RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 CNPY2Q9Y2B0 182 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 DTNBO60941 627 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 CUL4AQ13619 759 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 PPP4R3BQ5MIZ7 849 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 KIF3AQ9Y496 699 aa21.4■■□□□ 1.02
KDM1A-201ENST00000356634 WDR33Q9C0J8 1336 aaKnown RBP21.4■■□□□ 1.02
KDM1A-201ENST00000356634 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.02
KDM1A-201ENST00000356634 FIBPO43427 364 aa21.39■■□□□ 1.01
KDM1A-201ENST00000356634 FAM184AQ8NB25 1140 aa21.39■■□□□ 1.01
KDM1A-201ENST00000356634 ZNF710Q8N1W2 664 aa21.39■■□□□ 1.01
KDM1A-201ENST00000356634 COG3Q96JB2 828 aa21.39■■□□□ 1.01
KDM1A-201ENST00000356634 PODXL2Q9NZ53 605 aa21.39■■□□□ 1.01
KDM1A-201ENST00000356634 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 PTPRMP28827 1452 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 PLEKHG5O94827 1062 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 MX1P20591 662 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 SPC24Q8NBT2 197 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 INTS4Q96HW7 963 aaKnown RBP21.38■■□□□ 1.01
KDM1A-201ENST00000356634 SRCIN1Q9C0H9 1055 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
KDM1A-201ENST00000356634 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
KDM1A-201ENST00000356634 CCDC183Q5T5S1 534 aa21.37■■□□□ 1.01
KDM1A-201ENST00000356634 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
KDM1A-201ENST00000356634 SPDYE4A6NLX3 237 aa21.37■■□□□ 1.01
KDM1A-201ENST00000356634 G2E3Q7L622 706 aa21.37■■□□□ 1.01
KDM1A-201ENST00000356634 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
KDM1A-201ENST00000356634 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
KDM1A-201ENST00000356634 CHMLP26374 656 aa21.36■■□□□ 1.01
KDM1A-201ENST00000356634 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
KDM1A-201ENST00000356634 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
KDM1A-201ENST00000356634 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
KDM1A-201ENST00000356634 PTPRCP08575 1304 aa21.35■■□□□ 1.01
KDM1A-201ENST00000356634 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
KDM1A-201ENST00000356634 CHAF1AQ13111 956 aaPredicted RBP21.34■■□□□ 1.01
KDM1A-201ENST00000356634 UVSSAQ2YD98 709 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 NECTIN2Q92692 538 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 RGS12O14924 1447 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 OSBPL3Q9H4L5 887 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 GNAI2P04899 355 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 ZSCAN20P17040 1043 aaPredicted RBP21.34■■□□□ 1.01
KDM1A-201ENST00000356634 DMTNQ08495 405 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
KDM1A-201ENST00000356634 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1.01
KDM1A-201ENST00000356634 TCHHQ07283 1943 aa21.33■■□□□ 1.01
KDM1A-201ENST00000356634 HECW2Q9P2P5 1572 aa21.33■■□□□ 1
KDM1A-201ENST00000356634 BCL2L12Q9HB09 334 aa21.33■■□□□ 1
KDM1A-201ENST00000356634 ATP2B3Q16720 1220 aa21.32■■□□□ 1
KDM1A-201ENST00000356634 CHMP3Q9Y3E7 222 aa21.32■■□□□ 1
KDM1A-201ENST00000356634 KIF20BQ96Q89 1820 aa21.32■■□□□ 1
KDM1A-201ENST00000356634 ANAPC15P60006 121 aa21.32■■□□□ 1
KDM1A-201ENST00000356634 CHL1O00533 1208 aa21.31■■□□□ 1
KDM1A-201ENST00000356634 KDM4AO75164 1064 aa21.31■■□□□ 1
KDM1A-201ENST00000356634 PDCL2Q8N4E4 241 aa21.31■■□□□ 1
KDM1A-201ENST00000356634 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
KDM1A-201ENST00000356634 FKBP5Q13451 457 aaPredicted RBP21.31■■□□□ 1
KDM1A-201ENST00000356634 IGSF3O75054 1194 aa21.3■■□□□ 1
KDM1A-201ENST00000356634 IL25Q9H293 177 aa21.3■■□□□ 1
KDM1A-201ENST00000356634 DLG5Q8TDM6 1919 aa21.3■■□□□ 1
KDM1A-201ENST00000356634 CCT4P50991 539 aaKnown RBP21.29■■□□□ 1
KDM1A-201ENST00000356634 ESF1Q9H501 851 aaKnown RBP21.29■■□□□ 1
KDM1A-201ENST00000356634 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
KDM1A-201ENST00000356634 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
KDM1A-201ENST00000356634 ZSCAN22P10073 491 aaPredicted RBP21.29■■□□□ 1
KDM1A-201ENST00000356634 UBE2HP62256 183 aa21.29■■□□□ 1
KDM1A-201ENST00000356634 PYCARDQ9ULZ3 195 aa21.29■■□□□ 1
KDM1A-201ENST00000356634 SMC3Q9UQE7 1217 aa21.28■■□□□ 1
KDM1A-201ENST00000356634 STX6O43752 255 aa21.28■■□□□ 1
KDM1A-201ENST00000356634 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
KDM1A-201ENST00000356634 RIOK3O14730 519 aaKnown RBP21.27■■□□□ 1
KDM1A-201ENST00000356634 LETM1O95202 739 aaPredicted RBP21.27■■□□□ 1
KDM1A-201ENST00000356634 SYT1P21579 422 aa21.27■■□□□ 1
KDM1A-201ENST00000356634 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
KDM1A-201ENST00000356634 STK31Q9BXU1 1019 aa21.27■■□□□ 1
KDM1A-201ENST00000356634 CPA1P15085 419 aa21.26■□□□□ 0.99
KDM1A-201ENST00000356634 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
KDM1A-201ENST00000356634 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
KDM1A-201ENST00000356634 U2AF2P26368 475 aaKnown RBP eCLIP21.26■□□□□ 0.998e-7■■□□□ 14.1
KDM1A-201ENST00000356634 TSPOAP1O95153 1857 aa21.26■□□□□ 0.99
KDM1A-201ENST00000356634 GTF2F1P35269 517 aaKnown RBP eCLIP21.26■□□□□ 0.994e-12■■■■■ 26.8
KDM1A-201ENST00000356634 CPSF1Q10570 1443 aaKnown RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 UTP14CQ5TAP6 766 aaKnown RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 RTF1Q92541 710 aaKnown RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 RPAP1Q9BWH6 1393 aaPredicted RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 CDK12Q9NYV4 1490 aaPredicted RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 VPS37CA5D8V6 355 aaPredicted RBP21.25■□□□□ 0.99
KDM1A-201ENST00000356634 FOXO3O43524 673 aa21.25■□□□□ 0.99
KDM1A-201ENST00000356634 AK2P54819 239 aa21.25■□□□□ 0.99
KDM1A-201ENST00000356634 SPTLC3Q9NUV7 552 aa21.25■□□□□ 0.99
KDM1A-201ENST00000356634 PIK3C2BO00750 1634 aa21.24■□□□□ 0.99
KDM1A-201ENST00000356634 DNM1Q05193 864 aaKnown RBP21.24■□□□□ 0.99
KDM1A-201ENST00000356634 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
KDM1A-201ENST00000356634 AP5Z1O43299 807 aa21.24■□□□□ 0.99
KDM1A-201ENST00000356634 F13A1P00488 732 aa21.23■□□□□ 0.99
KDM1A-201ENST00000356634 DRC7Q8IY82 874 aa21.23■□□□□ 0.99
KDM1A-201ENST00000356634 SLC26A8Q96RN1 970 aa21.23■□□□□ 0.99
KDM1A-201ENST00000356634 MYO5BQ9ULV0 1848 aa21.23■□□□□ 0.99
KDM1A-201ENST00000356634 HSPA4P34932 840 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms