RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 CDCA7LQ96GN5 454 aa24.41■■□□□ 1.5
TSSC4-201ENST00000333256 KAT6BQ8WYB5 2073 aa24.41■■□□□ 1.5
TSSC4-201ENST00000333256 BCL9O00512 1426 aa24.41■■□□□ 1.5
TSSC4-201ENST00000333256 MRC1P22897 1456 aa24.4■■□□□ 1.5
TSSC4-201ENST00000333256 TAF7Q15545 349 aaPredicted RBP24.4■■□□□ 1.5
TSSC4-201ENST00000333256 GOLGA2Q08379 1002 aa24.4■■□□□ 1.5
TSSC4-201ENST00000333256 TRIM37O94972 964 aa24.39■■□□□ 1.49
TSSC4-201ENST00000333256 CALD1Q05682 793 aaKnown RBP24.39■■□□□ 1.49
TSSC4-201ENST00000333256 SLC39A6Q13433 755 aa24.39■■□□□ 1.49
TSSC4-201ENST00000333256 BTBD11A6QL63 1104 aa24.38■■□□□ 1.49
TSSC4-201ENST00000333256 TSR2Q969E8 191 aaKnown RBP24.37■■□□□ 1.49
TSSC4-201ENST00000333256 CFAP44Q96MT7 982 aa24.37■■□□□ 1.49
TSSC4-201ENST00000333256 IFT57Q9NWB7 429 aa24.37■■□□□ 1.49
TSSC4-201ENST00000333256 TSPYL4Q9UJ04 414 aa24.37■■□□□ 1.49
TSSC4-201ENST00000333256 ITGB4P16144 1822 aa24.36■■□□□ 1.49
TSSC4-201ENST00000333256 KCNQ3O43525 872 aa24.36■■□□□ 1.49
TSSC4-201ENST00000333256 GNAI1P63096 354 aa24.36■■□□□ 1.49
TSSC4-201ENST00000333256 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
TSSC4-201ENST00000333256 IL16Q14005 1332 aa24.35■■□□□ 1.49
TSSC4-201ENST00000333256 CHL1O00533 1208 aa24.35■■□□□ 1.49
TSSC4-201ENST00000333256 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
TSSC4-201ENST00000333256 MBIPQ9NS73 344 aa24.35■■□□□ 1.49
TSSC4-201ENST00000333256 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
TSSC4-201ENST00000333256 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
TSSC4-201ENST00000333256 BCL11BQ9C0K0 894 aaPredicted RBP24.34■■□□□ 1.49
TSSC4-201ENST00000333256 SBF2Q86WG5 1849 aa24.33■■□□□ 1.49
TSSC4-201ENST00000333256 SLFN5Q08AF3 891 aa24.33■■□□□ 1.49
TSSC4-201ENST00000333256 ATG3Q9NT62 314 aa24.33■■□□□ 1.49
TSSC4-201ENST00000333256 ZNF790Q6PG37 636 aa24.32■■□□□ 1.48
TSSC4-201ENST00000333256 FANCIQ9NVI1 1328 aa24.32■■□□□ 1.48
TSSC4-201ENST00000333256 E9PSI1 815 aa24.31■■□□□ 1.48
TSSC4-201ENST00000333256 ILDR2Q71H61 639 aa24.31■■□□□ 1.48
TSSC4-201ENST00000333256 PTCD1O75127 700 aaKnown RBP24.3■■□□□ 1.48
TSSC4-201ENST00000333256 TTC5Q8N0Z6 440 aa24.3■■□□□ 1.48
TSSC4-201ENST00000333256 MYH16Q9H6N6 1097 aa24.3■■□□□ 1.48
TSSC4-201ENST00000333256 KRT24Q2M2I5 525 aa24.29■■□□□ 1.48
TSSC4-201ENST00000333256 BABAM1Q9NWV8 329 aa24.28■■□□□ 1.48
TSSC4-201ENST00000333256 BTAF1O14981 1849 aa24.28■■□□□ 1.48
TSSC4-201ENST00000333256 ZNF496Q96IT1 587 aaPredicted RBP24.27■■□□□ 1.48
TSSC4-201ENST00000333256 DUSP27Q5VZP5 1158 aa24.27■■□□□ 1.48
TSSC4-201ENST00000333256 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
TSSC4-201ENST00000333256 PALLDQ8WX93 1383 aa24.27■■□□□ 1.48
TSSC4-201ENST00000333256 KDM3BQ7LBC6 1761 aa24.26■■□□□ 1.47
TSSC4-201ENST00000333256 EIF4A1P60842 406 aaKnown RBP24.26■■□□□ 1.47
TSSC4-201ENST00000333256 TRMT2AQ8IZ69 625 aaKnown RBP24.26■■□□□ 1.47
TSSC4-201ENST00000333256 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
TSSC4-201ENST00000333256 APBA3O96018 575 aa24.25■■□□□ 1.47
TSSC4-201ENST00000333256 PAPPAQ13219 1627 aa24.25■■□□□ 1.47
TSSC4-201ENST00000333256 EXOSC9Q06265 439 aaKnown RBP24.24■■□□□ 1.47
TSSC4-201ENST00000333256 KCPQ6ZWJ8 1503 aa24.23■■□□□ 1.47
TSSC4-201ENST00000333256 KCNQ4P56696 695 aa24.23■■□□□ 1.47
TSSC4-201ENST00000333256 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
TSSC4-201ENST00000333256 SMARCC1Q92922 1105 aaPredicted RBP24.23■■□□□ 1.47
TSSC4-201ENST00000333256 PRAMEF22A3QJZ6 481 aa24.22■■□□□ 1.47
TSSC4-201ENST00000333256 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
TSSC4-201ENST00000333256 FMNL2Q96PY5 1086 aa24.22■■□□□ 1.47
TSSC4-201ENST00000333256 SLC4A9Q96Q91 983 aa24.21■■□□□ 1.47
TSSC4-201ENST00000333256 LOC102724428A0A0B4J2F2 783 aa24.2■■□□□ 1.46
TSSC4-201ENST00000333256 SIK1P57059 783 aa24.2■■□□□ 1.46
TSSC4-201ENST00000333256 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
TSSC4-201ENST00000333256 UBR2Q8IWV8 1755 aa24.19■■□□□ 1.46
TSSC4-201ENST00000333256 HEG1Q9ULI3 1381 aa24.19■■□□□ 1.46
TSSC4-201ENST00000333256 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
TSSC4-201ENST00000333256 GIGYF1O75420 1035 aaPredicted RBP24.18■■□□□ 1.46
TSSC4-201ENST00000333256 ATP6V1AP38606 617 aa24.18■■□□□ 1.46
TSSC4-201ENST00000333256 TWISTNBQ3B726 338 aaPredicted RBP24.17■■□□□ 1.46
TSSC4-201ENST00000333256 SNRPA1P09661 255 aaKnown RBP24.16■■□□□ 1.46
TSSC4-201ENST00000333256 EN1Q05925 392 aaPredicted RBP24.16■■□□□ 1.46
TSSC4-201ENST00000333256 DEFB132Q7Z7B7 95 aa24.16■■□□□ 1.46
TSSC4-201ENST00000333256 DNAJC10Q8IXB1 793 aa24.16■■□□□ 1.46
TSSC4-201ENST00000333256 NECTIN2Q92692 538 aa24.16■■□□□ 1.46
TSSC4-201ENST00000333256 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
TSSC4-201ENST00000333256 ITPK1Q13572 414 aa24.15■■□□□ 1.46
TSSC4-201ENST00000333256 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
TSSC4-201ENST00000333256 PLSCR1O15162 318 aa24.15■■□□□ 1.46
TSSC4-201ENST00000333256 EIF2S2P20042 333 aaKnown RBP24.14■■□□□ 1.45
TSSC4-201ENST00000333256 TXNRD1Q16881 649 aa24.14■■□□□ 1.45
TSSC4-201ENST00000333256 PROM2Q8N271 834 aa24.14■■□□□ 1.45
TSSC4-201ENST00000333256 UPF1Q92900 1129 aaKnown RBP eCLIP24.14■■□□□ 1.45
TSSC4-201ENST00000333256 LRRC4BQ9NT99 713 aa24.14■■□□□ 1.45
TSSC4-201ENST00000333256 VSIG10Q8N0Z9 540 aa24.13■■□□□ 1.45
TSSC4-201ENST00000333256 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
TSSC4-201ENST00000333256 VAMP4O75379 141 aa24.12■■□□□ 1.45
TSSC4-201ENST00000333256 C5P01031 1676 aa24.12■■□□□ 1.45
TSSC4-201ENST00000333256 BAG6P46379 1132 aa24.11■■□□□ 1.45
TSSC4-201ENST00000333256 EZH2Q15910 746 aaKnown RBP24.11■■□□□ 1.45
TSSC4-201ENST00000333256 LY75O60449 1722 aa24.11■■□□□ 1.45
TSSC4-201ENST00000333256 CCDC125Q86Z20 511 aa24.11■■□□□ 1.45
TSSC4-201ENST00000333256 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
TSSC4-201ENST00000333256 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
TSSC4-201ENST00000333256 PIP4K2AP48426 406 aaPredicted RBP24.09■■□□□ 1.45
TSSC4-201ENST00000333256 LINC00116Q8NCU8 138 aa24.09■■□□□ 1.45
TSSC4-201ENST00000333256 TJP1Q07157 1748 aa24.09■■□□□ 1.45
TSSC4-201ENST00000333256 HOXB7P09629 217 aa24.08■■□□□ 1.45
TSSC4-201ENST00000333256 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.44
TSSC4-201ENST00000333256 SLC27A3Q5K4L6 730 aa24.08■■□□□ 1.44
TSSC4-201ENST00000333256 A1BGP04217 495 aa24.07■■□□□ 1.44
TSSC4-201ENST00000333256 TEX13AQ9BXU3 409 aaPredicted RBP24.07■■□□□ 1.44
TSSC4-201ENST00000333256 STARD3NLO95772 234 aa24.06■■□□□ 1.44
TSSC4-201ENST00000333256 BCL2L13Q9BXK5 485 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms