RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 CASKIN1Q8WXD9 1431 aa19.48■□□□□ 0.71
SATB1-201ENST00000338745 EXOC6BQ9Y2D4 811 aa19.48■□□□□ 0.71
SATB1-201ENST00000338745 GBP3Q9H0R5 595 aa19.48■□□□□ 0.71
SATB1-201ENST00000338745 EHBP1L1Q8N3D4 1523 aa19.48■□□□□ 0.71
SATB1-201ENST00000338745 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 SSFA2P28290 1259 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 NUP88Q99567 741 aaPredicted RBP19.47■□□□□ 0.71
SATB1-201ENST00000338745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.47■□□□□ 0.71
SATB1-201ENST00000338745 PRKCSHP14314 528 aaPredicted RBP19.47■□□□□ 0.71
SATB1-201ENST00000338745 IFFO1Q0D2I5 559 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 ANO10Q9NW15 660 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 KIF4BQ2VIQ3 1234 aa19.47■□□□□ 0.71
SATB1-201ENST00000338745 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
SATB1-201ENST00000338745 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
SATB1-201ENST00000338745 IDH1O75874 414 aaKnown RBP19.46■□□□□ 0.71
SATB1-201ENST00000338745 CKAP2LQ8IYA6 745 aa19.46■□□□□ 0.71
SATB1-201ENST00000338745 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
SATB1-201ENST00000338745 ZNF530Q6P9A1 599 aaPredicted RBP19.46■□□□□ 0.7
SATB1-201ENST00000338745 ZSCAN29Q8IWY8 852 aaPredicted RBP19.46■□□□□ 0.7
SATB1-201ENST00000338745 ZHX1Q9UKY1 873 aaPredicted RBP19.46■□□□□ 0.7
SATB1-201ENST00000338745 CPLX3Q8WVH0 158 aa19.45■□□□□ 0.7
SATB1-201ENST00000338745 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.45■□□□□ 0.7
SATB1-201ENST00000338745 DESP17661 470 aa19.45■□□□□ 0.7
SATB1-201ENST00000338745 MCM3P25205 808 aa19.45■□□□□ 0.7
SATB1-201ENST00000338745 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
SATB1-201ENST00000338745 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
SATB1-201ENST00000338745 CACNA2D4Q7Z3S7 1137 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 FKBP15Q5T1M5 1219 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 AIDAQ96BJ3 306 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 USP25Q9UHP3 1055 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
SATB1-201ENST00000338745 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
SATB1-201ENST00000338745 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 SLFN5Q08AF3 891 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 TSG101Q99816 390 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 NF2P35240 595 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 SPG7Q9UQ90 795 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 GTF2F1P35269 517 aaKnown RBP eCLIP19.44■□□□□ 0.7
SATB1-201ENST00000338745 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
SATB1-201ENST00000338745 LUZP1Q86V48 1076 aa19.43■□□□□ 0.7
SATB1-201ENST00000338745 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
SATB1-201ENST00000338745 KIF2AO00139 706 aaPredicted RBP19.43■□□□□ 0.7
SATB1-201ENST00000338745 TOM1L2Q6ZVM7 507 aa19.43■□□□□ 0.7
SATB1-201ENST00000338745 CTNNBL1Q8WYA6 563 aaPredicted RBP19.43■□□□□ 0.7
SATB1-201ENST00000338745 NKTRP30414 1462 aaKnown RBP19.43■□□□□ 0.7
SATB1-201ENST00000338745 ADCY5O95622 1261 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 SEC63Q9UGP8 760 aaKnown RBP19.42■□□□□ 0.7
SATB1-201ENST00000338745 UBA5Q9GZZ9 404 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 ISM2Q6H9L7 571 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 TMC6Q7Z403 805 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 MX1P20591 662 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 CCDC97Q96F63 343 aaPredicted RBP19.42■□□□□ 0.7
SATB1-201ENST00000338745 RBM25P49756 843 aaKnown RBP19.42■□□□□ 0.7
SATB1-201ENST00000338745 ANAPC15P60006 121 aa19.42■□□□□ 0.7
SATB1-201ENST00000338745 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 C9orf84Q5VXU9 1444 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 CALCOCO1Q9P1Z2 691 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 GDPD2Q9HCC8 539 aa19.41■□□□□ 0.7
SATB1-201ENST00000338745 POTEJP0CG39 1038 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 RTEL1-TNFRSF6BF6WH68 1400 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
SATB1-201ENST00000338745 MYZAPP0CAP1 466 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 CEP63Q96MT8 703 aa19.4■□□□□ 0.7
SATB1-201ENST00000338745 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
SATB1-201ENST00000338745 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
SATB1-201ENST00000338745 CCT2P78371 535 aaKnown RBP19.39■□□□□ 0.7
SATB1-201ENST00000338745 C8orf76Q96K31 380 aa19.39■□□□□ 0.7
SATB1-201ENST00000338745 MICALCLQ6ZW33 695 aa19.39■□□□□ 0.69
SATB1-201ENST00000338745 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.69
SATB1-201ENST00000338745 RAB11FIP3O75154 756 aa19.39■□□□□ 0.69
SATB1-201ENST00000338745 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
SATB1-201ENST00000338745 PPP1R12BO60237 982 aaPredicted RBP19.39■□□□□ 0.69
SATB1-201ENST00000338745 CNNM3Q8NE01 707 aa19.39■□□□□ 0.69
SATB1-201ENST00000338745 CEP135Q66GS9 1140 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 SSRP1Q08945 709 aaKnown RBP19.38■□□□□ 0.69
SATB1-201ENST00000338745 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 METTL24Q5JXM2 366 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 MCM10Q7L590 875 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 CCDC82Q8N4S0 544 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 TBC1D2Q9BYX2 928 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 ABCF2Q9UG63 623 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 BIN1O00499 593 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 IGF1RP08069 1367 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 GSTTP1A0A1W2PQM5 241 aa19.38■□□□□ 0.69
SATB1-201ENST00000338745 GJB2P29033 226 aa19.37■□□□□ 0.69
SATB1-201ENST00000338745 CCDC144CPQ8IYA2 1237 aa19.37■□□□□ 0.69
SATB1-201ENST00000338745 IPO4Q8TEX9 1081 aaKnown RBP19.37■□□□□ 0.69
SATB1-201ENST00000338745 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
SATB1-201ENST00000338745 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
SATB1-201ENST00000338745 LMAN1P49257 510 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms