RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 TRIM6-TRIM34B2RNG4 842 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 HMMRO75330 724 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 PDE1AP54750 535 aa18.3■□□□□ 0.52
UBA1-201ENST00000335972 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
UBA1-201ENST00000335972 KDRP35968 1356 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 PSME1Q06323 249 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
UBA1-201ENST00000335972 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 TAF7Q15545 349 aaPredicted RBP18.29■□□□□ 0.52
UBA1-201ENST00000335972 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
UBA1-201ENST00000335972 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
UBA1-201ENST00000335972 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
UBA1-201ENST00000335972 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
UBA1-201ENST00000335972 DDX11L8A8MPP1 907 aa18.27■□□□□ 0.51
UBA1-201ENST00000335972 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.51
UBA1-201ENST00000335972 CASC1Q6TDU7 716 aa18.27■□□□□ 0.51
UBA1-201ENST00000335972 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.51
UBA1-201ENST00000335972 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
UBA1-201ENST00000335972 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
UBA1-201ENST00000335972 GBP4Q96PP9 640 aa18.26■□□□□ 0.51
UBA1-201ENST00000335972 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
UBA1-201ENST00000335972 USP44Q9H0E7 712 aa18.26■□□□□ 0.51
UBA1-201ENST00000335972 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
UBA1-201ENST00000335972 RABEP1Q15276 862 aa18.25■□□□□ 0.51
UBA1-201ENST00000335972 GAS2L3Q86XJ1 694 aa18.25■□□□□ 0.51
UBA1-201ENST00000335972 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
UBA1-201ENST00000335972 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
UBA1-201ENST00000335972 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
UBA1-201ENST00000335972 ERC2O15083 957 aa18.24■□□□□ 0.51
UBA1-201ENST00000335972 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
UBA1-201ENST00000335972 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
UBA1-201ENST00000335972 PALD1Q9ULE6 856 aa18.24■□□□□ 0.51
UBA1-201ENST00000335972 ARHGAP23Q9P227 1491 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 DTNBO60941 627 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 MX1P20591 662 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 MCTP1Q6DN14 999 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
UBA1-201ENST00000335972 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
UBA1-201ENST00000335972 FOXD4L6Q3SYB3 417 aaPredicted RBP18.23■□□□□ 0.51
UBA1-201ENST00000335972 FOXD4L3Q6VB84 417 aaPredicted RBP18.23■□□□□ 0.51
UBA1-201ENST00000335972 FSD2A1L4K1 749 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
UBA1-201ENST00000335972 GNAI3P08754 354 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
UBA1-201ENST00000335972 NEK4P51957 841 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 IL25Q9H293 177 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 SLIT1O75093 1534 aa18.22■□□□□ 0.51
UBA1-201ENST00000335972 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
UBA1-201ENST00000335972 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
UBA1-201ENST00000335972 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
UBA1-201ENST00000335972 BAG4O95429 457 aaKnown RBP18.21■□□□□ 0.51
UBA1-201ENST00000335972 TPRNQ4KMQ1 711 aa18.21■□□□□ 0.51
UBA1-201ENST00000335972 REC8O95072 547 aa18.2■□□□□ 0.5
UBA1-201ENST00000335972 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
UBA1-201ENST00000335972 TEFQ10587 303 aa18.2■□□□□ 0.5
UBA1-201ENST00000335972 IP6K1Q92551 441 aa18.2■□□□□ 0.5
UBA1-201ENST00000335972 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
UBA1-201ENST00000335972 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
UBA1-201ENST00000335972 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
UBA1-201ENST00000335972 GRPEL1Q9HAV7 217 aa18.19■□□□□ 0.5
UBA1-201ENST00000335972 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
UBA1-201ENST00000335972 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
UBA1-201ENST00000335972 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
UBA1-201ENST00000335972 ST18O60284 1047 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 NWD1Q149M9 1564 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
UBA1-201ENST00000335972 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
UBA1-201ENST00000335972 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
UBA1-201ENST00000335972 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
UBA1-201ENST00000335972 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
UBA1-201ENST00000335972 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
UBA1-201ENST00000335972 CHMLP26374 656 aa18.16■□□□□ 0.5
UBA1-201ENST00000335972 IBTKQ9P2D0 1353 aaPredicted RBP18.16■□□□□ 0.5
UBA1-201ENST00000335972 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
UBA1-201ENST00000335972 AXIN2Q9Y2T1 843 aa18.15■□□□□ 0.5
UBA1-201ENST00000335972 EIF5BO60841 1220 aaKnown RBP18.15■□□□□ 0.5
UBA1-201ENST00000335972 SALL3Q9BXA9 1300 aa18.15■□□□□ 0.5
UBA1-201ENST00000335972 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
UBA1-201ENST00000335972 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
UBA1-201ENST00000335972 GCP02774 474 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.49
UBA1-201ENST00000335972 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
UBA1-201ENST00000335972 PA2G4Q9UQ80 394 aaKnown RBP18.14■□□□□ 0.49
UBA1-201ENST00000335972 CAVIN1Q6NZI2 390 aaKnown RBP18.14■□□□□ 0.49
UBA1-201ENST00000335972 FAM43AQ8N2R8 423 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 GOLGA6L22H0YM25 854 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 MRE11P49959 708 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 DNAAF4Q8WXU2 420 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
UBA1-201ENST00000335972 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms