RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
LCK-201ENST00000333070 IL17REQ8NFR9 667 aa20.56■□□□□ 0.88
LCK-201ENST00000333070 MED1Q15648 1581 aaPredicted RBP20.56■□□□□ 0.88
LCK-201ENST00000333070 HDAC1Q13547 482 aaPredicted RBP20.55■□□□□ 0.88
LCK-201ENST00000333070 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
LCK-201ENST00000333070 API5Q9BZZ5 524 aaKnown RBP20.55■□□□□ 0.88
LCK-201ENST00000333070 LRRC59Q96AG4 307 aaKnown RBP20.54■□□□□ 0.88
LCK-201ENST00000333070 DDX17Q92841 729 aaKnown RBP20.53■□□□□ 0.88
LCK-201ENST00000333070 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
LCK-201ENST00000333070 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
LCK-201ENST00000333070 DDIT3P35638 169 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 AXIN2Q9Y2T1 843 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 CAMTA1Q9Y6Y1 1673 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
LCK-201ENST00000333070 SKOR2Q2VWA4 1001 aaPredicted RBP20.51■□□□□ 0.87
LCK-201ENST00000333070 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
LCK-201ENST00000333070 PXDNQ92626 1479 aa20.51■□□□□ 0.87
LCK-201ENST00000333070 PTMSP20962 102 aa20.51■□□□□ 0.87
LCK-201ENST00000333070 CEMIPQ8WUJ3 1361 aa20.5■□□□□ 0.87
LCK-201ENST00000333070 RGPD5Q99666 1765 aa20.5■□□□□ 0.87
LCK-201ENST00000333070 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
LCK-201ENST00000333070 RGS12O14924 1447 aa20.49■□□□□ 0.87
LCK-201ENST00000333070 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
LCK-201ENST00000333070 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
LCK-201ENST00000333070 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
LCK-201ENST00000333070 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
LCK-201ENST00000333070 ZC3H6P61129 1189 aaKnown RBP20.48■□□□□ 0.87
LCK-201ENST00000333070 SMC5Q8IY18 1101 aa20.48■□□□□ 0.87
LCK-201ENST00000333070 PTPRCP08575 1304 aa20.47■□□□□ 0.87
LCK-201ENST00000333070 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
LCK-201ENST00000333070 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
LCK-201ENST00000333070 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
LCK-201ENST00000333070 GAS2L3Q86XJ1 694 aa20.47■□□□□ 0.87
LCK-201ENST00000333070 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
LCK-201ENST00000333070 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
LCK-201ENST00000333070 SNX21Q969T3 373 aa20.46■□□□□ 0.87
LCK-201ENST00000333070 COL18A1P39060 1754 aa20.46■□□□□ 0.87
LCK-201ENST00000333070 ERBB3P21860 1342 aa20.46■□□□□ 0.87
LCK-201ENST00000333070 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
LCK-201ENST00000333070 ZNF335Q9H4Z2 1342 aaPredicted RBP20.46■□□□□ 0.87
LCK-201ENST00000333070 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 BRINP3Q76B58 766 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 TERF1P54274 439 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 CCDC173Q0VFZ6 552 aa20.45■□□□□ 0.86
LCK-201ENST00000333070 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
LCK-201ENST00000333070 KIAA1211Q6ZU35 1233 aa20.44■□□□□ 0.86
LCK-201ENST00000333070 PPP1R9BQ96SB3 815 aa20.44■□□□□ 0.86
LCK-201ENST00000333070 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
LCK-201ENST00000333070 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
LCK-201ENST00000333070 ABCC6O95255 1503 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 OFD1O75665 1012 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 RBM25P49756 843 aaKnown RBP20.42■□□□□ 0.86
LCK-201ENST00000333070 RAB3GAP1Q15042 981 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 ZSCAN30Q86W11 494 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 CABLES1Q8TDN4 633 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 CACNA1FO60840 1977 aa20.42■□□□□ 0.86
LCK-201ENST00000333070 G2E3Q7L622 706 aa20.41■□□□□ 0.86
LCK-201ENST00000333070 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
LCK-201ENST00000333070 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
LCK-201ENST00000333070 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
LCK-201ENST00000333070 CCDC30Q5VVM6 783 aa20.4■□□□□ 0.86
LCK-201ENST00000333070 C1orf115Q9H7X2 142 aa20.4■□□□□ 0.86
LCK-201ENST00000333070 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
LCK-201ENST00000333070 CPDO75976 1380 aa20.39■□□□□ 0.85
LCK-201ENST00000333070 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.85
LCK-201ENST00000333070 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
LCK-201ENST00000333070 RNMTO43148 476 aaKnown RBP20.38■□□□□ 0.85
LCK-201ENST00000333070 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.38■□□□□ 0.85
LCK-201ENST00000333070 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
LCK-201ENST00000333070 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
LCK-201ENST00000333070 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
LCK-201ENST00000333070 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
LCK-201ENST00000333070 NUCB1Q02818 461 aa20.37■□□□□ 0.85
LCK-201ENST00000333070 ANP32BQ92688 251 aaKnown RBP20.37■□□□□ 0.85
LCK-201ENST00000333070 MAP7D2Q96T17 732 aa20.37■□□□□ 0.85
LCK-201ENST00000333070 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
LCK-201ENST00000333070 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
LCK-201ENST00000333070 IBTKQ9P2D0 1353 aaPredicted RBP20.36■□□□□ 0.85
LCK-201ENST00000333070 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
LCK-201ENST00000333070 TEFQ10587 303 aa20.35■□□□□ 0.85
LCK-201ENST00000333070 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
LCK-201ENST00000333070 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
LCK-201ENST00000333070 HOXB7P09629 217 aa20.34■□□□□ 0.85
LCK-201ENST00000333070 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
LCK-201ENST00000333070 FLIIQ13045 1269 aa20.34■□□□□ 0.85
LCK-201ENST00000333070 HS1BP3Q53T59 392 aa20.34■□□□□ 0.85
LCK-201ENST00000333070 BTBD11A6QL63 1104 aa20.33■□□□□ 0.85
LCK-201ENST00000333070 F6X3S4 739 aa20.33■□□□□ 0.85
LCK-201ENST00000333070 KCNQ3O43525 872 aa20.33■□□□□ 0.85
LCK-201ENST00000333070 SIPA1L3O60292 1781 aaPredicted RBP20.33■□□□□ 0.85
LCK-201ENST00000333070 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.85
LCK-201ENST00000333070 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.85
LCK-201ENST00000333070 CLEC17AQ6ZS10 378 aa20.33■□□□□ 0.85
LCK-201ENST00000333070 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.85
LCK-201ENST00000333070 PLEKHG2Q9H7P9 1386 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms