RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
C11orf88-201ENST00000332814 PAPPAQ13219 1627 aa21.69■■□□□ 1.06
C11orf88-201ENST00000332814 LOC102724428A0A0B4J2F2 783 aa21.69■■□□□ 1.06
C11orf88-201ENST00000332814 SIK1P57059 783 aa21.69■■□□□ 1.06
C11orf88-201ENST00000332814 RBM42Q9BTD8 480 aaKnown RBP21.69■■□□□ 1.06
C11orf88-201ENST00000332814 MRC1P22897 1456 aa21.69■■□□□ 1.06
C11orf88-201ENST00000332814 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
C11orf88-201ENST00000332814 TFCP2L1Q9NZI6 479 aa21.67■■□□□ 1.06
C11orf88-201ENST00000332814 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
C11orf88-201ENST00000332814 ZNF827Q17R98 1081 aa21.66■■□□□ 1.06
C11orf88-201ENST00000332814 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
C11orf88-201ENST00000332814 HTATSF1O43719 755 aaKnown RBP21.65■■□□□ 1.06
C11orf88-201ENST00000332814 TTC5Q8N0Z6 440 aa21.65■■□□□ 1.06
C11orf88-201ENST00000332814 C5P01031 1676 aa21.65■■□□□ 1.06
C11orf88-201ENST00000332814 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
C11orf88-201ENST00000332814 NFE2L2Q16236 605 aa21.64■■□□□ 1.05
C11orf88-201ENST00000332814 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
C11orf88-201ENST00000332814 AKT1S1Q96B36 256 aa21.64■■□□□ 1.05
C11orf88-201ENST00000332814 AK7Q96M32 723 aa21.64■■□□□ 1.05
C11orf88-201ENST00000332814 CCDC146Q8IYE0 955 aa21.63■■□□□ 1.05
C11orf88-201ENST00000332814 MCM10Q7L590 875 aa21.62■■□□□ 1.05
C11orf88-201ENST00000332814 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
C11orf88-201ENST00000332814 ADAMTS8Q9UP79 889 aa21.62■■□□□ 1.05
C11orf88-201ENST00000332814 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
C11orf88-201ENST00000332814 SLC39A6Q13433 755 aa21.61■■□□□ 1.05
C11orf88-201ENST00000332814 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
C11orf88-201ENST00000332814 VIRMAQ69YN4 1812 aaKnown RBP21.61■■□□□ 1.05
C11orf88-201ENST00000332814 MSH5O43196 834 aa21.6■■□□□ 1.05
C11orf88-201ENST00000332814 LMOD3Q0VAK6 560 aa21.6■■□□□ 1.05
C11orf88-201ENST00000332814 ITPK1Q13572 414 aa21.6■■□□□ 1.05
C11orf88-201ENST00000332814 LINC00116Q8NCU8 138 aa21.6■■□□□ 1.05
C11orf88-201ENST00000332814 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
C11orf88-201ENST00000332814 DCTN1Q14203 1278 aa21.59■■□□□ 1.05
C11orf88-201ENST00000332814 BTBD11A6QL63 1104 aa21.58■■□□□ 1.05
C11orf88-201ENST00000332814 RIPK4P57078 832 aa21.58■■□□□ 1.05
C11orf88-201ENST00000332814 SPON1Q9HCB6 807 aa21.58■■□□□ 1.05
C11orf88-201ENST00000332814 PNPLA7Q6ZV29 1317 aa21.57■■□□□ 1.04
C11orf88-201ENST00000332814 ZNF831Q5JPB2 1677 aa21.57■■□□□ 1.04
C11orf88-201ENST00000332814 CASZ1Q86V15 1759 aa21.57■■□□□ 1.04
C11orf88-201ENST00000332814 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
C11orf88-201ENST00000332814 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
C11orf88-201ENST00000332814 LRP5O75197 1615 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 GNPATO15228 680 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 ZBTB7AO95365 584 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
C11orf88-201ENST00000332814 PDGFDQ9GZP0 370 aaPredicted RBP21.56■■□□□ 1.04
C11orf88-201ENST00000332814 PHF14O94880 888 aa21.55■■□□□ 1.04
C11orf88-201ENST00000332814 TMPOP42166 694 aaKnown RBP21.55■■□□□ 1.04
C11orf88-201ENST00000332814 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
C11orf88-201ENST00000332814 QSER1Q2KHR3 1735 aa21.55■■□□□ 1.04
C11orf88-201ENST00000332814 SLC16A10Q8TF71 515 aa21.54■■□□□ 1.04
C11orf88-201ENST00000332814 MTFR1LQ9H019 292 aa21.54■■□□□ 1.04
C11orf88-201ENST00000332814 RRP7AQ9Y3A4 280 aaKnown RBP21.54■■□□□ 1.04
C11orf88-201ENST00000332814 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
C11orf88-201ENST00000332814 CNTNAP4Q9C0A0 1308 aa21.54■■□□□ 1.04
C11orf88-201ENST00000332814 TAF7Q15545 349 aaPredicted RBP21.53■■□□□ 1.04
C11orf88-201ENST00000332814 VSIG10Q8N0Z9 540 aa21.53■■□□□ 1.04
C11orf88-201ENST00000332814 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
C11orf88-201ENST00000332814 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
C11orf88-201ENST00000332814 PPP1R1BQ9UD71 204 aaPredicted RBP21.53■■□□□ 1.04
C11orf88-201ENST00000332814 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
C11orf88-201ENST00000332814 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
C11orf88-201ENST00000332814 SSFA2P28290 1259 aa21.52■■□□□ 1.04
C11orf88-201ENST00000332814 DNAJC10Q8IXB1 793 aa21.52■■□□□ 1.04
C11orf88-201ENST00000332814 ATF5Q9Y2D1 282 aaPredicted RBP21.52■■□□□ 1.04
C11orf88-201ENST00000332814 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
C11orf88-201ENST00000332814 TUBGCP6Q96RT7 1819 aa21.51■■□□□ 1.03
C11orf88-201ENST00000332814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 RC3H1Q5TC82 1133 aaKnown RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 COL23A1Q86Y22 540 aaPredicted RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 ZNF496Q96IT1 587 aaPredicted RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 TJP1Q07157 1748 aa21.51■■□□□ 1.03
C11orf88-201ENST00000332814 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
C11orf88-201ENST00000332814 HEG1Q9ULI3 1381 aa21.5■■□□□ 1.03
C11orf88-201ENST00000332814 COL5A3P25940 1745 aaPredicted RBP21.5■■□□□ 1.03
C11orf88-201ENST00000332814 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
C11orf88-201ENST00000332814 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
C11orf88-201ENST00000332814 POLD1P28340 1107 aa21.49■■□□□ 1.03
C11orf88-201ENST00000332814 TEX13AQ9BXU3 409 aaPredicted RBP21.49■■□□□ 1.03
C11orf88-201ENST00000332814 STARD3NLO95772 234 aa21.48■■□□□ 1.03
C11orf88-201ENST00000332814 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
C11orf88-201ENST00000332814 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
C11orf88-201ENST00000332814 APAF1O14727 1248 aa21.47■■□□□ 1.03
C11orf88-201ENST00000332814 KCNQ3O43525 872 aa21.47■■□□□ 1.03
C11orf88-201ENST00000332814 RPS6KA4O75676 772 aa21.47■■□□□ 1.03
C11orf88-201ENST00000332814 ADRA2BP18089 450 aa21.47■■□□□ 1.03
C11orf88-201ENST00000332814 UBR3Q6ZT12 1888 aa21.46■■□□□ 1.03
C11orf88-201ENST00000332814 MIS18AQ9NYP9 233 aa21.46■■□□□ 1.03
C11orf88-201ENST00000332814 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
C11orf88-201ENST00000332814 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
C11orf88-201ENST00000332814 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
C11orf88-201ENST00000332814 RFC4P35249 363 aa21.44■■□□□ 1.02
C11orf88-201ENST00000332814 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
C11orf88-201ENST00000332814 NPM2Q86SE8 214 aaKnown RBP21.44■■□□□ 1.02
C11orf88-201ENST00000332814 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
C11orf88-201ENST00000332814 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
C11orf88-201ENST00000332814 MSL1Q68DK7 614 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms