RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 MRC1P22897 1456 aa24.82■■□□□ 1.56
CIRBP-201ENST00000320936 DLG5Q8TDM6 1919 aa24.82■■□□□ 1.56
CIRBP-201ENST00000320936 ATG3Q9NT62 314 aa24.82■■□□□ 1.56
CIRBP-201ENST00000320936 SLC52A2Q9HAB3 445 aa24.81■■□□□ 1.56
CIRBP-201ENST00000320936 SLC15A2Q16348 729 aa24.8■■□□□ 1.56
CIRBP-201ENST00000320936 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
CIRBP-201ENST00000320936 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
CIRBP-201ENST00000320936 SIK1P57059 783 aa24.79■■□□□ 1.56
CIRBP-201ENST00000320936 TEFQ10587 303 aa24.79■■□□□ 1.56
CIRBP-201ENST00000320936 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
CIRBP-201ENST00000320936 RBM42Q9BTD8 480 aaKnown RBP24.79■■□□□ 1.56
CIRBP-201ENST00000320936 TUBGCP6Q96RT7 1819 aa24.79■■□□□ 1.56
CIRBP-201ENST00000320936 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-201ENST00000320936 C4BP0C0L5 1744 aa24.77■■□□□ 1.56
CIRBP-201ENST00000320936 ATP6V1AP38606 617 aa24.76■■□□□ 1.55
CIRBP-201ENST00000320936 PLEKHF1Q96S99 279 aa24.76■■□□□ 1.55
CIRBP-201ENST00000320936 CASZ1Q86V15 1759 aa24.76■■□□□ 1.55
CIRBP-201ENST00000320936 QSER1Q2KHR3 1735 aa24.75■■□□□ 1.55
CIRBP-201ENST00000320936 PTCD1O75127 700 aaKnown RBP24.75■■□□□ 1.55
CIRBP-201ENST00000320936 HMGB2P26583 209 aaKnown RBP24.75■■□□□ 1.55
CIRBP-201ENST00000320936 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
CIRBP-201ENST00000320936 IL17REQ8NFR9 667 aa24.75■■□□□ 1.55
CIRBP-201ENST00000320936 TFCP2L1Q9NZI6 479 aa24.75■■□□□ 1.55
CIRBP-201ENST00000320936 MCM10Q7L590 875 aa24.74■■□□□ 1.55
CIRBP-201ENST00000320936 NFE2L2Q16236 605 aa24.73■■□□□ 1.55
CIRBP-201ENST00000320936 AKT1S1Q96B36 256 aa24.73■■□□□ 1.55
CIRBP-201ENST00000320936 ZNF831Q5JPB2 1677 aa24.73■■□□□ 1.55
CIRBP-201ENST00000320936 SLC39A6Q13433 755 aa24.72■■□□□ 1.55
CIRBP-201ENST00000320936 AK7Q96M32 723 aa24.72■■□□□ 1.55
CIRBP-201ENST00000320936 ADAMTS8Q9UP79 889 aa24.72■■□□□ 1.55
CIRBP-201ENST00000320936 DCTN1Q14203 1278 aa24.71■■□□□ 1.55
CIRBP-201ENST00000320936 TTC5Q8N0Z6 440 aa24.71■■□□□ 1.55
CIRBP-201ENST00000320936 MRS2Q9HD23 443 aa24.71■■□□□ 1.55
CIRBP-201ENST00000320936 COL5A3P25940 1745 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-201ENST00000320936 CEMIPQ8WUJ3 1361 aa24.71■■□□□ 1.55
CIRBP-201ENST00000320936 LRP5O75197 1615 aa24.7■■□□□ 1.55
CIRBP-201ENST00000320936 ITPK1Q13572 414 aa24.7■■□□□ 1.54
CIRBP-201ENST00000320936 LINC00116Q8NCU8 138 aa24.7■■□□□ 1.54
CIRBP-201ENST00000320936 UBR2Q8IWV8 1755 aa24.7■■□□□ 1.54
CIRBP-201ENST00000320936 TJP1Q07157 1748 aa24.69■■□□□ 1.54
CIRBP-201ENST00000320936 SRCAPQ6ZRS2 3230 aa24.69■■□□□ 1.54
CIRBP-201ENST00000320936 HTATSF1O43719 755 aaKnown RBP24.69■■□□□ 1.54
CIRBP-201ENST00000320936 CCDC184Q52MB2 194 aa24.69■■□□□ 1.54
CIRBP-201ENST00000320936 PDGFDQ9GZP0 370 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-201ENST00000320936 MSH5O43196 834 aa24.68■■□□□ 1.54
CIRBP-201ENST00000320936 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
CIRBP-201ENST00000320936 UBR3Q6ZT12 1888 aa24.68■■□□□ 1.54
CIRBP-201ENST00000320936 KCPQ6ZWJ8 1503 aa24.67■■□□□ 1.54
CIRBP-201ENST00000320936 BTBD11A6QL63 1104 aa24.66■■□□□ 1.54
CIRBP-201ENST00000320936 ZBTB7AO95365 584 aa24.66■■□□□ 1.54
CIRBP-201ENST00000320936 SLC4A9Q96Q91 983 aa24.66■■□□□ 1.54
CIRBP-201ENST00000320936 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
CIRBP-201ENST00000320936 PNPLA7Q6ZV29 1317 aa24.66■■□□□ 1.54
CIRBP-201ENST00000320936 RIPK4P57078 832 aa24.65■■□□□ 1.54
CIRBP-201ENST00000320936 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
CIRBP-201ENST00000320936 CICQ96RK0 1608 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-201ENST00000320936 GNPATO15228 680 aa24.64■■□□□ 1.54
CIRBP-201ENST00000320936 PHF14O94880 888 aa24.64■■□□□ 1.54
CIRBP-201ENST00000320936 TMPOP42166 694 aaKnown RBP24.63■■□□□ 1.53
CIRBP-201ENST00000320936 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
CIRBP-201ENST00000320936 LMOD3Q0VAK6 560 aa24.62■■□□□ 1.53
CIRBP-201ENST00000320936 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
CIRBP-201ENST00000320936 THUMPD2Q9BTF0 503 aaKnown RBP24.62■■□□□ 1.53
CIRBP-201ENST00000320936 ATF5Q9Y2D1 282 aaPredicted RBP24.61■■□□□ 1.53
CIRBP-201ENST00000320936 TAF7Q15545 349 aaPredicted RBP24.6■■□□□ 1.53
CIRBP-201ENST00000320936 DNAJC10Q8IXB1 793 aa24.6■■□□□ 1.53
CIRBP-201ENST00000320936 FLAD1Q8NFF5 587 aa24.6■■□□□ 1.53
CIRBP-201ENST00000320936 MTFR1LQ9H019 292 aa24.6■■□□□ 1.53
CIRBP-201ENST00000320936 MYH14Q7Z406 1995 aaKnown RBP24.59■■□□□ 1.53
CIRBP-201ENST00000320936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.59■■□□□ 1.53
CIRBP-201ENST00000320936 COL23A1Q86Y22 540 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-201ENST00000320936 ZNF496Q96IT1 587 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-201ENST00000320936 FMNL2Q96PY5 1086 aa24.59■■□□□ 1.53
CIRBP-201ENST00000320936 PPP1R1BQ9UD71 204 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-201ENST00000320936 CNTNAP4Q9C0A0 1308 aa24.58■■□□□ 1.53
CIRBP-201ENST00000320936 KDM3BQ7LBC6 1761 aa24.58■■□□□ 1.53
CIRBP-201ENST00000320936 CRKLP46109 303 aaKnown RBP24.58■■□□□ 1.52
CIRBP-201ENST00000320936 SMIM5Q71RC9 77 aa24.58■■□□□ 1.52
CIRBP-201ENST00000320936 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.52
CIRBP-201ENST00000320936 KCNQ3O43525 872 aa24.57■■□□□ 1.52
CIRBP-201ENST00000320936 SSFA2P28290 1259 aa24.57■■□□□ 1.52
CIRBP-201ENST00000320936 PNISRQ8TF01 805 aaKnown RBP24.57■■□□□ 1.52
CIRBP-201ENST00000320936 MIS18AQ9NYP9 233 aa24.57■■□□□ 1.52
CIRBP-201ENST00000320936 HEG1Q9ULI3 1381 aa24.56■■□□□ 1.52
CIRBP-201ENST00000320936 RC3H1Q5TC82 1133 aaKnown RBP24.56■■□□□ 1.52
CIRBP-201ENST00000320936 AMIGO3Q86WK7 504 aa24.56■■□□□ 1.52
CIRBP-201ENST00000320936 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
CIRBP-201ENST00000320936 SLC16A10Q8TF71 515 aa24.56■■□□□ 1.52
CIRBP-201ENST00000320936 APAF1O14727 1248 aa24.55■■□□□ 1.52
CIRBP-201ENST00000320936 C4AP0C0L4 1744 aa24.54■■□□□ 1.52
CIRBP-201ENST00000320936 CCDC87Q9NVE4 849 aa24.54■■□□□ 1.52
CIRBP-201ENST00000320936 STARD3NLO95772 234 aa24.53■■□□□ 1.52
CIRBP-201ENST00000320936 MSL1Q68DK7 614 aa24.53■■□□□ 1.52
CIRBP-201ENST00000320936 CYP19A1P11511 503 aaPredicted RBP24.52■■□□□ 1.52
CIRBP-201ENST00000320936 TRAPPC3LQ5T215 181 aa24.52■■□□□ 1.52
CIRBP-201ENST00000320936 FAM9BQ8IZU0 186 aa24.52■■□□□ 1.52
CIRBP-201ENST00000320936 RPS6KA4O75676 772 aa24.51■■□□□ 1.51
CIRBP-201ENST00000320936 POLD1P28340 1107 aa24.51■■□□□ 1.51
CIRBP-201ENST00000320936 TEX13AQ9BXU3 409 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-201ENST00000320936 TSPYL4Q9UJ04 414 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms