RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MX1P20591 662 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
PTPRA-203ENST00000356147 TSPYL4Q9UJ04 414 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 FIBPO43427 364 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 CHMLP26374 656 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
PTPRA-203ENST00000356147 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
PTPRA-203ENST00000356147 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
PTPRA-203ENST00000356147 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 ADCY5O95622 1261 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 MCCP23508 829 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
PTPRA-203ENST00000356147 MLH3Q9UHC1 1453 aa12.27□□□□□ -0.44
PTPRA-203ENST00000356147 DYNC1I1O14576 645 aa12.27□□□□□ -0.44
PTPRA-203ENST00000356147 GNAI2P04899 355 aa12.27□□□□□ -0.44
PTPRA-203ENST00000356147 TERF1P54274 439 aa12.27□□□□□ -0.44
PTPRA-203ENST00000356147 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
PTPRA-203ENST00000356147 CPS1P31327 1500 aa12.27□□□□□ -0.45
PTPRA-203ENST00000356147 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
PTPRA-203ENST00000356147 SPC24Q8NBT2 197 aa12.27□□□□□ -0.45
PTPRA-203ENST00000356147 LRRFIP2Q9Y608 721 aaKnown RBP12.27□□□□□ -0.45
PTPRA-203ENST00000356147 CUL4AQ13619 759 aa12.26□□□□□ -0.45
PTPRA-203ENST00000356147 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
PTPRA-203ENST00000356147 CBX1P83916 185 aa12.26□□□□□ -0.45
PTPRA-203ENST00000356147 ALKQ9UM73 1620 aa12.25□□□□□ -0.45
PTPRA-203ENST00000356147 PTPRCP08575 1304 aa12.25□□□□□ -0.45
PTPRA-203ENST00000356147 TCHHQ07283 1943 aa12.25□□□□□ -0.45
PTPRA-203ENST00000356147 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPRA-203ENST00000356147 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
PTPRA-203ENST00000356147 SYAP1Q96A49 352 aaPredicted RBP12.25□□□□□ -0.45
PTPRA-203ENST00000356147 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
PTPRA-203ENST00000356147 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
PTPRA-203ENST00000356147 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
PTPRA-203ENST00000356147 OSBPL3Q9H4L5 887 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 MCM5P33992 734 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 MAP7D2Q96T17 732 aa12.24□□□□□ -0.45
PTPRA-203ENST00000356147 CDK12Q9NYV4 1490 aaPredicted RBP12.23□□□□□ -0.45
PTPRA-203ENST00000356147 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
PTPRA-203ENST00000356147 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 AP5Z1O43299 807 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 LARGE1O95461 756 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 WDR33Q9C0J8 1336 aaKnown RBP12.23□□□□□ -0.45
PTPRA-203ENST00000356147 PRR36Q9H6K5 1346 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 IGSF3O75054 1194 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 MCM2P49736 904 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
PTPRA-203ENST00000356147 FLIIQ13045 1269 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 CWC27Q6UX04 472 aaKnown RBP12.23□□□□□ -0.45
PTPRA-203ENST00000356147 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
PTPRA-203ENST00000356147 AK2P54819 239 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 METP08581 1390 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 SURF6O75683 361 aaKnown RBP12.22□□□□□ -0.45
PTPRA-203ENST00000356147 SYT1P21579 422 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 MYRIPQ8NFW9 859 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
PTPRA-203ENST00000356147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.22□□□□□ -0.45
PTPRA-203ENST00000356147 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
PTPRA-203ENST00000356147 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
PTPRA-203ENST00000356147 CPSF1Q10570 1443 aaKnown RBP12.21□□□□□ -0.45
PTPRA-203ENST00000356147 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.45
PTPRA-203ENST00000356147 PHF14O94880 888 aa12.21□□□□□ -0.45
PTPRA-203ENST00000356147 PIBF1Q8WXW3 757 aa12.21□□□□□ -0.45
PTPRA-203ENST00000356147 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
PTPRA-203ENST00000356147 ATP7BP35670 1465 aa12.21□□□□□ -0.45
PTPRA-203ENST00000356147 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.46
PTPRA-203ENST00000356147 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.46
PTPRA-203ENST00000356147 CAMK4Q16566 473 aa12.21□□□□□ -0.46
PTPRA-203ENST00000356147 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.46
PTPRA-203ENST00000356147 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.46
PTPRA-203ENST00000356147 FERMT3Q86UX7 667 aa12.21□□□□□ -0.46
PTPRA-203ENST00000356147 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.46
PTPRA-203ENST00000356147 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
PTPRA-203ENST00000356147 SNX14Q9Y5W7 946 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 STX6O43752 255 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 ZSCAN22P10073 491 aaPredicted RBP12.2□□□□□ -0.46
PTPRA-203ENST00000356147 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
PTPRA-203ENST00000356147 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
PTPRA-203ENST00000356147 ANXA1P04083 346 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
PTPRA-203ENST00000356147 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
PTPRA-203ENST00000356147 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms