RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
TRIM3-201ENST00000345851 MYRIPQ8NFW9 859 aa26.06■■□□□ 1.76
TRIM3-201ENST00000345851 SDSP20132 328 aa26.06■■□□□ 1.76
TRIM3-201ENST00000345851 TSPY26PQ9H489 355 aa26.06■■□□□ 1.76
TRIM3-201ENST00000345851 RGPD8O14715 1765 aaPredicted RBP26.05■■□□□ 1.76
TRIM3-201ENST00000345851 CBX1P83916 185 aa26.05■■□□□ 1.76
TRIM3-201ENST00000345851 C17orf53Q8N3J3 647 aaPredicted RBP26.05■■□□□ 1.76
TRIM3-201ENST00000345851 TPRNQ4KMQ1 711 aa26.05■■□□□ 1.76
TRIM3-201ENST00000345851 NOL8Q76FK4 1167 aaKnown RBP26.05■■□□□ 1.76
TRIM3-201ENST00000345851 PLEKHG3A1L390 1219 aa26.05■■□□□ 1.76
TRIM3-201ENST00000345851 SMARCA5O60264 1052 aaPredicted RBP26.05■■□□□ 1.76
TRIM3-201ENST00000345851 IL13P35225 146 aa26.05■■□□□ 1.76
TRIM3-201ENST00000345851 MBD3O95983 291 aa26.04■■□□□ 1.76
TRIM3-201ENST00000345851 ZSCAN20P17040 1043 aaPredicted RBP26.04■■□□□ 1.76
TRIM3-201ENST00000345851 DMTNQ08495 405 aa26.04■■□□□ 1.76
TRIM3-201ENST00000345851 ITSN1Q15811 1721 aa26.04■■□□□ 1.76
TRIM3-201ENST00000345851 BRPF1P55201 1214 aaPredicted RBP26.03■■□□□ 1.76
TRIM3-201ENST00000345851 ABCC4O15439 1325 aa26.03■■□□□ 1.76
TRIM3-201ENST00000345851 ZNF710Q8N1W2 664 aa26.03■■□□□ 1.76
TRIM3-201ENST00000345851 ARHGAP45Q92619 1136 aa26.03■■□□□ 1.76
TRIM3-201ENST00000345851 MON2Q7Z3U7 1717 aa26.03■■□□□ 1.76
TRIM3-201ENST00000345851 GDPD2Q9HCC8 539 aa26.02■■□□□ 1.76
TRIM3-201ENST00000345851 PTCH1Q13635 1447 aa26.02■■□□□ 1.76
TRIM3-201ENST00000345851 CASC1Q6TDU7 716 aa26.02■■□□□ 1.76
TRIM3-201ENST00000345851 FCHSD2O94868 740 aa26.01■■□□□ 1.76
TRIM3-201ENST00000345851 DCTPP1Q9H773 170 aa26.01■■□□□ 1.76
TRIM3-201ENST00000345851 PIK3R4Q99570 1358 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 USP6P35125 1406 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 AEBP1Q8IUX7 1158 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 ZNF428Q96B54 188 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 AKAP12Q02952 1782 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 NEK4P51957 841 aa26.01■■□□□ 1.75
TRIM3-201ENST00000345851 LRRC7Q96NW7 1537 aa26■■□□□ 1.75
TRIM3-201ENST00000345851 CFAP44Q96MT7 982 aa26■■□□□ 1.75
TRIM3-201ENST00000345851 TTC12Q9H892 705 aaPredicted RBP26■■□□□ 1.75
TRIM3-201ENST00000345851 TMX3Q96JJ7 454 aa25.99■■□□□ 1.75
TRIM3-201ENST00000345851 USP25Q9UHP3 1055 aa25.99■■□□□ 1.75
TRIM3-201ENST00000345851 C14orf37Q86TY3 774 aa25.98■■□□□ 1.75
TRIM3-201ENST00000345851 TWISTNBQ3B726 338 aaPredicted RBP25.98■■□□□ 1.75
TRIM3-201ENST00000345851 NOLC1Q14978 699 aaKnown RBP eCLIP25.97■■□□□ 1.75
TRIM3-201ENST00000345851 MBIPQ9NS73 344 aa25.97■■□□□ 1.75
TRIM3-201ENST00000345851 DIP2AQ14689 1571 aa25.97■■□□□ 1.75
TRIM3-201ENST00000345851 REC8O95072 547 aa25.97■■□□□ 1.75
TRIM3-201ENST00000345851 FAM83GA6ND36 823 aa25.96■■□□□ 1.75
TRIM3-201ENST00000345851 GADD45BO75293 160 aaPredicted RBP25.96■■□□□ 1.75
TRIM3-201ENST00000345851 DCTN1Q14203 1278 aa25.96■■□□□ 1.75
TRIM3-201ENST00000345851 PPP4R3BQ5MIZ7 849 aa25.96■■□□□ 1.75
TRIM3-201ENST00000345851 UTP14CQ5TAP6 766 aaKnown RBP25.96■■□□□ 1.75
TRIM3-201ENST00000345851 C8orf58Q8NAV2 365 aa25.96■■□□□ 1.75
TRIM3-201ENST00000345851 EIF4A2Q14240 407 aaKnown RBP25.95■■□□□ 1.75
TRIM3-201ENST00000345851 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.74
TRIM3-201ENST00000345851 SULT6B1Q6IMI4 303 aa25.94■■□□□ 1.74
TRIM3-201ENST00000345851 API5Q9BZZ5 524 aaKnown RBP25.94■■□□□ 1.74
TRIM3-201ENST00000345851 AATKQ6ZMQ8 1374 aa25.94■■□□□ 1.74
TRIM3-201ENST00000345851 BRD1O95696 1058 aa25.94■■□□□ 1.74
TRIM3-201ENST00000345851 ATP2B3Q16720 1220 aa25.94■■□□□ 1.74
TRIM3-201ENST00000345851 SYAP1Q96A49 352 aaPredicted RBP25.94■■□□□ 1.74
TRIM3-201ENST00000345851 PRIMPOLQ96LW4 560 aa25.94■■□□□ 1.74
TRIM3-201ENST00000345851 ERC2O15083 957 aa25.93■■□□□ 1.74
TRIM3-201ENST00000345851 NLRP6P59044 892 aa25.93■■□□□ 1.74
TRIM3-201ENST00000345851 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
TRIM3-201ENST00000345851 GNAI1P63096 354 aa25.92■■□□□ 1.74
TRIM3-201ENST00000345851 SPDYE4A6NLX3 237 aa25.92■■□□□ 1.74
TRIM3-201ENST00000345851 HMGN5P82970 282 aaKnown RBP25.92■■□□□ 1.74
TRIM3-201ENST00000345851 PLCB2Q00722 1185 aa25.92■■□□□ 1.74
TRIM3-201ENST00000345851 NFE2L2Q16236 605 aa25.92■■□□□ 1.74
TRIM3-201ENST00000345851 ADAMTSL3P82987 1691 aa25.91■■□□□ 1.74
TRIM3-201ENST00000345851 KIF3AQ9Y496 699 aa25.91■■□□□ 1.74
TRIM3-201ENST00000345851 CDK12Q9NYV4 1490 aaPredicted RBP25.91■■□□□ 1.74
TRIM3-201ENST00000345851 OVOS2A0A0J9YW53 1432 aa25.9■■□□□ 1.74
TRIM3-201ENST00000345851 OVOS2Q6IE36 1432 aa25.9■■□□□ 1.74
TRIM3-201ENST00000345851 ADCY5O95622 1261 aa25.9■■□□□ 1.74
TRIM3-201ENST00000345851 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
TRIM3-201ENST00000345851 XRN1Q8IZH2 1706 aaKnown RBP25.9■■□□□ 1.74
TRIM3-201ENST00000345851 ANKRD44Q8N8A2 993 aa25.89■■□□□ 1.74
TRIM3-201ENST00000345851 SETD1BQ9UPS6 1966 aaKnown RBP25.89■■□□□ 1.74
TRIM3-201ENST00000345851 BCL2L12Q9HB09 334 aa25.88■■□□□ 1.73
TRIM3-201ENST00000345851 ABTB2Q8N961 1025 aa25.88■■□□□ 1.73
TRIM3-201ENST00000345851 IFT57Q9NWB7 429 aa25.88■■□□□ 1.73
TRIM3-201ENST00000345851 NRKQ7Z2Y5 1582 aa25.87■■□□□ 1.73
TRIM3-201ENST00000345851 TSHZ3Q63HK5 1081 aa25.87■■□□□ 1.73
TRIM3-201ENST00000345851 USP48Q86UV5 1035 aa25.87■■□□□ 1.73
TRIM3-201ENST00000345851 PHF14O94880 888 aa25.87■■□□□ 1.73
TRIM3-201ENST00000345851 HCLS1P14317 486 aaPredicted RBP25.87■■□□□ 1.73
TRIM3-201ENST00000345851 ESCO1Q5FWF5 840 aa25.87■■□□□ 1.73
TRIM3-201ENST00000345851 KRT24Q2M2I5 525 aa25.86■■□□□ 1.73
TRIM3-201ENST00000345851 CEP85Q6P2H3 762 aa25.86■■□□□ 1.73
TRIM3-201ENST00000345851 SSH2Q76I76 1423 aa25.86■■□□□ 1.73
TRIM3-201ENST00000345851 PALD1Q9ULE6 856 aa25.86■■□□□ 1.73
TRIM3-201ENST00000345851 IGSF3O75054 1194 aa25.85■■□□□ 1.73
TRIM3-201ENST00000345851 GTF2F1P35269 517 aaKnown RBP eCLIP25.85■■□□□ 1.73
TRIM3-201ENST00000345851 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
TRIM3-201ENST00000345851 AMPHP49418 695 aa25.85■■□□□ 1.73
TRIM3-201ENST00000345851 ATP10DQ9P241 1426 aa25.84■■□□□ 1.73
TRIM3-201ENST00000345851 FKBP5Q13451 457 aaPredicted RBP25.83■■□□□ 1.73
TRIM3-201ENST00000345851 UPF3BQ9BZI7 483 aaKnown RBP25.83■■□□□ 1.73
TRIM3-201ENST00000345851 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
TRIM3-201ENST00000345851 PDCL2Q8N4E4 241 aa25.82■■□□□ 1.72
TRIM3-201ENST00000345851 TCHHQ07283 1943 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms