RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 YY1P25490 414 aa26.92■■□□□ 1.9
SHISA4-201ENST00000362011 ZCRB1Q8TBF4 217 aaKnown RBP26.92■■□□□ 1.9
SHISA4-201ENST00000362011 PPP1R1BQ9UD71 204 aaPredicted RBP26.92■■□□□ 1.9
SHISA4-201ENST00000362011 E9PSI1 815 aa26.91■■□□□ 1.9
SHISA4-201ENST00000362011 SLFN5Q08AF3 891 aa26.91■■□□□ 1.9
SHISA4-201ENST00000362011 DCTN1Q14203 1278 aa26.91■■□□□ 1.9
SHISA4-201ENST00000362011 PCDH11XQ9BZA7 1347 aa26.91■■□□□ 1.9
SHISA4-201ENST00000362011 PCDH11YQ9BZA8 1340 aa26.91■■□□□ 1.9
SHISA4-201ENST00000362011 MCM10Q7L590 875 aa26.9■■□□□ 1.9
SHISA4-201ENST00000362011 TNS2Q63HR2 1409 aa26.9■■□□□ 1.9
SHISA4-201ENST00000362011 IFNL2Q8IZJ0 200 aa26.9■■□□□ 1.9
SHISA4-201ENST00000362011 THUMPD2Q9BTF0 503 aaKnown RBP26.9■■□□□ 1.9
SHISA4-201ENST00000362011 PHKG2P15735 406 aa26.89■■□□□ 1.89
SHISA4-201ENST00000362011 PDGFDQ9GZP0 370 aaPredicted RBP26.89■■□□□ 1.89
SHISA4-201ENST00000362011 EXOC5O00471 708 aa26.88■■□□□ 1.89
SHISA4-201ENST00000362011 SPINK5Q9NQ38 1064 aaPredicted RBP26.88■■□□□ 1.89
SHISA4-201ENST00000362011 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
SHISA4-201ENST00000362011 ITGB4P16144 1822 aa26.87■■□□□ 1.89
SHISA4-201ENST00000362011 TXNRD1Q16881 649 aa26.87■■□□□ 1.89
SHISA4-201ENST00000362011 TRMT2AQ8IZ69 625 aaKnown RBP26.87■■□□□ 1.89
SHISA4-201ENST00000362011 CYP27B1O15528 508 aa26.86■■□□□ 1.89
SHISA4-201ENST00000362011 DUSP27Q5VZP5 1158 aa26.86■■□□□ 1.89
SHISA4-201ENST00000362011 MYH16Q9H6N6 1097 aa26.86■■□□□ 1.89
SHISA4-201ENST00000362011 TOGARAM1Q9Y4F4 1720 aa26.86■■□□□ 1.89
SHISA4-201ENST00000362011 KAT6BQ8WYB5 2073 aa26.85■■□□□ 1.89
SHISA4-201ENST00000362011 CEMIPQ8WUJ3 1361 aa26.85■■□□□ 1.89
SHISA4-201ENST00000362011 HSP90AB1P08238 724 aaKnown RBP26.85■■□□□ 1.89
SHISA4-201ENST00000362011 PTGER2P43116 358 aa26.85■■□□□ 1.89
SHISA4-201ENST00000362011 GNAI1P63096 354 aa26.85■■□□□ 1.89
SHISA4-201ENST00000362011 IL17REQ8NFR9 667 aa26.85■■□□□ 1.89
SHISA4-201ENST00000362011 RNMTO43148 476 aaKnown RBP26.84■■□□□ 1.89
SHISA4-201ENST00000362011 IFT57Q9NWB7 429 aa26.84■■□□□ 1.89
SHISA4-201ENST00000362011 KDM6AO15550 1401 aaPredicted RBP26.84■■□□□ 1.89
SHISA4-201ENST00000362011 MPRIPQ6WCQ1 1025 aa26.83■■□□□ 1.89
SHISA4-201ENST00000362011 LAS1LQ9Y4W2 734 aaKnown RBP26.83■■□□□ 1.89
SHISA4-201ENST00000362011 DOT1LQ8TEK3 1739 aa26.82■■□□□ 1.88
SHISA4-201ENST00000362011 SLC15A2Q16348 729 aa26.82■■□□□ 1.88
SHISA4-201ENST00000362011 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
SHISA4-201ENST00000362011 CFAP44Q96MT7 982 aa26.81■■□□□ 1.88
SHISA4-201ENST00000362011 MRC1P22897 1456 aa26.81■■□□□ 1.88
SHISA4-201ENST00000362011 NHSQ6T4R5 1651 aa26.81■■□□□ 1.88
SHISA4-201ENST00000362011 DCAF8L1A6NGE4 600 aa26.8■■□□□ 1.88
SHISA4-201ENST00000362011 ZBTB7AO95365 584 aa26.8■■□□□ 1.88
SHISA4-201ENST00000362011 ZNF853P0CG23 659 aa26.8■■□□□ 1.88
SHISA4-201ENST00000362011 DDX54Q8TDD1 881 aaKnown RBP26.8■■□□□ 1.88
SHISA4-201ENST00000362011 DCAF5Q96JK2 942 aa26.8■■□□□ 1.88
SHISA4-201ENST00000362011 FANCIQ9NVI1 1328 aa26.8■■□□□ 1.88
SHISA4-201ENST00000362011 STK32BQ9NY57 414 aa26.79■■□□□ 1.88
SHISA4-201ENST00000362011 TEFQ10587 303 aa26.78■■□□□ 1.88
SHISA4-201ENST00000362011 SGIP1Q9BQI5 828 aa26.78■■□□□ 1.88
SHISA4-201ENST00000362011 NKX1-1Q15270 411 aaPredicted RBP26.77■■□□□ 1.88
SHISA4-201ENST00000362011 TSR2Q969E8 191 aaKnown RBP26.77■■□□□ 1.88
SHISA4-201ENST00000362011 PAPPAQ13219 1627 aa26.77■■□□□ 1.88
SHISA4-201ENST00000362011 TAF7Q15545 349 aaPredicted RBP26.76■■□□□ 1.87
SHISA4-201ENST00000362011 CHL1O00533 1208 aa26.75■■□□□ 1.87
SHISA4-201ENST00000362011 MBIPQ9NS73 344 aa26.75■■□□□ 1.87
SHISA4-201ENST00000362011 BABAM1Q9NWV8 329 aa26.75■■□□□ 1.87
SHISA4-201ENST00000362011 MTFR1LQ9H019 292 aa26.74■■□□□ 1.87
SHISA4-201ENST00000362011 ATF5Q9Y2D1 282 aaPredicted RBP26.74■■□□□ 1.87
SHISA4-201ENST00000362011 TSPYL4Q9UJ04 414 aa26.73■■□□□ 1.87
SHISA4-201ENST00000362011 SYT17Q9BSW7 474 aa26.71■■□□□ 1.87
SHISA4-201ENST00000362011 SLC52A2Q9HAB3 445 aa26.71■■□□□ 1.87
SHISA4-201ENST00000362011 UBR2Q8IWV8 1755 aa26.71■■□□□ 1.87
SHISA4-201ENST00000362011 ERVV-2B6SEH9 535 aa26.7■■□□□ 1.87
SHISA4-201ENST00000362011 CACNA1FO60840 1977 aa26.69■■□□□ 1.86
SHISA4-201ENST00000362011 EXOSC9Q06265 439 aaKnown RBP26.69■■□□□ 1.86
SHISA4-201ENST00000362011 ACSBG1Q96GR2 724 aa26.69■■□□□ 1.86
SHISA4-201ENST00000362011 FHDC1Q9C0D6 1143 aaPredicted RBP26.69■■□□□ 1.86
SHISA4-201ENST00000362011 CABP4P57796 275 aa26.68■■□□□ 1.86
SHISA4-201ENST00000362011 MIS18AQ9NYP9 233 aa26.68■■□□□ 1.86
SHISA4-201ENST00000362011 BTBD11A6QL63 1104 aa26.67■■□□□ 1.86
SHISA4-201ENST00000362011 BTAF1O14981 1849 aa26.67■■□□□ 1.86
SHISA4-201ENST00000362011 CT47B1P0C2W7 299 aaPredicted RBP26.66■■□□□ 1.86
SHISA4-201ENST00000362011 UTRNP46939 3433 aa26.65■■□□□ 1.86
SHISA4-201ENST00000362011 NFATC2IPQ8NCF5 419 aa26.65■■□□□ 1.86
SHISA4-201ENST00000362011 RCAN3Q9UKA8 241 aa26.65■■□□□ 1.86
SHISA4-201ENST00000362011 LRRC4BQ9NT99 713 aa26.65■■□□□ 1.86
SHISA4-201ENST00000362011 C5P01031 1676 aa26.63■■□□□ 1.85
SHISA4-201ENST00000362011 LAMB4A4D0S4 1761 aa26.63■■□□□ 1.85
SHISA4-201ENST00000362011 ZNF827Q17R98 1081 aa26.63■■□□□ 1.85
SHISA4-201ENST00000362011 ZNF784Q8NCA9 323 aaPredicted RBP26.61■■□□□ 1.85
SHISA4-201ENST00000362011 AKT1S1Q96B36 256 aa26.61■■□□□ 1.85
SHISA4-201ENST00000362011 ARXQ96QS3 562 aa26.61■■□□□ 1.85
SHISA4-201ENST00000362011 TMOD3Q9NYL9 352 aa26.61■■□□□ 1.85
SHISA4-201ENST00000362011 TWISTNBQ3B726 338 aaPredicted RBP26.6■■□□□ 1.85
SHISA4-201ENST00000362011 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
SHISA4-201ENST00000362011 QSER1Q2KHR3 1735 aa26.59■■□□□ 1.85
SHISA4-201ENST00000362011 COL24A1Q17RW2 1714 aa26.58■■□□□ 1.85
SHISA4-201ENST00000362011 KCNQ3O43525 872 aa26.58■■□□□ 1.85
SHISA4-201ENST00000362011 SLC27A3Q5K4L6 730 aa26.58■■□□□ 1.85
SHISA4-201ENST00000362011 TSPYL6Q8N831 410 aa26.58■■□□□ 1.85
SHISA4-201ENST00000362011 EIF4A1P60842 406 aaKnown RBP26.57■■□□□ 1.84
SHISA4-201ENST00000362011 KRT24Q2M2I5 525 aa26.57■■□□□ 1.84
SHISA4-201ENST00000362011 ZNF790Q6PG37 636 aa26.57■■□□□ 1.84
SHISA4-201ENST00000362011 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
SHISA4-201ENST00000362011 SUPT16HQ9Y5B9 1047 aaKnown RBP26.57■■□□□ 1.84
SHISA4-201ENST00000362011 SOS1Q07889 1333 aaPredicted RBP26.57■■□□□ 1.84
SHISA4-201ENST00000362011 ELL2O00472 640 aaPredicted RBP26.56■■□□□ 1.84
SHISA4-201ENST00000362011 VAMP4O75379 141 aa26.56■■□□□ 1.84
SHISA4-201ENST00000362011 SLC39A6Q13433 755 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms