RNA–Protein interactions for RNA: ENST00000352011.7

ATP2A3-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 3,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-202ENST00000352011 ARHGEF10O15013 1369 aa18.34■□□□□ 0.53
ATP2A3-202ENST00000352011 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
ATP2A3-202ENST00000352011 ANO2Q9NQ90 1003 aa18.34■□□□□ 0.53
ATP2A3-202ENST00000352011 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.53
ATP2A3-202ENST00000352011 PI4KAP2A4QPH2 592 aa18.33■□□□□ 0.53
ATP2A3-202ENST00000352011 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.53
ATP2A3-202ENST00000352011 PI4KAP1Q8N8J0 262 aa18.33■□□□□ 0.53
ATP2A3-202ENST00000352011 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
ATP2A3-202ENST00000352011 DTNBO60941 627 aa18.33■□□□□ 0.52
ATP2A3-202ENST00000352011 SSFA2P28290 1259 aa18.33■□□□□ 0.52
ATP2A3-202ENST00000352011 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
ATP2A3-202ENST00000352011 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 PDE1AP54750 535 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 C3P01024 1663 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
ATP2A3-202ENST00000352011 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 GCP02774 474 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 RGS12O14924 1447 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 MON2Q7Z3U7 1717 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 GNAI3P08754 354 aa18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
ATP2A3-202ENST00000352011 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
ATP2A3-202ENST00000352011 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
ATP2A3-202ENST00000352011 PANK2Q9BZ23 570 aa18.3■□□□□ 0.52
ATP2A3-202ENST00000352011 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
ATP2A3-202ENST00000352011 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 IP6K1Q92551 441 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 USP44Q9H0E7 712 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 NEK4P51957 841 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 CHRNA2Q15822 529 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
ATP2A3-202ENST00000352011 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 MX1P20591 662 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 PKP1Q13835 747 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 UNC5CLQ8IV45 518 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
ATP2A3-202ENST00000352011 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
ATP2A3-202ENST00000352011 MYL6BP14649 208 aa18.27■□□□□ 0.52
ATP2A3-202ENST00000352011 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
ATP2A3-202ENST00000352011 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
ATP2A3-202ENST00000352011 PROSER3Q2NL68 480 aa18.27■□□□□ 0.51
ATP2A3-202ENST00000352011 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
ATP2A3-202ENST00000352011 KDRP35968 1356 aa18.26■□□□□ 0.51
ATP2A3-202ENST00000352011 ERC2O15083 957 aa18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 VIRMAQ69YN4 1812 aaKnown RBP18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 REC8O95072 547 aa18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
ATP2A3-202ENST00000352011 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 SNX21Q969T3 373 aa18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 SIL1Q9H173 461 aa18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
ATP2A3-202ENST00000352011 RABEP1Q15276 862 aa18.23■□□□□ 0.51
ATP2A3-202ENST00000352011 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
ATP2A3-202ENST00000352011 ST18O60284 1047 aa18.23■□□□□ 0.51
ATP2A3-202ENST00000352011 KCNH5Q8NCM2 988 aa18.22■□□□□ 0.51
ATP2A3-202ENST00000352011 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
ATP2A3-202ENST00000352011 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
ATP2A3-202ENST00000352011 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
ATP2A3-202ENST00000352011 DDX11L8A8MPP1 907 aa18.21■□□□□ 0.51
ATP2A3-202ENST00000352011 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
ATP2A3-202ENST00000352011 HSPA2P54652 639 aa18.21■□□□□ 0.51
ATP2A3-202ENST00000352011 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
ATP2A3-202ENST00000352011 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.51e-8■■□□□ 12.6
ATP2A3-202ENST00000352011 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
ATP2A3-202ENST00000352011 CWC27Q6UX04 472 aaKnown RBP18.19■□□□□ 0.5
ATP2A3-202ENST00000352011 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
ATP2A3-202ENST00000352011 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
ATP2A3-202ENST00000352011 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
ATP2A3-202ENST00000352011 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
ATP2A3-202ENST00000352011 ATF3P18847 181 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 IL25Q9H293 177 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 SPG7Q9UQ90 795 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 NFATC2IPQ8NCF5 419 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
ATP2A3-202ENST00000352011 L1TD1Q5T7N2 865 aaKnown RBP18.17■□□□□ 0.5
ATP2A3-202ENST00000352011 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
ATP2A3-202ENST00000352011 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms