RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 PRKAR2BP31323 418 aa27.87■■■□□ 2.05
MRPL39-202ENST00000352957 U2AF1Q01081 240 aaKnown RBP eCLIP27.87■■■□□ 2.05
MRPL39-202ENST00000352957 NFATC2IPQ8NCF5 419 aa27.87■■■□□ 2.05
MRPL39-202ENST00000352957 ZNF831Q5JPB2 1677 aa27.87■■■□□ 2.05
MRPL39-202ENST00000352957 MTFR1LQ9H019 292 aa27.86■■■□□ 2.05
MRPL39-202ENST00000352957 MRC1P22897 1456 aa27.85■■■□□ 2.05
MRPL39-202ENST00000352957 RNMTO43148 476 aaKnown RBP27.85■■■□□ 2.05
MRPL39-202ENST00000352957 RALBP1Q15311 655 aa27.85■■■□□ 2.05
MRPL39-202ENST00000352957 UBR3Q6ZT12 1888 aa27.85■■■□□ 2.05
MRPL39-202ENST00000352957 HMGB2P26583 209 aaKnown RBP27.84■■■□□ 2.05
MRPL39-202ENST00000352957 ATP6V1AP38606 617 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 PTGER2P43116 358 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 ITPK1Q13572 414 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 LINC00116Q8NCU8 138 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 GAS2L2Q8NHY3 880 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 PHACTR3Q96KR7 559 aa27.83■■■□□ 2.05
MRPL39-202ENST00000352957 PPP1R1BQ9UD71 204 aaPredicted RBP27.83■■■□□ 2.05
MRPL39-202ENST00000352957 COL5A3P25940 1745 aaPredicted RBP27.82■■■□□ 2.04
MRPL39-202ENST00000352957 RBM42Q9BTD8 480 aaKnown RBP27.82■■■□□ 2.04
MRPL39-202ENST00000352957 SLC52A2Q9HAB3 445 aa27.82■■■□□ 2.04
MRPL39-202ENST00000352957 MAP3K5Q99683 1374 aa27.82■■■□□ 2.04
MRPL39-202ENST00000352957 COL24A1Q17RW2 1714 aa27.81■■■□□ 2.04
MRPL39-202ENST00000352957 SLC4A9Q96Q91 983 aa27.81■■■□□ 2.04
MRPL39-202ENST00000352957 FCHSD2O94868 740 aa27.8■■■□□ 2.04
MRPL39-202ENST00000352957 AK7Q96M32 723 aa27.8■■■□□ 2.04
MRPL39-202ENST00000352957 COL23A1Q86Y22 540 aaPredicted RBP27.79■■■□□ 2.04
MRPL39-202ENST00000352957 SLC16A10Q8TF71 515 aa27.79■■■□□ 2.04
MRPL39-202ENST00000352957 SIPA1L3O60292 1781 aaPredicted RBP27.78■■■□□ 2.04
MRPL39-202ENST00000352957 GNAT3A8MTJ3 354 aa27.78■■■□□ 2.04
MRPL39-202ENST00000352957 SGIP1Q9BQI5 828 aa27.78■■■□□ 2.04
MRPL39-202ENST00000352957 MSH5O43196 834 aa27.77■■■□□ 2.04
MRPL39-202ENST00000352957 PTCD1O75127 700 aaKnown RBP27.77■■■□□ 2.04
MRPL39-202ENST00000352957 TJP1Q07157 1748 aa27.77■■■□□ 2.04
MRPL39-202ENST00000352957 AMIGO3Q86WK7 504 aa27.76■■■□□ 2.03
MRPL39-202ENST00000352957 CICQ96RK0 1608 aaPredicted RBP27.76■■■□□ 2.03
MRPL39-202ENST00000352957 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
MRPL39-202ENST00000352957 SMIM5Q71RC9 77 aa27.74■■■□□ 2.03
MRPL39-202ENST00000352957 IL17REQ8NFR9 667 aa27.74■■■□□ 2.03
MRPL39-202ENST00000352957 UBR2Q8IWV8 1755 aa27.73■■■□□ 2.03
MRPL39-202ENST00000352957 SLC39A6Q13433 755 aa27.73■■■□□ 2.03
MRPL39-202ENST00000352957 FLAD1Q8NFF5 587 aa27.73■■■□□ 2.03
MRPL39-202ENST00000352957 DLG5Q8TDM6 1919 aa27.73■■■□□ 2.03
MRPL39-202ENST00000352957 MYH14Q7Z406 1995 aaKnown RBP27.72■■■□□ 2.03
MRPL39-202ENST00000352957 GNPATO15228 680 aa27.72■■■□□ 2.03
MRPL39-202ENST00000352957 PHF14O94880 888 aa27.72■■■□□ 2.03
MRPL39-202ENST00000352957 KCPQ6ZWJ8 1503 aa27.72■■■□□ 2.03
MRPL39-202ENST00000352957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.7■■■□□ 2.02
MRPL39-202ENST00000352957 TEFQ10587 303 aa27.7■■■□□ 2.02
MRPL39-202ENST00000352957 SSFA2P28290 1259 aa27.69■■■□□ 2.02
MRPL39-202ENST00000352957 PRKRIP1Q9H875 184 aaPredicted RBP27.69■■■□□ 2.02
MRPL39-202ENST00000352957 CEMIPQ8WUJ3 1361 aa27.69■■■□□ 2.02
MRPL39-202ENST00000352957 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
MRPL39-202ENST00000352957 ARXQ96QS3 562 aa27.68■■■□□ 2.02
MRPL39-202ENST00000352957 CNTNAP4Q9C0A0 1308 aa27.67■■■□□ 2.02
MRPL39-202ENST00000352957 POLD1P28340 1107 aa27.67■■■□□ 2.02
MRPL39-202ENST00000352957 RC3H1Q5TC82 1133 aaKnown RBP27.67■■■□□ 2.02
MRPL39-202ENST00000352957 MSL1Q68DK7 614 aa27.67■■■□□ 2.02
MRPL39-202ENST00000352957 PLEKHF1Q96S99 279 aa27.67■■■□□ 2.02
MRPL39-202ENST00000352957 NEFMP07197 916 aa27.65■■■□□ 2.02
MRPL39-202ENST00000352957 FHDC1Q9C0D6 1143 aaPredicted RBP27.65■■■□□ 2.02
MRPL39-202ENST00000352957 MCM10Q7L590 875 aa27.64■■■□□ 2.02
MRPL39-202ENST00000352957 RTF1Q92541 710 aaKnown RBP27.64■■■□□ 2.02
MRPL39-202ENST00000352957 RTCBQ9Y3I0 505 aaKnown RBP27.64■■■□□ 2.02
MRPL39-202ENST00000352957 C4AP0C0L4 1744 aa27.64■■■□□ 2.01
MRPL39-202ENST00000352957 CRKLP46109 303 aaKnown RBP27.63■■■□□ 2.01
MRPL39-202ENST00000352957 DNAJC10Q8IXB1 793 aa27.63■■■□□ 2.01
MRPL39-202ENST00000352957 DCTN1Q14203 1278 aa27.62■■■□□ 2.01
MRPL39-202ENST00000352957 TTC5Q8N0Z6 440 aa27.62■■■□□ 2.01
MRPL39-202ENST00000352957 PNNQ9H307 717 aaKnown RBP27.62■■■□□ 2.01
MRPL39-202ENST00000352957 RPS6KA4O75676 772 aa27.61■■■□□ 2.01
MRPL39-202ENST00000352957 HTATSF1O43719 755 aaKnown RBP27.6■■■□□ 2.01
MRPL39-202ENST00000352957 TRAPPC3LQ5T215 181 aa27.6■■■□□ 2.01
MRPL39-202ENST00000352957 ZNF790Q6PG37 636 aa27.6■■■□□ 2.01
MRPL39-202ENST00000352957 SYT17Q9BSW7 474 aa27.6■■■□□ 2.01
MRPL39-202ENST00000352957 MAPK8IP3Q9UPT6 1336 aa27.6■■■□□ 2.01
MRPL39-202ENST00000352957 BTBD11A6QL63 1104 aa27.58■■■□□ 2.01
MRPL39-202ENST00000352957 NFE2L2Q16236 605 aa27.58■■■□□ 2.01
MRPL39-202ENST00000352957 VSIG10Q8N0Z9 540 aa27.58■■■□□ 2.01
MRPL39-202ENST00000352957 ZNF496Q96IT1 587 aaPredicted RBP27.58■■■□□ 2.01
MRPL39-202ENST00000352957 CYP19A1P11511 503 aaPredicted RBP27.57■■■□□ 2
MRPL39-202ENST00000352957 ADRA2BP18089 450 aa27.57■■■□□ 2
MRPL39-202ENST00000352957 INTS5Q6P9B9 1019 aaKnown RBP27.57■■■□□ 2
MRPL39-202ENST00000352957 KLHL34Q8N239 644 aa27.57■■■□□ 2
MRPL39-202ENST00000352957 ARHGEF1Q92888 912 aaKnown RBP27.57■■■□□ 2
MRPL39-202ENST00000352957 KCNQ3O43525 872 aa27.56■■■□□ 2
MRPL39-202ENST00000352957 CCDC87Q9NVE4 849 aa27.56■■■□□ 2
MRPL39-202ENST00000352957 HEG1Q9ULI3 1381 aa27.56■■■□□ 2
MRPL39-202ENST00000352957 WDR43Q15061 677 aaKnown RBP eCLIP27.54■■■□□ 2
MRPL39-202ENST00000352957 RFC4P35249 363 aa27.53■■■□□ 2
MRPL39-202ENST00000352957 FMNL2Q96PY5 1086 aa27.52■■■□□ 2
MRPL39-202ENST00000352957 CCDC146Q8IYE0 955 aa27.51■■□□□ 1.99
MRPL39-202ENST00000352957 KDM3BQ7LBC6 1761 aa27.5■■□□□ 1.99
MRPL39-202ENST00000352957 THUMPD2Q9BTF0 503 aaKnown RBP27.5■■□□□ 1.99
MRPL39-202ENST00000352957 ZBTB1Q9Y2K1 713 aa27.5■■□□□ 1.99
MRPL39-202ENST00000352957 SOS1Q07889 1333 aaPredicted RBP27.49■■□□□ 1.99
MRPL39-202ENST00000352957 TAF7Q15545 349 aaPredicted RBP27.49■■□□□ 1.99
MRPL39-202ENST00000352957 ADAMTS8Q9UP79 889 aa27.49■■□□□ 1.99
MRPL39-202ENST00000352957 STARD3NLO95772 234 aa27.48■■□□□ 1.99
MRPL39-202ENST00000352957 GYS1P13807 737 aa27.48■■□□□ 1.99
MRPL39-202ENST00000352957 SRP68Q9UHB9 627 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms