RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ZFYVE9O95405 1425 aa24.66■■□□□ 1.54
RUNX3-202ENST00000338888 PRAM1Q96QH2 718 aa24.66■■□□□ 1.54
RUNX3-202ENST00000338888 TSHZ3Q63HK5 1081 aa24.65■■□□□ 1.54
RUNX3-202ENST00000338888 BCL2L12Q9HB09 334 aa24.65■■□□□ 1.54
RUNX3-202ENST00000338888 ANKRD26Q9UPS8 1709 aa24.65■■□□□ 1.54
RUNX3-202ENST00000338888 HCLS1P14317 486 aaPredicted RBP24.65■■□□□ 1.54
RUNX3-202ENST00000338888 RTL1A6NKG5 1358 aa24.65■■□□□ 1.54
RUNX3-202ENST00000338888 PDE1AP54750 535 aa24.65■■□□□ 1.54
RUNX3-202ENST00000338888 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
RUNX3-202ENST00000338888 INTS4Q96HW7 963 aaKnown RBP24.65■■□□□ 1.54
RUNX3-202ENST00000338888 CDC42BPGQ6DT37 1551 aa24.64■■□□□ 1.54
RUNX3-202ENST00000338888 PLCB2Q00722 1185 aa24.64■■□□□ 1.53
RUNX3-202ENST00000338888 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.53
RUNX3-202ENST00000338888 SPDYE4A6NLX3 237 aa24.63■■□□□ 1.53
RUNX3-202ENST00000338888 UPF3BQ9BZI7 483 aaKnown RBP24.63■■□□□ 1.53
RUNX3-202ENST00000338888 MSH6P52701 1360 aa24.63■■□□□ 1.53
RUNX3-202ENST00000338888 SPTLC3Q9NUV7 552 aa24.63■■□□□ 1.53
RUNX3-202ENST00000338888 ESYT1Q9BSJ8 1104 aa24.62■■□□□ 1.53
RUNX3-202ENST00000338888 GTPBP4Q9BZE4 634 aaKnown RBP24.62■■□□□ 1.53
RUNX3-202ENST00000338888 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
RUNX3-202ENST00000338888 MCCP23508 829 aa24.61■■□□□ 1.53
RUNX3-202ENST00000338888 IL13P35225 146 aa24.61■■□□□ 1.53
RUNX3-202ENST00000338888 CCDC183Q5T5S1 534 aa24.61■■□□□ 1.53
RUNX3-202ENST00000338888 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
RUNX3-202ENST00000338888 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
RUNX3-202ENST00000338888 LMOD3Q0VAK6 560 aa24.6■■□□□ 1.53
RUNX3-202ENST00000338888 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
RUNX3-202ENST00000338888 PDCL2Q8N4E4 241 aa24.6■■□□□ 1.53
RUNX3-202ENST00000338888 OSBPL3Q9H4L5 887 aa24.6■■□□□ 1.53
RUNX3-202ENST00000338888 WDR33Q9C0J8 1336 aaKnown RBP24.59■■□□□ 1.53
RUNX3-202ENST00000338888 RGS12O14924 1447 aa24.58■■□□□ 1.53
RUNX3-202ENST00000338888 RIMS2Q9UQ26 1411 aa24.58■■□□□ 1.53
RUNX3-202ENST00000338888 KDM4AO75164 1064 aa24.58■■□□□ 1.53
RUNX3-202ENST00000338888 CEBPAP49715 358 aaPredicted RBP24.58■■□□□ 1.53
RUNX3-202ENST00000338888 SRCIN1Q9C0H9 1055 aa24.58■■□□□ 1.53
RUNX3-202ENST00000338888 CNPY2Q9Y2B0 182 aa24.58■■□□□ 1.53
RUNX3-202ENST00000338888 MX1P20591 662 aa24.58■■□□□ 1.52
RUNX3-202ENST00000338888 RILPL2Q969X0 211 aa24.57■■□□□ 1.52
RUNX3-202ENST00000338888 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
RUNX3-202ENST00000338888 HMMRO75330 724 aa24.56■■□□□ 1.52
RUNX3-202ENST00000338888 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
RUNX3-202ENST00000338888 RIOK3O14730 519 aaKnown RBP24.56■■□□□ 1.52
RUNX3-202ENST00000338888 EXOC6BQ9Y2D4 811 aa24.56■■□□□ 1.52
RUNX3-202ENST00000338888 PYCARDQ9ULZ3 195 aa24.55■■□□□ 1.52
RUNX3-202ENST00000338888 U2AF2P26368 475 aaKnown RBP eCLIP24.55■■□□□ 1.52
RUNX3-202ENST00000338888 ANAPC15P60006 121 aa24.55■■□□□ 1.52
RUNX3-202ENST00000338888 TRIM6-TRIM34B2RNG4 842 aa24.54■■□□□ 1.52
RUNX3-202ENST00000338888 KIF20AO95235 890 aa24.54■■□□□ 1.52
RUNX3-202ENST00000338888 KIAA1524Q8TCG1 905 aa24.54■■□□□ 1.52
RUNX3-202ENST00000338888 IGSF3O75054 1194 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 CHMLP26374 656 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 PTPRMP28827 1452 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 TCHHQ07283 1943 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 AP5Z1O43299 807 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 KCNF1Q9H3M0 494 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 DIAPH3Q9NSV4 1193 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 ALKQ9UM73 1620 aa24.53■■□□□ 1.52
RUNX3-202ENST00000338888 LETM1O95202 739 aaPredicted RBP24.52■■□□□ 1.52
RUNX3-202ENST00000338888 CHAF1AQ13111 956 aaPredicted RBP24.52■■□□□ 1.52
RUNX3-202ENST00000338888 GIMAP6Q6P9H5 292 aa24.52■■□□□ 1.52
RUNX3-202ENST00000338888 SLC4A10Q6U841 1118 aa24.52■■□□□ 1.52
RUNX3-202ENST00000338888 TNRQ92752 1358 aa24.52■■□□□ 1.52
RUNX3-202ENST00000338888 TMEM87AQ8NBN3 555 aa24.52■■□□□ 1.52
RUNX3-202ENST00000338888 SPC24Q8NBT2 197 aa24.52■■□□□ 1.52
RUNX3-202ENST00000338888 ZRANB1Q9UGI0 708 aa24.5■■□□□ 1.51
RUNX3-202ENST00000338888 KIF20BQ96Q89 1820 aa24.5■■□□□ 1.51
RUNX3-202ENST00000338888 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
RUNX3-202ENST00000338888 UBE2HP62256 183 aa24.5■■□□□ 1.51
RUNX3-202ENST00000338888 WAPLQ7Z5K2 1190 aa24.5■■□□□ 1.51
RUNX3-202ENST00000338888 RPAP1Q9BWH6 1393 aaPredicted RBP24.5■■□□□ 1.51
RUNX3-202ENST00000338888 MAP2P11137 1827 aaKnown RBP24.5■■□□□ 1.51
RUNX3-202ENST00000338888 FIBPO43427 364 aa24.49■■□□□ 1.51
RUNX3-202ENST00000338888 PTPRCP08575 1304 aa24.49■■□□□ 1.51
RUNX3-202ENST00000338888 ANKRD7Q92527 254 aa24.49■■□□□ 1.51
RUNX3-202ENST00000338888 DLG5Q8TDM6 1919 aa24.49■■□□□ 1.51
RUNX3-202ENST00000338888 F6X3S4 739 aa24.48■■□□□ 1.51
RUNX3-202ENST00000338888 ZSCAN22P10073 491 aaPredicted RBP24.48■■□□□ 1.51
RUNX3-202ENST00000338888 LARP6Q9BRS8 491 aaKnown RBP24.48■■□□□ 1.51
RUNX3-202ENST00000338888 RRS1Q15050 365 aaKnown RBP24.48■■□□□ 1.51
RUNX3-202ENST00000338888 NME9Q86XW9 330 aa24.48■■□□□ 1.51
RUNX3-202ENST00000338888 SALL3Q9BXA9 1300 aa24.47■■□□□ 1.51
RUNX3-202ENST00000338888 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
RUNX3-202ENST00000338888 HAP1P54257 671 aaPredicted RBP24.47■■□□□ 1.51
RUNX3-202ENST00000338888 UNC5CLQ8IV45 518 aa24.47■■□□□ 1.51
RUNX3-202ENST00000338888 FUCA2Q9BTY2 467 aa24.47■■□□□ 1.51
RUNX3-202ENST00000338888 MCM10Q7L590 875 aa24.47■■□□□ 1.51
RUNX3-202ENST00000338888 IL25Q9H293 177 aa24.47■■□□□ 1.51
RUNX3-202ENST00000338888 LRRCC1Q9C099 1032 aa24.46■■□□□ 1.51
RUNX3-202ENST00000338888 CHL1O00533 1208 aa24.45■■□□□ 1.5
RUNX3-202ENST00000338888 CTIFO43310 598 aaKnown RBP24.44■■□□□ 1.5
RUNX3-202ENST00000338888 STX6O43752 255 aa24.44■■□□□ 1.5
RUNX3-202ENST00000338888 SYT1P21579 422 aa24.44■■□□□ 1.5
RUNX3-202ENST00000338888 G2E3Q7L622 706 aa24.44■■□□□ 1.5
RUNX3-202ENST00000338888 KIAA0232Q92628 1395 aa24.43■■□□□ 1.5
RUNX3-202ENST00000338888 DTNBO60941 627 aa24.43■■□□□ 1.5
RUNX3-202ENST00000338888 AEBP1Q8IUX7 1158 aa24.43■■□□□ 1.5
RUNX3-202ENST00000338888 TPM3P06753 285 aa24.42■■□□□ 1.5
RUNX3-202ENST00000338888 F13A1P00488 732 aa24.42■■□□□ 1.5
RUNX3-202ENST00000338888 GNAI2P04899 355 aa24.42■■□□□ 1.5
RUNX3-202ENST00000338888 HSPA4P34932 840 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms