RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 RSPH6AQ9H0K4 717 aa8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 KDRP35968 1356 aa8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 PHF14O94880 888 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 PRKAR2BP31323 418 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 SLC27A3Q5K4L6 730 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 EYA1Q99502 592 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 NCAPD2Q15021 1401 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 MEGF6O75095 1541 aa8.93□□□□□ -0.98
RNU1-55P-201ENST00000365510 ZBED9Q6R2W3 1325 aa8.92□□□□□ -0.98
RNU1-55P-201ENST00000365510 CYP27B1O15528 508 aa8.92□□□□□ -0.98
RNU1-55P-201ENST00000365510 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
RNU1-55P-201ENST00000365510 NGEFQ8N5V2 710 aa8.92□□□□□ -0.98
RNU1-55P-201ENST00000365510 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
RNU1-55P-201ENST00000365510 APAF1O14727 1248 aa8.91□□□□□ -0.98
RNU1-55P-201ENST00000365510 PLEKHF1Q96S99 279 aa8.91□□□□□ -0.98
RNU1-55P-201ENST00000365510 MAP3K5Q99683 1374 aa8.9□□□□□ -0.98
RNU1-55P-201ENST00000365510 PIGBQ92521 554 aa8.9□□□□□ -0.98
RNU1-55P-201ENST00000365510 DOT1LQ8TEK3 1739 aa8.9□□□□□ -0.98
RNU1-55P-201ENST00000365510 SHANK3Q9BYB0 1731 aa8.9□□□□□ -0.98
RNU1-55P-201ENST00000365510 ATP10DQ9P241 1426 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 TATP17735 454 aaPredicted RBP8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 LMOD3Q0VAK6 560 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 ITPK1Q13572 414 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 NCBP3Q53F19 620 aaKnown RBP8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 LINC00116Q8NCU8 138 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 GAS2L2Q8NHY3 880 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 RAPGEF4Q8WZA2 1011 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 ASAP1Q9ULH1 1129 aa8.89□□□□□ -0.99
RNU1-55P-201ENST00000365510 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
RNU1-55P-201ENST00000365510 TMPOP42166 694 aaKnown RBP8.88□□□□□ -0.99
RNU1-55P-201ENST00000365510 NFE2L2Q16236 605 aa8.88□□□□□ -0.99
RNU1-55P-201ENST00000365510 LY75O60449 1722 aa8.88□□□□□ -0.99
RNU1-55P-201ENST00000365510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 A0A0G2JLW4 131 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 CENPBP07199 599 aaPredicted RBP8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 HTRA3P83110 453 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 AMOTQ4VCS5 1084 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 RRP7AQ9Y3A4 280 aaKnown RBP8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
RNU1-55P-201ENST00000365510 PALLDQ8WX93 1383 aa8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 RIPK4P57078 832 aa8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
RNU1-55P-201ENST00000365510 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 KIF3CO14782 793 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 CALD1Q05682 793 aaKnown RBP8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 MTHFSDQ2M296 383 aaKnown RBP8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 C1orf141Q5JVX7 400 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 RTF1Q92541 710 aaKnown RBP8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 AK7Q96M32 723 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
RNU1-55P-201ENST00000365510 ZNF521Q96K83 1311 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 PCDH11XQ9BZA7 1347 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 PCDH11YQ9BZA8 1340 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 LOC102724428A0A0B4J2F2 783 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 SIK1P57059 783 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 ZNF530Q6P9A1 599 aaPredicted RBP8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
RNU1-55P-201ENST00000365510 QSER1Q2KHR3 1735 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 ITGB4P16144 1822 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 GNPATO15228 680 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
RNU1-55P-201ENST00000365510 MMP10P09238 476 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 HSPA6P17066 643 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 GOLGA2Q08379 1002 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 AKAP4Q5JQC9 854 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 ARHGAP27Q6ZUM4 889 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 WDR63Q8IWG1 891 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 RBM42Q9BTD8 480 aaKnown RBP8.83□□□□□ -1
RNU1-55P-201ENST00000365510 NMRK2Q9NPI5 230 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
RNU1-55P-201ENST00000365510 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 E9PSI1 815 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
RNU1-55P-201ENST00000365510 DPEP1P16444 411 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 TRIM35Q9UPQ4 493 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 BCS1LQ9Y276 419 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
RNU1-55P-201ENST00000365510 IL16Q14005 1332 aa8.81□□□□□ -1
RNU1-55P-201ENST00000365510 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
RNU1-55P-201ENST00000365510 IFNL2Q8IZJ0 200 aa8.81□□□□□ -1
RNU1-55P-201ENST00000365510 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
RNU1-55P-201ENST00000365510 MYH16Q9H6N6 1097 aa8.81□□□□□ -1
RNU1-55P-201ENST00000365510 TMOD3Q9NYL9 352 aa8.81□□□□□ -1
RNU1-55P-201ENST00000365510 SRP68Q9UHB9 627 aaKnown RBP8.81□□□□□ -1
RNU1-55P-201ENST00000365510 C5P01031 1676 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms