RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
PTBP1-203ENST00000356948 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
PTBP1-203ENST00000356948 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
PTBP1-203ENST00000356948 PTPRCP08575 1304 aa18.75■□□□□ 0.59
PTBP1-203ENST00000356948 KCNQ3O43525 872 aa18.75■□□□□ 0.59
PTBP1-203ENST00000356948 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
PTBP1-203ENST00000356948 SIRT1Q96EB6 747 aa18.74■□□□□ 0.59
PTBP1-203ENST00000356948 CIZ1Q9ULV3 898 aaPredicted RBP18.74■□□□□ 0.59
PTBP1-203ENST00000356948 SETD1BQ9UPS6 1966 aaKnown RBP18.74■□□□□ 0.59
PTBP1-203ENST00000356948 RABEP1Q15276 862 aa18.74■□□□□ 0.59
PTBP1-203ENST00000356948 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
PTBP1-203ENST00000356948 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
PTBP1-203ENST00000356948 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
PTBP1-203ENST00000356948 NRKQ7Z2Y5 1582 aa18.73■□□□□ 0.59
PTBP1-203ENST00000356948 KCNA6P17658 529 aa18.73■□□□□ 0.59
PTBP1-203ENST00000356948 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
PTBP1-203ENST00000356948 SSH2Q76I76 1423 aa18.73■□□□□ 0.59
PTBP1-203ENST00000356948 NEK4P51957 841 aa18.73■□□□□ 0.59
PTBP1-203ENST00000356948 USP31Q70CQ4 1352 aa18.72■□□□□ 0.59
PTBP1-203ENST00000356948 PRPF40AO75400 957 aaKnown RBP18.72■□□□□ 0.59
PTBP1-203ENST00000356948 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
PTBP1-203ENST00000356948 LGR6Q9HBX8 967 aa18.72■□□□□ 0.59
PTBP1-203ENST00000356948 GNAI2P04899 355 aa18.71■□□□□ 0.59
PTBP1-203ENST00000356948 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
PTBP1-203ENST00000356948 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
PTBP1-203ENST00000356948 HOXC9P31274 260 aa18.71■□□□□ 0.59
PTBP1-203ENST00000356948 RBM10P98175 930 aaKnown RBP18.7■□□□□ 0.58
PTBP1-203ENST00000356948 XPCQ01831 940 aaPredicted RBP18.7■□□□□ 0.58
PTBP1-203ENST00000356948 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 USP44Q9H0E7 712 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 ERC2O15083 957 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 LMBRD1Q9NUN5 540 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 FLT4P35916 1363 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
PTBP1-203ENST00000356948 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
PTBP1-203ENST00000356948 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
PTBP1-203ENST00000356948 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
PTBP1-203ENST00000356948 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
PTBP1-203ENST00000356948 CYP2E1P05181 493 aaPredicted RBP18.68■□□□□ 0.58
PTBP1-203ENST00000356948 LRRC59Q96AG4 307 aaKnown RBP18.68■□□□□ 0.58
PTBP1-203ENST00000356948 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
PTBP1-203ENST00000356948 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
PTBP1-203ENST00000356948 MX1P20591 662 aa18.68■□□□□ 0.58
PTBP1-203ENST00000356948 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
PTBP1-203ENST00000356948 SBNO1A3KN83 1393 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
PTBP1-203ENST00000356948 EID1Q9Y6B2 187 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 TMX3Q96JJ7 454 aa18.67■□□□□ 0.58
PTBP1-203ENST00000356948 PRAMEF22A3QJZ6 481 aa18.66■□□□□ 0.58
PTBP1-203ENST00000356948 HMMRO75330 724 aa18.66■□□□□ 0.58
PTBP1-203ENST00000356948 KDRP35968 1356 aa18.66■□□□□ 0.58
PTBP1-203ENST00000356948 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
PTBP1-203ENST00000356948 ANP32BQ92688 251 aaKnown RBP18.65■□□□□ 0.58
PTBP1-203ENST00000356948 FAM13BQ9NYF5 915 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 ESPNB1AK53 854 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
PTBP1-203ENST00000356948 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 CASC1Q6TDU7 716 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
PTBP1-203ENST00000356948 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 CPA1P15085 419 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 CHMLP26374 656 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 ZSCAN23Q3MJ62 389 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
PTBP1-203ENST00000356948 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.58
PTBP1-203ENST00000356948 ST18O60284 1047 aa18.64■□□□□ 0.57
PTBP1-203ENST00000356948 ATP8B2P98198 1209 aa18.64■□□□□ 0.57
PTBP1-203ENST00000356948 REC8O95072 547 aa18.64■□□□□ 0.57
PTBP1-203ENST00000356948 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
PTBP1-203ENST00000356948 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
PTBP1-203ENST00000356948 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-203ENST00000356948 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
PTBP1-203ENST00000356948 CHPF2Q9P2E5 772 aa18.63■□□□□ 0.57
PTBP1-203ENST00000356948 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
PTBP1-203ENST00000356948 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
PTBP1-203ENST00000356948 PIK3C2AO00443 1686 aa18.63■□□□□ 0.57
PTBP1-203ENST00000356948 SOS1Q07889 1333 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-203ENST00000356948 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
PTBP1-203ENST00000356948 KIF13AQ9H1H9 1805 aa18.62■□□□□ 0.57
PTBP1-203ENST00000356948 OSBPL3Q9H4L5 887 aa18.62■□□□□ 0.57
PTBP1-203ENST00000356948 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
PTBP1-203ENST00000356948 CLCN1P35523 988 aa18.62■□□□□ 0.57
PTBP1-203ENST00000356948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-203ENST00000356948 RRP9O43818 475 aaKnown RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 COL9A3Q14050 684 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 MPNDQ8N594 471 aa18.61■□□□□ 0.57
PTBP1-203ENST00000356948 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
PTBP1-203ENST00000356948 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 SKOR2Q2VWA4 1001 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-203ENST00000356948 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
PTBP1-203ENST00000356948 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
PTBP1-203ENST00000356948 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
PTBP1-203ENST00000356948 IBTKQ9P2D0 1353 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms