RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 HSCBQ8IWL3 235 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 CLCN1P35523 988 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 MRE11P49959 708 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
VMAC-201ENST00000339485 DDX11L8A8MPP1 907 aa23.2■■□□□ 1.3
VMAC-201ENST00000339485 HTATSF1O43719 755 aaKnown RBP23.2■■□□□ 1.3
VMAC-201ENST00000339485 PIP4K2BP78356 416 aa23.2■■□□□ 1.3
VMAC-201ENST00000339485 TOM1O60784 492 aa23.19■■□□□ 1.3
VMAC-201ENST00000339485 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
VMAC-201ENST00000339485 RBM25P49756 843 aaKnown RBP23.19■■□□□ 1.3
VMAC-201ENST00000339485 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
VMAC-201ENST00000339485 COL22A1Q8NFW1 1626 aaPredicted RBP23.18■■□□□ 1.3
VMAC-201ENST00000339485 CHL1O00533 1208 aa23.17■■□□□ 1.3
VMAC-201ENST00000339485 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
VMAC-201ENST00000339485 TSPYL6Q8N831 410 aa23.17■■□□□ 1.3
VMAC-201ENST00000339485 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
VMAC-201ENST00000339485 ELL2O00472 640 aaPredicted RBP23.17■■□□□ 1.3
VMAC-201ENST00000339485 IL17REQ8NFR9 667 aa23.17■■□□□ 1.3
VMAC-201ENST00000339485 ZBTB40Q9NUA8 1239 aa23.17■■□□□ 1.3
VMAC-201ENST00000339485 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
VMAC-201ENST00000339485 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
VMAC-201ENST00000339485 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
VMAC-201ENST00000339485 SNX21Q969T3 373 aa23.16■■□□□ 1.3
VMAC-201ENST00000339485 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
VMAC-201ENST00000339485 MEGF6O75095 1541 aa23.16■■□□□ 1.3
VMAC-201ENST00000339485 TMEM57Q8N5G2 664 aa23.15■■□□□ 1.3
VMAC-201ENST00000339485 C8orf58Q8NAV2 365 aa23.15■■□□□ 1.3
VMAC-201ENST00000339485 GRPEL1Q9HAV7 217 aa23.15■■□□□ 1.3
VMAC-201ENST00000339485 ISY1Q9ULR0 285 aaKnown RBP23.15■■□□□ 1.3
VMAC-201ENST00000339485 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
VMAC-201ENST00000339485 VAMP4O75379 141 aa23.13■■□□□ 1.29
VMAC-201ENST00000339485 NUCB1Q02818 461 aa23.13■■□□□ 1.29
VMAC-201ENST00000339485 TWISTNBQ3B726 338 aaPredicted RBP23.13■■□□□ 1.29
VMAC-201ENST00000339485 UBAP1LF5GYI3 381 aa23.13■■□□□ 1.29
VMAC-201ENST00000339485 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
VMAC-201ENST00000339485 TSPYL4Q9UJ04 414 aa23.13■■□□□ 1.29
VMAC-201ENST00000339485 KRT24Q2M2I5 525 aa23.12■■□□□ 1.29
VMAC-201ENST00000339485 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
VMAC-201ENST00000339485 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
VMAC-201ENST00000339485 TATP17735 454 aaPredicted RBP23.11■■□□□ 1.29
VMAC-201ENST00000339485 TOM1L2Q6ZVM7 507 aa23.11■■□□□ 1.29
VMAC-201ENST00000339485 STRN4Q9NRL3 753 aa23.11■■□□□ 1.29
VMAC-201ENST00000339485 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
VMAC-201ENST00000339485 MPRIPQ6WCQ1 1025 aa23.1■■□□□ 1.29
VMAC-201ENST00000339485 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
VMAC-201ENST00000339485 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
VMAC-201ENST00000339485 TNPO1Q92973 898 aaKnown RBP23.1■■□□□ 1.29
VMAC-201ENST00000339485 ZNF428Q96B54 188 aa23.1■■□□□ 1.29
VMAC-201ENST00000339485 NAP1L5Q96NT1 182 aaPredicted RBP23.09■■□□□ 1.29
VMAC-201ENST00000339485 CIZ1Q9ULV3 898 aaPredicted RBP23.09■■□□□ 1.29
VMAC-201ENST00000339485 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
VMAC-201ENST00000339485 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
VMAC-201ENST00000339485 LNPKQ9C0E8 428 aa23.08■■□□□ 1.29
VMAC-201ENST00000339485 EVA1CP58658 441 aa23.07■■□□□ 1.28
VMAC-201ENST00000339485 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
VMAC-201ENST00000339485 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
VMAC-201ENST00000339485 TAF7Q15545 349 aaPredicted RBP23.07■■□□□ 1.28
VMAC-201ENST00000339485 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
VMAC-201ENST00000339485 CHD1LQ86WJ1 897 aa23.07■■□□□ 1.28
VMAC-201ENST00000339485 RAB3GAP1Q15042 981 aa23.06■■□□□ 1.28
VMAC-201ENST00000339485 BMP2KLQ5H9B9 411 aa23.06■■□□□ 1.28
VMAC-201ENST00000339485 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
VMAC-201ENST00000339485 KIF2CQ99661 725 aa23.06■■□□□ 1.28
VMAC-201ENST00000339485 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
VMAC-201ENST00000339485 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
VMAC-201ENST00000339485 GBP4Q96PP9 640 aa23.05■■□□□ 1.28
VMAC-201ENST00000339485 ADAMTS7Q9UKP4 1686 aa23.05■■□□□ 1.28
VMAC-201ENST00000339485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.04■■□□□ 1.28
VMAC-201ENST00000339485 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
VMAC-201ENST00000339485 ERBB4Q15303 1308 aa23.04■■□□□ 1.28
VMAC-201ENST00000339485 OVOS2A0A0G2JMS6 1433 aa23.04■■□□□ 1.28
VMAC-201ENST00000339485 ESPNB1AK53 854 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
VMAC-201ENST00000339485 TEFQ10587 303 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 GAS2L3Q86XJ1 694 aa23.03■■□□□ 1.28
VMAC-201ENST00000339485 MRPL50Q8N5N7 158 aaKnown RBP23.03■■□□□ 1.28
VMAC-201ENST00000339485 SIPA1L3O60292 1781 aaPredicted RBP23.02■■□□□ 1.28
VMAC-201ENST00000339485 PHKG2P15735 406 aa23.02■■□□□ 1.28
VMAC-201ENST00000339485 BABAM1Q9NWV8 329 aa23.02■■□□□ 1.28
VMAC-201ENST00000339485 PLCH1Q4KWH8 1693 aa23.02■■□□□ 1.27
VMAC-201ENST00000339485 ADAMTS2O95450 1211 aa23.01■■□□□ 1.27
VMAC-201ENST00000339485 BRPF1P55201 1214 aaPredicted RBP23.01■■□□□ 1.27
VMAC-201ENST00000339485 KDM6AO15550 1401 aaPredicted RBP23■■□□□ 1.27
VMAC-201ENST00000339485 CD2BP2O95400 341 aaKnown RBP23■■□□□ 1.27
VMAC-201ENST00000339485 SKOR2Q2VWA4 1001 aaPredicted RBP23■■□□□ 1.27
VMAC-201ENST00000339485 CYP27B1O15528 508 aa22.99■■□□□ 1.27
VMAC-201ENST00000339485 IFNL2Q8IZJ0 200 aa22.99■■□□□ 1.27
VMAC-201ENST00000339485 CERKQ8TCT0 537 aa22.99■■□□□ 1.27
VMAC-201ENST00000339485 NUTM2BA6NNL0 878 aaPredicted RBP22.99■■□□□ 1.27
VMAC-201ENST00000339485 NUTM2EB1AL46 878 aaPredicted RBP22.99■■□□□ 1.27
VMAC-201ENST00000339485 NUTM2AQ8IVF1 878 aaPredicted RBP22.99■■□□□ 1.27
VMAC-201ENST00000339485 IL2RBP14784 551 aa22.98■■□□□ 1.27
VMAC-201ENST00000339485 PTMSP20962 102 aa22.98■■□□□ 1.27
VMAC-201ENST00000339485 BTBD11A6QL63 1104 aa22.97■■□□□ 1.27
VMAC-201ENST00000339485 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms