RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
SLC28A1-202ENST00000338602 KCNQ4P56696 695 aa15.03■□□□□ -0
SLC28A1-202ENST00000338602 RTF1Q92541 710 aaKnown RBP15.03■□□□□ -0
SLC28A1-202ENST00000338602 SLC52A2Q9HAB3 445 aa15.03■□□□□ -0
SLC28A1-202ENST00000338602 LY75O60449 1722 aa15.03■□□□□ -0
SLC28A1-202ENST00000338602 MAP3K5Q99683 1374 aa15.03■□□□□ -0
SLC28A1-202ENST00000338602 ATP6V1AP38606 617 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 TEFQ10587 303 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 AKT1S1Q96B36 256 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 PHACTR3Q96KR7 559 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
SLC28A1-202ENST00000338602 LGR6Q9HBX8 967 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 SPON1Q9HCB6 807 aa15.02■□□□□ -0
SLC28A1-202ENST00000338602 MAPK8IP3Q9UPT6 1336 aa15.02□□□□□ -0.01
SLC28A1-202ENST00000338602 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
SLC28A1-202ENST00000338602 AK7Q96M32 723 aa15.01□□□□□ -0.01
SLC28A1-202ENST00000338602 ANP32CO43423 234 aa15□□□□□ -0.01
SLC28A1-202ENST00000338602 ZNF827Q17R98 1081 aa15□□□□□ -0.01
SLC28A1-202ENST00000338602 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
SLC28A1-202ENST00000338602 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
SLC28A1-202ENST00000338602 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
SLC28A1-202ENST00000338602 UTRNP46939 3433 aa14.99□□□□□ -0.01
SLC28A1-202ENST00000338602 SCN11AQ9UI33 1791 aa14.99□□□□□ -0.01
SLC28A1-202ENST00000338602 MSH5O43196 834 aa14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 SLC16A10Q8TF71 515 aa14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 MTFR1LQ9H019 292 aa14.98□□□□□ -0.01
SLC28A1-202ENST00000338602 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
SLC28A1-202ENST00000338602 ITPK1Q13572 414 aa14.96□□□□□ -0.02
SLC28A1-202ENST00000338602 NFE2L2Q16236 605 aa14.96□□□□□ -0.02
SLC28A1-202ENST00000338602 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.02
SLC28A1-202ENST00000338602 MRC1P22897 1456 aa14.96□□□□□ -0.02
SLC28A1-202ENST00000338602 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
SLC28A1-202ENST00000338602 C5P01031 1676 aa14.95□□□□□ -0.02
SLC28A1-202ENST00000338602 LINC00116Q8NCU8 138 aa14.95□□□□□ -0.02
SLC28A1-202ENST00000338602 PDGFDQ9GZP0 370 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-202ENST00000338602 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-202ENST00000338602 BTBD11A6QL63 1104 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 GNPATO15228 680 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 SSFA2P28290 1259 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 SLC39A6Q13433 755 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 RC3H1Q5TC82 1133 aaKnown RBP14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 ADAMTS7Q9UKP4 1686 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 CEMIPQ8WUJ3 1361 aa14.94□□□□□ -0.02
SLC28A1-202ENST00000338602 CASZ1Q86V15 1759 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 POLD1P28340 1107 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 LMOD3Q0VAK6 560 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 MCM10Q7L590 875 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 VSIG10Q8N0Z9 540 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 RTCBQ9Y3I0 505 aaKnown RBP14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 C4BP0C0L5 1744 aa14.93□□□□□ -0.02
SLC28A1-202ENST00000338602 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 PHF14O94880 888 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 ZNF790Q6PG37 636 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 COL23A1Q86Y22 540 aaPredicted RBP14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 RUNDC1Q96C34 613 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 SLC4A9Q96Q91 983 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 TAF1LQ8IZX4 1826 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
SLC28A1-202ENST00000338602 ZNF831Q5JPB2 1677 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 CEP350Q5VT06 3117 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 RIPK4P57078 832 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 TRAPPC3LQ5T215 181 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 FMNL2Q96PY5 1086 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 VIRMAQ69YN4 1812 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-202ENST00000338602 STARD3NLO95772 234 aa14.9□□□□□ -0.02
SLC28A1-202ENST00000338602 ADRA2BP18089 450 aa14.9□□□□□ -0.02
SLC28A1-202ENST00000338602 DCTN1Q14203 1278 aa14.9□□□□□ -0.02
SLC28A1-202ENST00000338602 RPS6KA4O75676 772 aa14.89□□□□□ -0.03
SLC28A1-202ENST00000338602 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
SLC28A1-202ENST00000338602 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
SLC28A1-202ENST00000338602 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
SLC28A1-202ENST00000338602 PTGER2P43116 358 aa14.88□□□□□ -0.03
SLC28A1-202ENST00000338602 CRKLP46109 303 aaKnown RBP14.88□□□□□ -0.03
SLC28A1-202ENST00000338602 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
SLC28A1-202ENST00000338602 ARXQ96QS3 562 aa14.88□□□□□ -0.03
SLC28A1-202ENST00000338602 RFC4P35249 363 aa14.87□□□□□ -0.03
SLC28A1-202ENST00000338602 MRS2Q9HD23 443 aa14.87□□□□□ -0.03
SLC28A1-202ENST00000338602 CCDC87Q9NVE4 849 aa14.87□□□□□ -0.03
SLC28A1-202ENST00000338602 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
SLC28A1-202ENST00000338602 CYP19A1P11511 503 aaPredicted RBP14.86□□□□□ -0.03
SLC28A1-202ENST00000338602 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
SLC28A1-202ENST00000338602 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-202ENST00000338602 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
SLC28A1-202ENST00000338602 TUBGCP6Q96RT7 1819 aa14.86□□□□□ -0.03
SLC28A1-202ENST00000338602 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 SGIP1Q9BQI5 828 aa14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 UBR3Q6ZT12 1888 aa14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 SIPA1L3O60292 1781 aaPredicted RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 SNRPA1P09661 255 aaKnown RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
SLC28A1-202ENST00000338602 NLGN1Q8N2Q7 840 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms