RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 CHL1O00533 1208 aa14.06□□□□□ -0.16
SNX6-201ENST00000362031 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
SNX6-201ENST00000362031 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
SNX6-201ENST00000362031 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
SNX6-201ENST00000362031 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
SNX6-201ENST00000362031 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
SNX6-201ENST00000362031 FANCIQ9NVI1 1328 aa14.06□□□□□ -0.16
SNX6-201ENST00000362031 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SNX6-201ENST00000362031 TAF7Q15545 349 aaPredicted RBP14.05□□□□□ -0.16
SNX6-201ENST00000362031 KRT27Q7Z3Y8 459 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 PIGBQ92521 554 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 MRC1P22897 1456 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 TEFQ10587 303 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 DOT1LQ8TEK3 1739 aa14.05□□□□□ -0.16
SNX6-201ENST00000362031 IL16Q14005 1332 aa14.04□□□□□ -0.16
SNX6-201ENST00000362031 ITGB4P16144 1822 aa14.04□□□□□ -0.16
SNX6-201ENST00000362031 CABP4P57796 275 aa14.04□□□□□ -0.16
SNX6-201ENST00000362031 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
SNX6-201ENST00000362031 E9PSI1 815 aa14.03□□□□□ -0.16
SNX6-201ENST00000362031 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
SNX6-201ENST00000362031 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
SNX6-201ENST00000362031 BTBD11A6QL63 1104 aa14.02□□□□□ -0.16
SNX6-201ENST00000362031 GNAI1P63096 354 aa14.02□□□□□ -0.16
SNX6-201ENST00000362031 TSPYL6Q8N831 410 aa14.02□□□□□ -0.16
SNX6-201ENST00000362031 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.16
SNX6-201ENST00000362031 BCL9O00512 1426 aa14.02□□□□□ -0.17
SNX6-201ENST00000362031 C8orf58Q8NAV2 365 aa14.02□□□□□ -0.17
SNX6-201ENST00000362031 ELL2O00472 640 aaPredicted RBP14.01□□□□□ -0.17
SNX6-201ENST00000362031 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
SNX6-201ENST00000362031 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
SNX6-201ENST00000362031 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
SNX6-201ENST00000362031 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SNX6-201ENST00000362031 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
SNX6-201ENST00000362031 SBF2Q86WG5 1849 aa14□□□□□ -0.17
SNX6-201ENST00000362031 ZNF790Q6PG37 636 aa14□□□□□ -0.17
SNX6-201ENST00000362031 ATG3Q9NT62 314 aa14□□□□□ -0.17
SNX6-201ENST00000362031 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
SNX6-201ENST00000362031 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
SNX6-201ENST00000362031 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
SNX6-201ENST00000362031 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
SNX6-201ENST00000362031 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
SNX6-201ENST00000362031 TRIM37O94972 964 aa13.97□□□□□ -0.17
SNX6-201ENST00000362031 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
SNX6-201ENST00000362031 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
SNX6-201ENST00000362031 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
SNX6-201ENST00000362031 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
SNX6-201ENST00000362031 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.17
SNX6-201ENST00000362031 NHSQ6T4R5 1651 aa13.96□□□□□ -0.18
SNX6-201ENST00000362031 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
SNX6-201ENST00000362031 VAMP4O75379 141 aa13.95□□□□□ -0.18
SNX6-201ENST00000362031 KCNQ4P56696 695 aa13.95□□□□□ -0.18
SNX6-201ENST00000362031 BTAF1O14981 1849 aa13.95□□□□□ -0.18
SNX6-201ENST00000362031 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
SNX6-201ENST00000362031 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
SNX6-201ENST00000362031 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
SNX6-201ENST00000362031 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
SNX6-201ENST00000362031 NECTIN2Q92692 538 aa13.93□□□□□ -0.18
SNX6-201ENST00000362031 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
SNX6-201ENST00000362031 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
SNX6-201ENST00000362031 BCL2L13Q9BXK5 485 aa13.93□□□□□ -0.18
SNX6-201ENST00000362031 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
SNX6-201ENST00000362031 C5P01031 1676 aa13.92□□□□□ -0.18
SNX6-201ENST00000362031 PALLDQ8WX93 1383 aa13.92□□□□□ -0.18
SNX6-201ENST00000362031 BCAR3O75815 825 aa13.91□□□□□ -0.18
SNX6-201ENST00000362031 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
SNX6-201ENST00000362031 EIF2S2P20042 333 aaKnown RBP13.9□□□□□ -0.18
SNX6-201ENST00000362031 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
SNX6-201ENST00000362031 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
SNX6-201ENST00000362031 ITPK1Q13572 414 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 LOC102724428A0A0B4J2F2 783 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 ANXA1P04083 346 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 SIK1P57059 783 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 PROM2Q8N271 834 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
SNX6-201ENST00000362031 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
SNX6-201ENST00000362031 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
SNX6-201ENST00000362031 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
SNX6-201ENST00000362031 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
SNX6-201ENST00000362031 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
SNX6-201ENST00000362031 PDIA6Q15084 440 aa13.88□□□□□ -0.19
SNX6-201ENST00000362031 TNS1Q9HBL0 1735 aaKnown RBP13.87□□□□□ -0.19
SNX6-201ENST00000362031 APBA3O96018 575 aa13.87□□□□□ -0.19
SNX6-201ENST00000362031 A1BGP04217 495 aa13.87□□□□□ -0.19
SNX6-201ENST00000362031 ATP6V1AP38606 617 aa13.87□□□□□ -0.19
SNX6-201ENST00000362031 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
SNX6-201ENST00000362031 TJP1Q07157 1748 aa13.87□□□□□ -0.19
SNX6-201ENST00000362031 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
SNX6-201ENST00000362031 G2E3Q7L622 706 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
SNX6-201ENST00000362031 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 PLIN1O60240 522 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
SNX6-201ENST00000362031 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms