RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 UPF3BQ9BZI7 483 aaKnown RBP21.65■■□□□ 1.06
PRKCB-202ENST00000321728 HMGN5P82970 282 aaKnown RBP21.65■■□□□ 1.06
PRKCB-202ENST00000321728 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
PRKCB-202ENST00000321728 RILPL2Q969X0 211 aa21.64■■□□□ 1.06
PRKCB-202ENST00000321728 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.06
PRKCB-202ENST00000321728 PTPRCP08575 1304 aa21.64■■□□□ 1.06
PRKCB-202ENST00000321728 TRIM6-TRIM34B2RNG4 842 aa21.64■■□□□ 1.05
PRKCB-202ENST00000321728 ADCY5O95622 1261 aa21.64■■□□□ 1.05
PRKCB-202ENST00000321728 TXNDC2Q86VQ3 553 aa21.64■■□□□ 1.05
PRKCB-202ENST00000321728 ZHX1Q9UKY1 873 aaPredicted RBP21.64■■□□□ 1.05
PRKCB-202ENST00000321728 UVSSAQ2YD98 709 aa21.63■■□□□ 1.05
PRKCB-202ENST00000321728 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
PRKCB-202ENST00000321728 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
PRKCB-202ENST00000321728 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
PRKCB-202ENST00000321728 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
PRKCB-202ENST00000321728 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
PRKCB-202ENST00000321728 ANAPC15P60006 121 aa21.62■■□□□ 1.05
PRKCB-202ENST00000321728 MCM10Q7L590 875 aa21.62■■□□□ 1.05
PRKCB-202ENST00000321728 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
PRKCB-202ENST00000321728 FAM177BA6PVY3 158 aa21.61■■□□□ 1.05
PRKCB-202ENST00000321728 PLCB2Q00722 1185 aa21.61■■□□□ 1.05
PRKCB-202ENST00000321728 ZNF710Q8N1W2 664 aa21.61■■□□□ 1.05
PRKCB-202ENST00000321728 HCLS1P14317 486 aaPredicted RBP21.61■■□□□ 1.05
PRKCB-202ENST00000321728 CCDC183Q5T5S1 534 aa21.6■■□□□ 1.05
PRKCB-202ENST00000321728 MIS18AQ9NYP9 233 aa21.6■■□□□ 1.05
PRKCB-202ENST00000321728 F6X3S4 739 aa21.6■■□□□ 1.05
PRKCB-202ENST00000321728 CHL1O00533 1208 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 CHMLP26374 656 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 COG3Q96JB2 828 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 KIF3AQ9Y496 699 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 PREX1Q8TCU6 1659 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 MX1P20591 662 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 CBX1P83916 185 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 ATP7BP35670 1465 aa21.59■■□□□ 1.05
PRKCB-202ENST00000321728 LRRCC1Q9C099 1032 aa21.58■■□□□ 1.05
PRKCB-202ENST00000321728 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
PRKCB-202ENST00000321728 DMTNQ08495 405 aa21.58■■□□□ 1.04
PRKCB-202ENST00000321728 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.04
PRKCB-202ENST00000321728 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
PRKCB-202ENST00000321728 TCHHQ07283 1943 aa21.57■■□□□ 1.04
PRKCB-202ENST00000321728 GTF2F1P35269 517 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 36
PRKCB-202ENST00000321728 ZSCAN20P17040 1043 aaPredicted RBP21.56■■□□□ 1.04
PRKCB-202ENST00000321728 GNAI2P04899 355 aa21.56■■□□□ 1.04
PRKCB-202ENST00000321728 PPP4R3BQ5MIZ7 849 aa21.56■■□□□ 1.04
PRKCB-202ENST00000321728 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
PRKCB-202ENST00000321728 LETM1O95202 739 aaPredicted RBP21.55■■□□□ 1.04
PRKCB-202ENST00000321728 G2E3Q7L622 706 aa21.55■■□□□ 1.04
PRKCB-202ENST00000321728 KIAA0232Q92628 1395 aa21.55■■□□□ 1.04
PRKCB-202ENST00000321728 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
PRKCB-202ENST00000321728 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
PRKCB-202ENST00000321728 UTP14CQ5TAP6 766 aaKnown RBP21.54■■□□□ 1.04
PRKCB-202ENST00000321728 AATKQ6ZMQ8 1374 aa21.54■■□□□ 1.04
PRKCB-202ENST00000321728 KDM4AO75164 1064 aa21.54■■□□□ 1.04
PRKCB-202ENST00000321728 SPTLC3Q9NUV7 552 aa21.54■■□□□ 1.04
PRKCB-202ENST00000321728 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
PRKCB-202ENST00000321728 SALL3Q9BXA9 1300 aa21.53■■□□□ 1.04
PRKCB-202ENST00000321728 UNC5CLQ8IV45 518 aa21.52■■□□□ 1.04
PRKCB-202ENST00000321728 TMEM87AQ8NBN3 555 aa21.52■■□□□ 1.04
PRKCB-202ENST00000321728 FIBPO43427 364 aa21.52■■□□□ 1.04
PRKCB-202ENST00000321728 UBE2HP62256 183 aa21.52■■□□□ 1.04
PRKCB-202ENST00000321728 BCL2L12Q9HB09 334 aa21.52■■□□□ 1.04
PRKCB-202ENST00000321728 WASLO00401 505 aaPredicted RBP21.52■■□□□ 1.03
PRKCB-202ENST00000321728 CPS1P31327 1500 aa21.51■■□□□ 1.03
PRKCB-202ENST00000321728 SSH2Q76I76 1423 aa21.51■■□□□ 1.03
PRKCB-202ENST00000321728 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
PRKCB-202ENST00000321728 ZSCAN22P10073 491 aaPredicted RBP21.51■■□□□ 1.03
PRKCB-202ENST00000321728 CHAF1AQ13111 956 aaPredicted RBP21.51■■□□□ 1.03
PRKCB-202ENST00000321728 ATP2B3Q16720 1220 aa21.51■■□□□ 1.03
PRKCB-202ENST00000321728 GIMAP6Q6P9H5 292 aa21.5■■□□□ 1.03
PRKCB-202ENST00000321728 METP08581 1390 aa21.5■■□□□ 1.03
PRKCB-202ENST00000321728 PNMA6EA0A0J9YXQ4 647 aa21.5■■□□□ 1.03
PRKCB-202ENST00000321728 LARP6Q9BRS8 491 aaKnown RBP21.5■■□□□ 1.03
PRKCB-202ENST00000321728 EIF4A2Q14240 407 aaKnown RBP21.49■■□□□ 1.03
PRKCB-202ENST00000321728 IL25Q9H293 177 aa21.49■■□□□ 1.03
PRKCB-202ENST00000321728 NEO1Q92859 1461 aa21.49■■□□□ 1.03
PRKCB-202ENST00000321728 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
PRKCB-202ENST00000321728 FOXO3O43524 673 aa21.49■■□□□ 1.03
PRKCB-202ENST00000321728 PDCL2Q8N4E4 241 aa21.49■■□□□ 1.03
PRKCB-202ENST00000321728 STX6O43752 255 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 HSPA4P34932 840 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 SPC24Q8NBT2 197 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 PODXL2Q9NZ53 605 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 SPDYE4A6NLX3 237 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
PRKCB-202ENST00000321728 SYT1P21579 422 aa21.47■■□□□ 1.03
PRKCB-202ENST00000321728 KIAA1524Q8TCG1 905 aa21.47■■□□□ 1.03
PRKCB-202ENST00000321728 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
PRKCB-202ENST00000321728 PYCARDQ9ULZ3 195 aa21.47■■□□□ 1.03
PRKCB-202ENST00000321728 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
PRKCB-202ENST00000321728 HSP90AB2PQ58FF8 381 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 IL17RAQ96F46 866 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 STAP2Q9UGK3 403 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 RIOK3O14730 519 aaKnown RBP21.46■■□□□ 1.03
PRKCB-202ENST00000321728 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
PRKCB-202ENST00000321728 ATP6V1DQ9Y5K8 247 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms