RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TUBGCP6Q96RT7 1819 aa36.97■■■■□ 3.51
ATPAF1-201ENST00000329231 FLAD1Q8NFF5 587 aa36.97■■■■□ 3.51
ATPAF1-201ENST00000329231 RNMTO43148 476 aaKnown RBP36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 U2AF1L5P0DN76 240 aaPredicted RBP36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 U2AF1Q01081 240 aaKnown RBP eCLIP36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 GAS2L2Q8NHY3 880 aa36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 SGIP1Q9BQI5 828 aa36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 RBM42Q9BTD8 480 aaKnown RBP36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 LGR6Q9HBX8 967 aa36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 C4BP0C0L5 1744 aa36.96■■■■□ 3.51
ATPAF1-201ENST00000329231 MSH5O43196 834 aa36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 ITPK1Q13572 414 aa36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 COL23A1Q86Y22 540 aaPredicted RBP36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 LINC00116Q8NCU8 138 aa36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 RSPH6AQ9H0K4 717 aa36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 SCN11AQ9UI33 1791 aa36.95■■■■□ 3.51
ATPAF1-201ENST00000329231 PRKAR2BP31323 418 aa36.94■■■■□ 3.5
ATPAF1-201ENST00000329231 SLC52A2Q9HAB3 445 aa36.94■■■■□ 3.5
ATPAF1-201ENST00000329231 RALBP1Q15311 655 aa36.92■■■■□ 3.5
ATPAF1-201ENST00000329231 FCHSD2O94868 740 aa36.9■■■■□ 3.5
ATPAF1-201ENST00000329231 POLD1P28340 1107 aa36.89■■■■□ 3.5
ATPAF1-201ENST00000329231 SLC4A9Q96Q91 983 aa36.89■■■■□ 3.5
ATPAF1-201ENST00000329231 GNAT3A8MTJ3 354 aa36.88■■■■□ 3.49
ATPAF1-201ENST00000329231 ARXQ96QS3 562 aa36.88■■■■□ 3.49
ATPAF1-201ENST00000329231 MAP3K5Q99683 1374 aa36.88■■■■□ 3.49
ATPAF1-201ENST00000329231 MRC1P22897 1456 aa36.88■■■■□ 3.49
ATPAF1-201ENST00000329231 PTCD1O75127 700 aaKnown RBP36.87■■■■□ 3.49
ATPAF1-201ENST00000329231 PHACTR3Q96KR7 559 aa36.87■■■■□ 3.49
ATPAF1-201ENST00000329231 ZNF831Q5JPB2 1677 aa36.86■■■■□ 3.49
ATPAF1-201ENST00000329231 SSFA2P28290 1259 aa36.85■■■■□ 3.49
ATPAF1-201ENST00000329231 ADAMTS7Q9UKP4 1686 aa36.84■■■■□ 3.49
ATPAF1-201ENST00000329231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.84■■■■□ 3.49
ATPAF1-201ENST00000329231 GNPATO15228 680 aa36.84■■■■□ 3.49
ATPAF1-201ENST00000329231 PHF14O94880 888 aa36.84■■■■□ 3.49
ATPAF1-201ENST00000329231 AMIGO3Q86WK7 504 aa36.83■■■■□ 3.49
ATPAF1-201ENST00000329231 FHDC1Q9C0D6 1143 aaPredicted RBP36.82■■■■□ 3.48
ATPAF1-201ENST00000329231 RC3H1Q5TC82 1133 aaKnown RBP36.81■■■■□ 3.48
ATPAF1-201ENST00000329231 UBR3Q6ZT12 1888 aa36.81■■■■□ 3.48
ATPAF1-201ENST00000329231 COL24A1Q17RW2 1714 aa36.79■■■■□ 3.48
ATPAF1-201ENST00000329231 IL17REQ8NFR9 667 aa36.79■■■■□ 3.48
ATPAF1-201ENST00000329231 CNTNAP4Q9C0A0 1308 aa36.79■■■■□ 3.48
ATPAF1-201ENST00000329231 VIRMAQ69YN4 1812 aaKnown RBP36.78■■■■□ 3.48
ATPAF1-201ENST00000329231 TEFQ10587 303 aa36.78■■■■□ 3.48
ATPAF1-201ENST00000329231 SMIM5Q71RC9 77 aa36.78■■■■□ 3.48
ATPAF1-201ENST00000329231 SYT17Q9BSW7 474 aa36.78■■■■□ 3.48
ATPAF1-201ENST00000329231 SLC39A6Q13433 755 aa36.77■■■■□ 3.48
ATPAF1-201ENST00000329231 MSL1Q68DK7 614 aa36.77■■■■□ 3.48
ATPAF1-201ENST00000329231 RTCBQ9Y3I0 505 aaKnown RBP36.77■■■■□ 3.48
ATPAF1-201ENST00000329231 NEFMP07197 916 aa36.75■■■■□ 3.47
ATPAF1-201ENST00000329231 DCAF8L1A6NGE4 600 aa36.74■■■■□ 3.47
ATPAF1-201ENST00000329231 MYBBP1AQ9BQG0 1328 aaKnown RBP36.74■■■■□ 3.47
ATPAF1-201ENST00000329231 COL5A3P25940 1745 aaPredicted RBP36.73■■■■□ 3.47
ATPAF1-201ENST00000329231 TRAPPC3LQ5T215 181 aa36.72■■■■□ 3.47
ATPAF1-201ENST00000329231 TTC5Q8N0Z6 440 aa36.72■■■■□ 3.47
ATPAF1-201ENST00000329231 CEMIPQ8WUJ3 1361 aa36.72■■■■□ 3.47
ATPAF1-201ENST00000329231 RTF1Q92541 710 aaKnown RBP36.72■■■■□ 3.47
ATPAF1-201ENST00000329231 RPS6KA4O75676 772 aa36.71■■■■□ 3.47
ATPAF1-201ENST00000329231 ADRA2BP18089 450 aa36.71■■■■□ 3.47
ATPAF1-201ENST00000329231 PNNQ9H307 717 aaKnown RBP36.71■■■■□ 3.47
ATPAF1-201ENST00000329231 CRKLP46109 303 aaKnown RBP36.7■■■■□ 3.47
ATPAF1-201ENST00000329231 CICQ96RK0 1608 aaPredicted RBP36.69■■■■□ 3.46
ATPAF1-201ENST00000329231 DNAJC10Q8IXB1 793 aa36.68■■■■□ 3.46
ATPAF1-201ENST00000329231 VSIG10Q8N0Z9 540 aa36.68■■■■□ 3.46
ATPAF1-201ENST00000329231 KLHL34Q8N239 644 aa36.68■■■■□ 3.46
ATPAF1-201ENST00000329231 KCPQ6ZWJ8 1503 aa36.68■■■■□ 3.46
ATPAF1-201ENST00000329231 HTATSF1O43719 755 aaKnown RBP36.67■■■■□ 3.46
ATPAF1-201ENST00000329231 TJP1Q07157 1748 aa36.67■■■■□ 3.46
ATPAF1-201ENST00000329231 ZNF790Q6PG37 636 aa36.65■■■■□ 3.46
ATPAF1-201ENST00000329231 ARHGEF1Q92888 912 aaKnown RBP36.65■■■■□ 3.46
ATPAF1-201ENST00000329231 PLEKHF1Q96S99 279 aa36.65■■■■□ 3.46
ATPAF1-201ENST00000329231 RFC4P35249 363 aa36.63■■■■□ 3.45
ATPAF1-201ENST00000329231 MCM10Q7L590 875 aa36.63■■■■□ 3.45
ATPAF1-201ENST00000329231 MYH14Q7Z406 1995 aaKnown RBP36.63■■■■□ 3.45
ATPAF1-201ENST00000329231 INTS5Q6P9B9 1019 aaKnown RBP36.62■■■■□ 3.45
ATPAF1-201ENST00000329231 PRKRIP1Q9H875 184 aaPredicted RBP36.62■■■■□ 3.45
ATPAF1-201ENST00000329231 CCDC87Q9NVE4 849 aa36.62■■■■□ 3.45
ATPAF1-201ENST00000329231 BTBD11A6QL63 1104 aa36.61■■■■□ 3.45
ATPAF1-201ENST00000329231 CYP19A1P11511 503 aaPredicted RBP36.61■■■■□ 3.45
ATPAF1-201ENST00000329231 SIPA1L3O60292 1781 aaPredicted RBP36.61■■■■□ 3.45
ATPAF1-201ENST00000329231 MAPK8IP3Q9UPT6 1336 aa36.6■■■■□ 3.45
ATPAF1-201ENST00000329231 UBR2Q8IWV8 1755 aa36.6■■■■□ 3.45
ATPAF1-201ENST00000329231 ZNF496Q96IT1 587 aaPredicted RBP36.59■■■■□ 3.45
ATPAF1-201ENST00000329231 DCTN1Q14203 1278 aa36.57■■■■□ 3.44
ATPAF1-201ENST00000329231 NFE2L2Q16236 605 aa36.57■■■■□ 3.44
ATPAF1-201ENST00000329231 NLGN1Q8N2Q7 840 aa36.57■■■■□ 3.44
ATPAF1-201ENST00000329231 FMNL2Q96PY5 1086 aa36.57■■■■□ 3.44
ATPAF1-201ENST00000329231 HEG1Q9ULI3 1381 aa36.56■■■■□ 3.44
ATPAF1-201ENST00000329231 TEX13AQ9BXU3 409 aaPredicted RBP36.56■■■■□ 3.44
ATPAF1-201ENST00000329231 STARD3NLO95772 234 aa36.55■■■■□ 3.44
ATPAF1-201ENST00000329231 ZNF316A6NFI3 1004 aaPredicted RBP36.54■■■■□ 3.44
ATPAF1-201ENST00000329231 CD2APQ9Y5K6 639 aa36.54■■■■□ 3.44
ATPAF1-201ENST00000329231 GYS1P13807 737 aa36.53■■■■□ 3.44
ATPAF1-201ENST00000329231 NLGN2Q8NFZ4 835 aa36.52■■■■□ 3.44
ATPAF1-201ENST00000329231 SOS1Q07889 1333 aaPredicted RBP36.52■■■■□ 3.44
ATPAF1-201ENST00000329231 KCNQ3O43525 872 aa36.51■■■■□ 3.44
ATPAF1-201ENST00000329231 MMP10P09238 476 aa36.51■■■■□ 3.44
ATPAF1-201ENST00000329231 ZBTB1Q9Y2K1 713 aa36.51■■■■□ 3.44
ATPAF1-201ENST00000329231 WDR43Q15061 677 aaKnown RBP eCLIP36.5■■■■□ 3.43
ATPAF1-201ENST00000329231 TAF7Q15545 349 aaPredicted RBP36.5■■■■□ 3.43
ATPAF1-201ENST00000329231 USP42Q9H9J4 1324 aaKnown RBP36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms