RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 ERLIN2O94905 339 aa19.02■□□□□ 0.64
RTL6-201ENST00000341255 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
RTL6-201ENST00000341255 IMMTQ16891 758 aaKnown RBP19.02■□□□□ 0.64
RTL6-201ENST00000341255 LARP1Q6PKG0 1096 aaKnown RBP19.02■□□□□ 0.64
RTL6-201ENST00000341255 PRDM10Q9NQV6 1147 aa19.02■□□□□ 0.64
RTL6-201ENST00000341255 WASF1Q92558 559 aa19.02■□□□□ 0.63
RTL6-201ENST00000341255 TANGO6Q9C0B7 1094 aa19.02■□□□□ 0.63
RTL6-201ENST00000341255 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
RTL6-201ENST00000341255 CAMSAP2Q08AD1 1489 aa19.01■□□□□ 0.63
RTL6-201ENST00000341255 PTPN14Q15678 1187 aa19.01■□□□□ 0.63
RTL6-201ENST00000341255 CCDC102AQ96A19 550 aa19.01■□□□□ 0.63
RTL6-201ENST00000341255 LRPPRCP42704 1394 aaKnown RBP19.01■□□□□ 0.63
RTL6-201ENST00000341255 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
RTL6-201ENST00000341255 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
RTL6-201ENST00000341255 PRPF40BQ6NWY9 871 aaKnown RBP19.01■□□□□ 0.63
RTL6-201ENST00000341255 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
RTL6-201ENST00000341255 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
RTL6-201ENST00000341255 AIDAQ96BJ3 306 aa19■□□□□ 0.63
RTL6-201ENST00000341255 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
RTL6-201ENST00000341255 CENPHQ9H3R5 247 aa19■□□□□ 0.63
RTL6-201ENST00000341255 ABCC5O15440 1437 aa19■□□□□ 0.63
RTL6-201ENST00000341255 AMOTQ4VCS5 1084 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
RTL6-201ENST00000341255 AKAP2Q9Y2D5 859 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 HSP90AB3PQ58FF7 597 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 TXLNBQ8N3L3 684 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 TMCO3Q6UWJ1 677 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
RTL6-201ENST00000341255 SFPQP23246 707 aaKnown RBP eCLIP18.99■□□□□ 0.63
RTL6-201ENST00000341255 NME9Q86XW9 330 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 BMP2KQ9NSY1 1161 aaPredicted RBP18.99■□□□□ 0.63
RTL6-201ENST00000341255 USP25Q9UHP3 1055 aa18.99■□□□□ 0.63
RTL6-201ENST00000341255 METTL24Q5JXM2 366 aa18.98■□□□□ 0.63
RTL6-201ENST00000341255 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
RTL6-201ENST00000341255 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
RTL6-201ENST00000341255 ARHGAP29Q52LW3 1261 aa18.98■□□□□ 0.63
RTL6-201ENST00000341255 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
RTL6-201ENST00000341255 KIF2AO00139 706 aaPredicted RBP18.97■□□□□ 0.63
RTL6-201ENST00000341255 PRKCSHP14314 528 aaPredicted RBP18.97■□□□□ 0.63
RTL6-201ENST00000341255 SCAND2PQ9GZW5 306 aaPredicted RBP18.97■□□□□ 0.63
RTL6-201ENST00000341255 PCF11O94913 1555 aaKnown RBP18.97■□□□□ 0.63
RTL6-201ENST00000341255 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
RTL6-201ENST00000341255 CD109Q6YHK3 1445 aa18.97■□□□□ 0.63
RTL6-201ENST00000341255 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
RTL6-201ENST00000341255 IQCEQ6IPM2 695 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 PDCL3Q9H2J4 239 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 PLCD4Q9BRC7 762 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 ABCF2Q9UG63 623 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 KIF18AQ8NI77 898 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 ANO10Q9NW15 660 aa18.96■□□□□ 0.63
RTL6-201ENST00000341255 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
RTL6-201ENST00000341255 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
RTL6-201ENST00000341255 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
RTL6-201ENST00000341255 TRIM27P14373 513 aa18.95■□□□□ 0.62
RTL6-201ENST00000341255 ZSCAN29Q8IWY8 852 aaPredicted RBP18.95■□□□□ 0.62
RTL6-201ENST00000341255 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 IGHDP01880 384 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 SF3B2Q13435 895 aaKnown RBP18.94■□□□□ 0.62
RTL6-201ENST00000341255 SH2B1Q9NRF2 756 aaPredicted RBP18.94■□□□□ 0.62
RTL6-201ENST00000341255 SSBP05455 408 aaKnown RBP eCLIP18.94■□□□□ 0.62
RTL6-201ENST00000341255 NEFHP12036 1026 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 BOLA2Q9H3K6 86 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 KIAA1328Q86T90 577 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 CEP131Q9UPN4 1083 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 WASLO00401 505 aaPredicted RBP18.94■□□□□ 0.62
RTL6-201ENST00000341255 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
RTL6-201ENST00000341255 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
RTL6-201ENST00000341255 MYD88Q99836 296 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 PLB1Q6P1J6 1458 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 DNAAF4Q8WXU2 420 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 ZSCAN12O43309 604 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 IFIT1P09914 478 aaKnown RBP18.93■□□□□ 0.62
RTL6-201ENST00000341255 TBC1D9Q6ZT07 1266 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
RTL6-201ENST00000341255 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
RTL6-201ENST00000341255 TNNT1P13805 278 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 URI1O94763 535 aaPredicted RBP18.92■□□□□ 0.62
RTL6-201ENST00000341255 BAG4O95429 457 aaKnown RBP18.92■□□□□ 0.62
RTL6-201ENST00000341255 TAF3Q5VWG9 929 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
RTL6-201ENST00000341255 F6X3S4 739 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
RTL6-201ENST00000341255 TAX1BP1Q86VP1 789 aa18.92■□□□□ 0.62
RTL6-201ENST00000341255 CCDC148Q8NFR7 591 aa18.91■□□□□ 0.62
RTL6-201ENST00000341255 C16orf45Q96MC5 204 aaPredicted RBP18.91■□□□□ 0.62
RTL6-201ENST00000341255 ZNF287Q9HBT7 754 aa18.91■□□□□ 0.62
RTL6-201ENST00000341255 DBF4Q9UBU7 674 aaPredicted RBP18.91■□□□□ 0.62
RTL6-201ENST00000341255 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
RTL6-201ENST00000341255 GOLGA6L7A0A1B0GV03 622 aa18.91■□□□□ 0.62
RTL6-201ENST00000341255 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms