RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
CLK2-202ENST00000361168 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.35
CLK2-202ENST00000361168 MRC1P22897 1456 aa23.49■■□□□ 1.35
CLK2-202ENST00000361168 APBA3O96018 575 aa23.48■■□□□ 1.35
CLK2-202ENST00000361168 DEFB132Q7Z7B7 95 aa23.48■■□□□ 1.35
CLK2-202ENST00000361168 ATG3Q9NT62 314 aa23.48■■□□□ 1.35
CLK2-202ENST00000361168 KCNQ4P56696 695 aa23.47■■□□□ 1.35
CLK2-202ENST00000361168 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
CLK2-202ENST00000361168 BTAF1O14981 1849 aa23.47■■□□□ 1.35
CLK2-202ENST00000361168 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
CLK2-202ENST00000361168 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
CLK2-202ENST00000361168 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
CLK2-202ENST00000361168 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.35
CLK2-202ENST00000361168 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.35
CLK2-202ENST00000361168 ZNF521Q96K83 1311 aa23.45■■□□□ 1.34
CLK2-202ENST00000361168 BTBD11A6QL63 1104 aa23.45■■□□□ 1.34
CLK2-202ENST00000361168 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
CLK2-202ENST00000361168 SIPA1L3O60292 1781 aaPredicted RBP23.44■■□□□ 1.34
CLK2-202ENST00000361168 EN1Q05925 392 aaPredicted RBP23.44■■□□□ 1.34
CLK2-202ENST00000361168 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
CLK2-202ENST00000361168 PROM2Q8N271 834 aa23.43■■□□□ 1.34
CLK2-202ENST00000361168 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
CLK2-202ENST00000361168 ZNF790Q6PG37 636 aa23.41■■□□□ 1.34
CLK2-202ENST00000361168 PALLDQ8WX93 1383 aa23.41■■□□□ 1.34
CLK2-202ENST00000361168 CDCA7LQ96GN5 454 aa23.41■■□□□ 1.34
CLK2-202ENST00000361168 SRCAPQ6ZRS2 3230 aa23.4■■□□□ 1.34
CLK2-202ENST00000361168 EZH2Q15910 746 aaKnown RBP23.4■■□□□ 1.34
CLK2-202ENST00000361168 TSR2Q969E8 191 aaKnown RBP23.4■■□□□ 1.34
CLK2-202ENST00000361168 CHL1O00533 1208 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.33
CLK2-202ENST00000361168 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
CLK2-202ENST00000361168 CFAP44Q96MT7 982 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
CLK2-202ENST00000361168 SF3B2Q13435 895 aaKnown RBP23.38■■□□□ 1.33
CLK2-202ENST00000361168 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
CLK2-202ENST00000361168 PRAMEF22A3QJZ6 481 aa23.37■■□□□ 1.33
CLK2-202ENST00000361168 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
CLK2-202ENST00000361168 PLSCR1O15162 318 aa23.37■■□□□ 1.33
CLK2-202ENST00000361168 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
CLK2-202ENST00000361168 PAPPAQ13219 1627 aa23.36■■□□□ 1.33
CLK2-202ENST00000361168 KCPQ6ZWJ8 1503 aa23.36■■□□□ 1.33
CLK2-202ENST00000361168 LOC102724428A0A0B4J2F2 783 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 SIK1P57059 783 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 IFT57Q9NWB7 429 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 TXNRD1Q16881 649 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 TTC5Q8N0Z6 440 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
CLK2-202ENST00000361168 ITPK1Q13572 414 aa23.34■■□□□ 1.33
CLK2-202ENST00000361168 BAG6P46379 1132 aa23.33■■□□□ 1.33
CLK2-202ENST00000361168 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.33
CLK2-202ENST00000361168 GNAI1P63096 354 aa23.33■■□□□ 1.32
CLK2-202ENST00000361168 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.32
CLK2-202ENST00000361168 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
CLK2-202ENST00000361168 GOLGA2Q08379 1002 aa23.32■■□□□ 1.32
CLK2-202ENST00000361168 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
CLK2-202ENST00000361168 ATP6V1AP38606 617 aa23.31■■□□□ 1.32
CLK2-202ENST00000361168 CALD1Q05682 793 aaKnown RBP23.31■■□□□ 1.32
CLK2-202ENST00000361168 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
CLK2-202ENST00000361168 IL16Q14005 1332 aa23.31■■□□□ 1.32
CLK2-202ENST00000361168 UBR2Q8IWV8 1755 aa23.31■■□□□ 1.32
CLK2-202ENST00000361168 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
CLK2-202ENST00000361168 LY75O60449 1722 aa23.3■■□□□ 1.32
CLK2-202ENST00000361168 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
CLK2-202ENST00000361168 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
CLK2-202ENST00000361168 FMNL2Q96PY5 1086 aa23.29■■□□□ 1.32
CLK2-202ENST00000361168 HEG1Q9ULI3 1381 aa23.29■■□□□ 1.32
CLK2-202ENST00000361168 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
CLK2-202ENST00000361168 C8orf58Q8NAV2 365 aa23.29■■□□□ 1.32
CLK2-202ENST00000361168 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
CLK2-202ENST00000361168 LINC00116Q8NCU8 138 aa23.28■■□□□ 1.32
CLK2-202ENST00000361168 USP16Q9Y5T5 823 aa23.28■■□□□ 1.32
CLK2-202ENST00000361168 SOCS7O14512 581 aa23.27■■□□□ 1.32
CLK2-202ENST00000361168 SMIM5Q71RC9 77 aa23.27■■□□□ 1.32
CLK2-202ENST00000361168 BABAM1Q9NWV8 329 aa23.27■■□□□ 1.32
CLK2-202ENST00000361168 GIGYF1O75420 1035 aaPredicted RBP23.27■■□□□ 1.32
CLK2-202ENST00000361168 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
CLK2-202ENST00000361168 AMIGO3Q86WK7 504 aa23.25■■□□□ 1.31
CLK2-202ENST00000361168 E9PSI1 815 aa23.24■■□□□ 1.31
CLK2-202ENST00000361168 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
CLK2-202ENST00000361168 SLC27A3Q5K4L6 730 aa23.24■■□□□ 1.31
CLK2-202ENST00000361168 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
CLK2-202ENST00000361168 TRMT2AQ8IZ69 625 aaKnown RBP23.24■■□□□ 1.31
CLK2-202ENST00000361168 NECTIN2Q92692 538 aa23.24■■□□□ 1.31
CLK2-202ENST00000361168 ANO8Q9HCE9 1232 aaPredicted RBP23.24■■□□□ 1.31
CLK2-202ENST00000361168 TJP1Q07157 1748 aa23.23■■□□□ 1.31
CLK2-202ENST00000361168 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
CLK2-202ENST00000361168 C5P01031 1676 aa23.23■■□□□ 1.31
CLK2-202ENST00000361168 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
CLK2-202ENST00000361168 ZNF827Q17R98 1081 aa23.22■■□□□ 1.31
CLK2-202ENST00000361168 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
CLK2-202ENST00000361168 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
CLK2-202ENST00000361168 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
CLK2-202ENST00000361168 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
CLK2-202ENST00000361168 EIF2S2P20042 333 aaKnown RBP23.21■■□□□ 1.31
CLK2-202ENST00000361168 A1BGP04217 495 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms