RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 N4BP2Q86UW6 1770 aaPredicted RBP29.75■■■□□ 2.35
PTPA-202ENST00000347048 GNAI3P08754 354 aa29.74■■■□□ 2.35
PTPA-202ENST00000347048 PDE1AP54750 535 aa29.74■■■□□ 2.35
PTPA-202ENST00000347048 KLHL40Q2TBA0 621 aa29.74■■■□□ 2.35
PTPA-202ENST00000347048 CCDC30Q5VVM6 783 aa29.74■■■□□ 2.35
PTPA-202ENST00000347048 CACNA1FO60840 1977 aa29.74■■■□□ 2.35
PTPA-202ENST00000347048 APBB1O00213 710 aa29.73■■■□□ 2.35
PTPA-202ENST00000347048 CYP2E1P05181 493 aaPredicted RBP29.73■■■□□ 2.35
PTPA-202ENST00000347048 XRN1Q8IZH2 1706 aaKnown RBP29.72■■■□□ 2.35
PTPA-202ENST00000347048 PXDNLA1KZ92 1463 aa29.72■■■□□ 2.35
PTPA-202ENST00000347048 F6X3S4 739 aa29.72■■■□□ 2.35
PTPA-202ENST00000347048 RGPD8O14715 1765 aaPredicted RBP29.71■■■□□ 2.35
PTPA-202ENST00000347048 GNAT3A8MTJ3 354 aa29.71■■■□□ 2.35
PTPA-202ENST00000347048 FLIIQ13045 1269 aa29.7■■■□□ 2.34
PTPA-202ENST00000347048 SALL3Q9BXA9 1300 aa29.69■■■□□ 2.34
PTPA-202ENST00000347048 TUBGCP6Q96RT7 1819 aa29.69■■■□□ 2.34
PTPA-202ENST00000347048 CLCN1P35523 988 aa29.69■■■□□ 2.34
PTPA-202ENST00000347048 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.68■■■□□ 2.34
PTPA-202ENST00000347048 LRRCC1Q9C099 1032 aa29.68■■■□□ 2.34
PTPA-202ENST00000347048 SETD1BQ9UPS6 1966 aaKnown RBP29.67■■■□□ 2.34
PTPA-202ENST00000347048 ATP8B2P98198 1209 aa29.67■■■□□ 2.34
PTPA-202ENST00000347048 GAS2L3Q86XJ1 694 aa29.67■■■□□ 2.34
PTPA-202ENST00000347048 NWD1Q149M9 1564 aa29.67■■■□□ 2.34
PTPA-202ENST00000347048 MAP3K5Q99683 1374 aa29.67■■■□□ 2.34
PTPA-202ENST00000347048 DDX49Q9Y6V7 483 aaKnown RBP29.66■■■□□ 2.34
PTPA-202ENST00000347048 MARF1Q9Y4F3 1742 aaKnown RBP29.66■■■□□ 2.34
PTPA-202ENST00000347048 HOXC9P31274 260 aa29.65■■■□□ 2.34
PTPA-202ENST00000347048 FKBP5Q13451 457 aaPredicted RBP29.65■■■□□ 2.34
PTPA-202ENST00000347048 MCM2P49736 904 aa29.64■■■□□ 2.34
PTPA-202ENST00000347048 NLRP6P59044 892 aa29.64■■■□□ 2.34
PTPA-202ENST00000347048 SRCIN1Q9C0H9 1055 aa29.64■■■□□ 2.34
PTPA-202ENST00000347048 EXOC6BQ9Y2D4 811 aa29.63■■■□□ 2.33
PTPA-202ENST00000347048 AOX1Q06278 1338 aa29.62■■■□□ 2.33
PTPA-202ENST00000347048 MX1P20591 662 aa29.62■■■□□ 2.33
PTPA-202ENST00000347048 MCCP23508 829 aa29.62■■■□□ 2.33
PTPA-202ENST00000347048 STAP2Q9UGK3 403 aa29.62■■■□□ 2.33
PTPA-202ENST00000347048 THEMISQ8N1K5 641 aaPredicted RBP29.61■■■□□ 2.33
PTPA-202ENST00000347048 TAF7Q15545 349 aaPredicted RBP29.61■■■□□ 2.33
PTPA-202ENST00000347048 ESYT1Q9BSJ8 1104 aa29.61■■■□□ 2.33
PTPA-202ENST00000347048 ANAPC15P60006 121 aa29.6■■■□□ 2.33
PTPA-202ENST00000347048 MCTP1Q6DN14 999 aa29.59■■■□□ 2.33
PTPA-202ENST00000347048 ZNF142P52746 1687 aaPredicted RBP29.59■■■□□ 2.33
PTPA-202ENST00000347048 EPB41L2O43491 1005 aaKnown RBP29.59■■■□□ 2.33
PTPA-202ENST00000347048 ZNF445P59923 1031 aa29.59■■■□□ 2.33
PTPA-202ENST00000347048 TRIM44Q96DX7 344 aaPredicted RBP29.59■■■□□ 2.33
PTPA-202ENST00000347048 AK9Q5TCS8 1911 aa29.58■■■□□ 2.33
PTPA-202ENST00000347048 IL17RAQ96F46 866 aa29.58■■■□□ 2.33
PTPA-202ENST00000347048 LMBRD1Q9NUN5 540 aa29.58■■■□□ 2.33
PTPA-202ENST00000347048 IL17REQ8NFR9 667 aa29.57■■■□□ 2.32
PTPA-202ENST00000347048 PNMA6EA0A0J9YXQ4 647 aa29.57■■■□□ 2.32
PTPA-202ENST00000347048 CCDC173Q0VFZ6 552 aa29.57■■■□□ 2.32
PTPA-202ENST00000347048 ESPNB1AK53 854 aa29.55■■■□□ 2.32
PTPA-202ENST00000347048 ZGPATQ8N5A5 531 aaKnown RBP29.55■■■□□ 2.32
PTPA-202ENST00000347048 CHMP4AQ9BY43 222 aa29.55■■■□□ 2.32
PTPA-202ENST00000347048 LRRFIP2Q9Y608 721 aaKnown RBP29.54■■■□□ 2.32
PTPA-202ENST00000347048 CHMLP26374 656 aa29.53■■■□□ 2.32
PTPA-202ENST00000347048 PPP1R9BQ96SB3 815 aa29.53■■■□□ 2.32
PTPA-202ENST00000347048 UBTFL1P0CB47 393 aaPredicted RBP29.53■■■□□ 2.32
PTPA-202ENST00000347048 NASPP49321 788 aaPredicted RBP29.53■■■□□ 2.32
PTPA-202ENST00000347048 HSPA2P54652 639 aa29.53■■■□□ 2.32
PTPA-202ENST00000347048 ANP32BQ92688 251 aaKnown RBP29.53■■■□□ 2.32
PTPA-202ENST00000347048 RAB11FIP3O75154 756 aa29.52■■■□□ 2.32
PTPA-202ENST00000347048 NEK4P51957 841 aa29.52■■■□□ 2.32
PTPA-202ENST00000347048 USP44Q9H0E7 712 aa29.52■■■□□ 2.32
PTPA-202ENST00000347048 PKP1Q13835 747 aa29.52■■■□□ 2.32
PTPA-202ENST00000347048 SSH3Q8TE77 659 aa29.52■■■□□ 2.32
PTPA-202ENST00000347048 HOXB7P09629 217 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 CUL4AQ13619 759 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 HDGFL1Q5TGJ6 251 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 ABTB2Q8N961 1025 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 TMX3Q96JJ7 454 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 ZDHHC9Q9Y397 364 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 MED1Q15648 1581 aaPredicted RBP29.5■■■□□ 2.31
PTPA-202ENST00000347048 CEMIPQ8WUJ3 1361 aa29.5■■■□□ 2.31
PTPA-202ENST00000347048 INTS4Q96HW7 963 aaKnown RBP29.5■■■□□ 2.31
PTPA-202ENST00000347048 TRIM6-TRIM34B2RNG4 842 aa29.49■■■□□ 2.31
PTPA-202ENST00000347048 NECTIN2Q92692 538 aa29.48■■■□□ 2.31
PTPA-202ENST00000347048 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
PTPA-202ENST00000347048 ZSCAN23Q3MJ62 389 aa29.48■■■□□ 2.31
PTPA-202ENST00000347048 TSHZ3Q63HK5 1081 aa29.48■■■□□ 2.31
PTPA-202ENST00000347048 RILPL2Q969X0 211 aa29.48■■■□□ 2.31
PTPA-202ENST00000347048 LTN1O94822 1766 aa29.46■■■□□ 2.31
PTPA-202ENST00000347048 KCNA6P17658 529 aa29.46■■■□□ 2.31
PTPA-202ENST00000347048 CAVIN1Q6NZI2 390 aaKnown RBP29.46■■■□□ 2.31
PTPA-202ENST00000347048 ANO2Q9NQ90 1003 aa29.46■■■□□ 2.31
PTPA-202ENST00000347048 POLA2Q14181 598 aa29.46■■■□□ 2.31
PTPA-202ENST00000347048 NCLP19338 710 aaKnown RBP29.44■■■□□ 2.3
PTPA-202ENST00000347048 NUTM2GQ5VZR2 741 aa29.44■■■□□ 2.3
PTPA-202ENST00000347048 KDM3BQ7LBC6 1761 aa29.44■■■□□ 2.3
PTPA-202ENST00000347048 PRPF40AO75400 957 aaKnown RBP29.44■■■□□ 2.3
PTPA-202ENST00000347048 IP6K1Q92551 441 aa29.44■■■□□ 2.3
PTPA-202ENST00000347048 LTV1Q96GA3 475 aaPredicted RBP29.43■■■□□ 2.3
PTPA-202ENST00000347048 BRD1O95696 1058 aa29.43■■■□□ 2.3
PTPA-202ENST00000347048 ERBB4Q15303 1308 aa29.42■■■□□ 2.3
PTPA-202ENST00000347048 MBD3O95983 291 aa29.42■■■□□ 2.3
PTPA-202ENST00000347048 ANKLE2Q86XL3 938 aa29.42■■■□□ 2.3
PTPA-202ENST00000347048 PALD1Q9ULE6 856 aa29.42■■■□□ 2.3
PTPA-202ENST00000347048 NFAT5O94916 1531 aa29.42■■■□□ 2.3
PTPA-202ENST00000347048 ADGRL3Q9HAR2 1447 aa29.41■■■□□ 2.3
PTPA-202ENST00000347048 PHRF1Q9P1Y6 1649 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms