 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
NID1-202ENST00000366595 GTF2A1P52655 376 aaPredicted RBP19.38■□□□□ 0.69
NID1-202ENST00000366595 HSF2BPO75031 334 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 CTNNA2P26232 953 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 SNW1Q13573 536 aaKnown RBP19.38■□□□□ 0.69
NID1-202ENST00000366595 TDRD12Q587J7 1177 aaKnown RBP19.38■□□□□ 0.69
NID1-202ENST00000366595 SEC63Q9UGP8 760 aaKnown RBP19.38■□□□□ 0.69
NID1-202ENST00000366595 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 MAATS1Q7Z4T9 603 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 CCDC155Q8N6L0 562 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 JPH4Q96JJ6 628 aa19.38■□□□□ 0.69
NID1-202ENST00000366595 CCDC171Q6TFL3 1326 aa19.37■□□□□ 0.69
NID1-202ENST00000366595 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
NID1-202ENST00000366595 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
NID1-202ENST00000366595 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
NID1-202ENST00000366595 STX1AQ16623 288 aa19.37■□□□□ 0.69
NID1-202ENST00000366595 GOLIM4O00461 696 aa19.37■□□□□ 0.69
NID1-202ENST00000366595 RAB11FIP3O75154 756 aa19.37■□□□□ 0.69
NID1-202ENST00000366595 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
NID1-202ENST00000366595 SIL1Q9H173 461 aa19.36■□□□□ 0.69
NID1-202ENST00000366595 CCDC6Q16204 474 aa19.36■□□□□ 0.69
NID1-202ENST00000366595 C16orf45Q96MC5 204 aaPredicted RBP19.36■□□□□ 0.69
NID1-202ENST00000366595 CABP2Q9NPB3 220 aa19.36■□□□□ 0.69
NID1-202ENST00000366595 BCAR3O75815 825 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 AIDAQ96BJ3 306 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 C8orf76Q96K31 380 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 PLVAPQ9BX97 442 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 TUBB4BP68371 445 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 KLHL10Q6JEL2 608 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 DDX46Q7L014 1031 aaKnown RBP19.35■□□□□ 0.69
NID1-202ENST00000366595 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
NID1-202ENST00000366595 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
NID1-202ENST00000366595 STMN4Q9H169 189 aaPredicted RBP19.35■□□□□ 0.69
NID1-202ENST00000366595 HMGB2P26583 209 aaKnown RBP19.34■□□□□ 0.69
NID1-202ENST00000366595 IKBKGQ9Y6K9 419 aa19.34■□□□□ 0.69
NID1-202ENST00000366595 AMPD3Q01432 767 aa19.34■□□□□ 0.69
NID1-202ENST00000366595 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
NID1-202ENST00000366595 FAM177BA6PVY3 158 aa19.34■□□□□ 0.69
NID1-202ENST00000366595 SEPT6Q14141 434 aa19.34■□□□□ 0.69
NID1-202ENST00000366595 CNNM3Q8NE01 707 aa19.33■□□□□ 0.69
NID1-202ENST00000366595 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.69
NID1-202ENST00000366595 CUX1P39880 1505 aa19.33■□□□□ 0.69
NID1-202ENST00000366595 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.69
NID1-202ENST00000366595 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.69
NID1-202ENST00000366595 TTC14Q96N46 770 aa19.33■□□□□ 0.68
NID1-202ENST00000366595 TMCO5BA8MYB1 307 aa19.33■□□□□ 0.68
NID1-202ENST00000366595 KIF4AO95239 1232 aa19.33■□□□□ 0.68
NID1-202ENST00000366595 ACTN2P35609 894 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 CEP135Q66GS9 1140 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 USP25Q9UHP3 1055 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 AKAP2Q9Y2D5 859 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 OPA1O60313 960 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 CCDC172P0C7W6 258 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 PPP1R14CQ8TAE6 165 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
NID1-202ENST00000366595 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.32■□□□□ 0.68
NID1-202ENST00000366595 STXBP4Q6ZWJ1 553 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 MACROD2A1Z1Q3 448 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 FERMT3Q86UX7 667 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 KLHL34Q8N239 644 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
NID1-202ENST00000366595 MTIF2P46199 727 aaKnown RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 CTCFLQ8NI51 663 aaPredicted RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 COMMD10Q9Y6G5 202 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms