RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 METTL24Q5JXM2 366 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-201ENST00000358694 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 ZNF444Q8N0Y2 327 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-201ENST00000358694 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 FGFR1OPO95684 399 aaKnown RBP10.32□□□□□ -0.76
CTNND1-201ENST00000358694 SPECC1Q5M775 1068 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 VPS8Q8N3P4 1428 aa10.32□□□□□ -0.76
CTNND1-201ENST00000358694 ACTN2P35609 894 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 TDRD12Q587J7 1177 aaKnown RBP10.31□□□□□ -0.76
CTNND1-201ENST00000358694 CWC27Q6UX04 472 aaKnown RBP10.31□□□□□ -0.76
CTNND1-201ENST00000358694 UBXN4Q92575 508 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 MPHOSPH6Q99547 160 aaKnown RBP10.31□□□□□ -0.76
CTNND1-201ENST00000358694 NDC80O14777 642 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 STARD3NLO95772 234 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 RNF187Q5TA31 235 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-201ENST00000358694 OTUD6BQ8N6M0 293 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
CTNND1-201ENST00000358694 KIF20AO95235 890 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 TIGD1Q96MW7 591 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
CTNND1-201ENST00000358694 SLU7O95391 586 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 CCDC175P0C221 793 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 EXOSC9Q06265 439 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 KRT32Q14532 448 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 IKBKGQ9Y6K9 419 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 PRC1O43663 620 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 MAP9Q49MG5 647 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 C6orf163Q5TEZ5 329 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 ZMYND15Q9H091 742 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 NOB1Q9ULX3 412 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 KIF5CO60282 957 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 PRPF4BQ13523 1007 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 PPP6R1Q9UPN7 881 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 CASQ1P31415 396 aa10.3□□□□□ -0.76
CTNND1-201ENST00000358694 SREK1Q8WXA9 508 aaKnown RBP10.3□□□□□ -0.76
CTNND1-201ENST00000358694 USO1O60763 962 aaKnown RBP10.29□□□□□ -0.76
CTNND1-201ENST00000358694 PAFAH1B1P43034 410 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 BICD1Q96G01 975 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 SH3BP5O60239 455 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 SULT6B1Q6IMI4 303 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 SYCP3Q8IZU3 236 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
CTNND1-201ENST00000358694 RANBP6O60518 1105 aaKnown RBP10.29□□□□□ -0.76
CTNND1-201ENST00000358694 IFIT1P09914 478 aaKnown RBP10.29□□□□□ -0.76
CTNND1-201ENST00000358694 SYNCQ9H7C4 482 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
CTNND1-201ENST00000358694 KIF4BQ2VIQ3 1234 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-201ENST00000358694 MCM3P25205 808 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 HLTFQ14527 1009 aaKnown RBP eCLIP10.28□□□□□ -0.765e-6■□□□□ 9.8
CTNND1-201ENST00000358694 TCP11L2Q8N4U5 519 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 PHAXQ9H814 394 aaKnown RBP10.28□□□□□ -0.76
CTNND1-201ENST00000358694 ZSCAN12O43309 604 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 MAPK8IP2Q13387 824 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-201ENST00000358694 CAMK4Q16566 473 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 PTPRGP23470 1445 aa10.28□□□□□ -0.76
CTNND1-201ENST00000358694 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.76
CTNND1-201ENST00000358694 NAPBQ9H115 298 aa10.27□□□□□ -0.76
CTNND1-201ENST00000358694 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.76
CTNND1-201ENST00000358694 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.76
CTNND1-201ENST00000358694 STXBP4Q6ZWJ1 553 aa10.27□□□□□ -0.76
CTNND1-201ENST00000358694 MICALCLQ6ZW33 695 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC196A0A1B0GTZ2 297 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
CTNND1-201ENST00000358694 NLRP5P59047 1200 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 BCAR3O75815 825 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 UQCRHP07919 91 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 CABP5Q9NP86 173 aa10.27□□□□□ -0.77
CTNND1-201ENST00000358694 IQCA1Q86XH1 822 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 SFPQP23246 707 aaKnown RBP eCLIP10.26□□□□□ -0.771e-8■■■□□ 15.1
CTNND1-201ENST00000358694 PSMC4P43686 418 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 TAF12Q16514 161 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 ALS2CR12Q96Q35 445 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 IL1RAPL2Q9NP60 686 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 K7ELQ4 463 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 YEATS4O95619 227 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms