RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 LOC102724428A0A0B4J2F2 783 aa11.94□□□□□ -0.5
COL4A3BP-202ENST00000357457 SIK1P57059 783 aa11.94□□□□□ -0.5
COL4A3BP-202ENST00000357457 EYA1Q99502 592 aa11.94□□□□□ -0.5
COL4A3BP-202ENST00000357457 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
COL4A3BP-202ENST00000357457 NSD3Q9BZ95 1437 aa11.94□□□□□ -0.5
COL4A3BP-202ENST00000357457 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
COL4A3BP-202ENST00000357457 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
COL4A3BP-202ENST00000357457 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
COL4A3BP-202ENST00000357457 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
COL4A3BP-202ENST00000357457 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 ITPK1Q13572 414 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
COL4A3BP-202ENST00000357457 ABCB7O75027 752 aa11.91□□□□□ -0.5
COL4A3BP-202ENST00000357457 PHF14O94880 888 aa11.91□□□□□ -0.5
COL4A3BP-202ENST00000357457 PHKG2P15735 406 aa11.91□□□□□ -0.5
COL4A3BP-202ENST00000357457 POLA2Q14181 598 aa11.91□□□□□ -0.5
COL4A3BP-202ENST00000357457 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
COL4A3BP-202ENST00000357457 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
COL4A3BP-202ENST00000357457 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
COL4A3BP-202ENST00000357457 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
COL4A3BP-202ENST00000357457 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
COL4A3BP-202ENST00000357457 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
COL4A3BP-202ENST00000357457 GNPATO15228 680 aa11.89□□□□□ -0.51
COL4A3BP-202ENST00000357457 HSPA6P17066 643 aa11.89□□□□□ -0.51
COL4A3BP-202ENST00000357457 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 TGFB2P61812 414 aa11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
COL4A3BP-202ENST00000357457 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 KIF3CO14782 793 aa11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 MMP10P09238 476 aa11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
COL4A3BP-202ENST00000357457 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 POTEHQ6S545 545 aa11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 KDRP35968 1356 aa11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
COL4A3BP-202ENST00000357457 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
COL4A3BP-202ENST00000357457 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
COL4A3BP-202ENST00000357457 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
COL4A3BP-202ENST00000357457 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
COL4A3BP-202ENST00000357457 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
COL4A3BP-202ENST00000357457 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
COL4A3BP-202ENST00000357457 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
COL4A3BP-202ENST00000357457 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
COL4A3BP-202ENST00000357457 PCNTO95613 3336 aa11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 GYS1P13807 737 aa11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 PLEKHO1Q53GL0 409 aaPredicted RBP11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
COL4A3BP-202ENST00000357457 KCNA3P22001 575 aa11.82□□□□□ -0.52
COL4A3BP-202ENST00000357457 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
COL4A3BP-202ENST00000357457 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
COL4A3BP-202ENST00000357457 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
COL4A3BP-202ENST00000357457 C10orf71Q711Q0 1435 aa11.82□□□□□ -0.52
COL4A3BP-202ENST00000357457 TOMM70O94826 608 aa11.81□□□□□ -0.52
COL4A3BP-202ENST00000357457 DPEP1P16444 411 aa11.81□□□□□ -0.52
COL4A3BP-202ENST00000357457 RFC4P35249 363 aa11.81□□□□□ -0.52
COL4A3BP-202ENST00000357457 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
COL4A3BP-202ENST00000357457 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
COL4A3BP-202ENST00000357457 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 CABP4P57796 275 aa11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
COL4A3BP-202ENST00000357457 FCHSD2O94868 740 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 MTHFSP49914 203 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 APLP1P51693 650 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 PANK3Q9H999 370 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
COL4A3BP-202ENST00000357457 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
COL4A3BP-202ENST00000357457 SBF1O95248 1867 aa11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 PTCD1O75127 700 aaKnown RBP11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 TM4SF1P30408 202 aa11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
COL4A3BP-202ENST00000357457 FKBP8Q14318 412 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 INTS5Q6P9B9 1019 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms