RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 MARF1Q9Y4F3 1742 aaKnown RBP29.99■■■□□ 2.39
CLPTM1L-201ENST00000320895 KRT28Q7Z3Y7 464 aa29.98■■■□□ 2.39
CLPTM1L-201ENST00000320895 MST1RQ04912 1400 aa29.96■■■□□ 2.39
CLPTM1L-201ENST00000320895 EIF2S2P20042 333 aaKnown RBP29.95■■■□□ 2.39
CLPTM1L-201ENST00000320895 SNX21Q969T3 373 aa29.95■■■□□ 2.39
CLPTM1L-201ENST00000320895 LRRC59Q96AG4 307 aaKnown RBP29.95■■■□□ 2.39
CLPTM1L-201ENST00000320895 NBPF6Q5VWK0 638 aa29.95■■■□□ 2.38
CLPTM1L-201ENST00000320895 NBPF4Q96M43 638 aa29.95■■■□□ 2.38
CLPTM1L-201ENST00000320895 PHAXQ9H814 394 aaKnown RBP29.94■■■□□ 2.38
CLPTM1L-201ENST00000320895 LGR6Q9HBX8 967 aa29.94■■■□□ 2.38
CLPTM1L-201ENST00000320895 XIRP1Q702N8 1843 aaKnown RBP29.94■■■□□ 2.38
CLPTM1L-201ENST00000320895 PNMA6EA0A0J9YXQ4 647 aa29.94■■■□□ 2.38
CLPTM1L-201ENST00000320895 CCT4P50991 539 aaKnown RBP29.93■■■□□ 2.38
CLPTM1L-201ENST00000320895 CCDC30Q5VVM6 783 aa29.92■■■□□ 2.38
CLPTM1L-201ENST00000320895 TAF7Q15545 349 aaPredicted RBP29.91■■■□□ 2.38
CLPTM1L-201ENST00000320895 KCNQ3O43525 872 aa29.91■■■□□ 2.38
CLPTM1L-201ENST00000320895 GNAI2P04899 355 aa29.91■■■□□ 2.38
CLPTM1L-201ENST00000320895 CADPS2Q86UW7 1296 aa29.91■■■□□ 2.38
CLPTM1L-201ENST00000320895 TNPO1Q92973 898 aaKnown RBP29.91■■■□□ 2.38
CLPTM1L-201ENST00000320895 MAP3K5Q99683 1374 aa29.9■■■□□ 2.38
CLPTM1L-201ENST00000320895 ANXA1P04083 346 aa29.9■■■□□ 2.38
CLPTM1L-201ENST00000320895 DDIT3P35638 169 aa29.9■■■□□ 2.38
CLPTM1L-201ENST00000320895 TRAK2O60296 914 aa29.89■■■□□ 2.38
CLPTM1L-201ENST00000320895 K7ELQ4 463 aaPredicted RBP29.89■■■□□ 2.38
CLPTM1L-201ENST00000320895 LRRFIP2Q9Y608 721 aaKnown RBP29.88■■■□□ 2.37
CLPTM1L-201ENST00000320895 HMMRO75330 724 aa29.88■■■□□ 2.37
CLPTM1L-201ENST00000320895 HDGFL1Q5TGJ6 251 aa29.88■■■□□ 2.37
CLPTM1L-201ENST00000320895 USP26Q9BXU7 913 aa29.88■■■□□ 2.37
CLPTM1L-201ENST00000320895 NCOA3Q9Y6Q9 1424 aa29.85■■■□□ 2.37
CLPTM1L-201ENST00000320895 PDE1AP54750 535 aa29.85■■■□□ 2.37
CLPTM1L-201ENST00000320895 MPRIPQ6WCQ1 1025 aa29.84■■■□□ 2.37
CLPTM1L-201ENST00000320895 HTATSF1O43719 755 aaKnown RBP29.84■■■□□ 2.37
CLPTM1L-201ENST00000320895 CABLES1Q8TDN4 633 aa29.83■■■□□ 2.37
CLPTM1L-201ENST00000320895 IP6K1Q92551 441 aa29.83■■■□□ 2.37
CLPTM1L-201ENST00000320895 LTN1O94822 1766 aa29.82■■■□□ 2.36
CLPTM1L-201ENST00000320895 GCP02774 474 aa29.82■■■□□ 2.36
CLPTM1L-201ENST00000320895 IL1RAPL2Q9NP60 686 aa29.82■■■□□ 2.36
CLPTM1L-201ENST00000320895 SSFA2P28290 1259 aa29.81■■■□□ 2.36
CLPTM1L-201ENST00000320895 USP44Q9H0E7 712 aa29.81■■■□□ 2.36
CLPTM1L-201ENST00000320895 TRPM3Q9HCF6 1732 aaPredicted RBP29.81■■■□□ 2.36
CLPTM1L-201ENST00000320895 KIF1AQ12756 1690 aa29.8■■■□□ 2.36
CLPTM1L-201ENST00000320895 DCCP43146 1447 aa29.8■■■□□ 2.36
CLPTM1L-201ENST00000320895 ZC3H6P61129 1189 aaKnown RBP29.8■■■□□ 2.36
CLPTM1L-201ENST00000320895 BRINP3Q76B58 766 aa29.79■■■□□ 2.36
CLPTM1L-201ENST00000320895 RILPL2Q969X0 211 aa29.79■■■□□ 2.36
CLPTM1L-201ENST00000320895 CHPF2Q9P2E5 772 aa29.79■■■□□ 2.36
CLPTM1L-201ENST00000320895 LRRCC1Q9C099 1032 aa29.78■■■□□ 2.36
CLPTM1L-201ENST00000320895 NFAT5O94916 1531 aa29.78■■■□□ 2.36
CLPTM1L-201ENST00000320895 GNAI3P08754 354 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 ATP8B2P98198 1209 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 RAB3GAP1Q15042 981 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 CASC1Q6TDU7 716 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 TRIM6-TRIM34B2RNG4 842 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 ZNF530Q6P9A1 599 aaPredicted RBP29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 PANK2Q9BZ23 570 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 SLAIN2Q9P270 581 aa29.77■■■□□ 2.36
CLPTM1L-201ENST00000320895 USP54Q70EL1 1684 aa29.76■■■□□ 2.35
CLPTM1L-201ENST00000320895 MAP4K4O95819 1239 aaPredicted RBP29.76■■■□□ 2.35
CLPTM1L-201ENST00000320895 UBTFL1P0CB47 393 aaPredicted RBP29.76■■■□□ 2.35
CLPTM1L-201ENST00000320895 NUTM1Q86Y26 1132 aa29.75■■■□□ 2.35
CLPTM1L-201ENST00000320895 UNC5CLQ8IV45 518 aa29.75■■■□□ 2.35
CLPTM1L-201ENST00000320895 KCNH5Q8NCM2 988 aa29.75■■■□□ 2.35
CLPTM1L-201ENST00000320895 EIF4A1P60842 406 aaKnown RBP29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 NPHP3Q7Z494 1330 aa29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 PRAMEF22A3QJZ6 481 aa29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 NBPF7P0C2Y1 421 aaPredicted RBP29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 PKP1Q13835 747 aa29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 RABEP1Q15276 862 aa29.74■■■□□ 2.35
CLPTM1L-201ENST00000320895 MX1P20591 662 aa29.73■■■□□ 2.35
CLPTM1L-201ENST00000320895 GOLGA6L3A6NEY3 463 aa29.73■■■□□ 2.35
CLPTM1L-201ENST00000320895 XRCC6P12956 609 aaKnown RBP eCLIP29.73■■■□□ 2.352e-6■□□□□ 8.3
CLPTM1L-201ENST00000320895 PI4KAP2A4QPH2 592 aa29.72■■■□□ 2.35
CLPTM1L-201ENST00000320895 TEFQ10587 303 aa29.72■■■□□ 2.35
CLPTM1L-201ENST00000320895 PI4KAP1Q8N8J0 262 aa29.72■■■□□ 2.35
CLPTM1L-201ENST00000320895 BTBD11A6QL63 1104 aa29.72■■■□□ 2.35
CLPTM1L-201ENST00000320895 ERC2O15083 957 aa29.72■■■□□ 2.35
CLPTM1L-201ENST00000320895 DDX11L8A8MPP1 907 aa29.71■■■□□ 2.35
CLPTM1L-201ENST00000320895 ZGPATQ8N5A5 531 aaKnown RBP29.71■■■□□ 2.35
CLPTM1L-201ENST00000320895 AXIN2Q9Y2T1 843 aa29.71■■■□□ 2.35
CLPTM1L-201ENST00000320895 NOL8Q76FK4 1167 aaKnown RBP29.71■■■□□ 2.35
CLPTM1L-201ENST00000320895 PPP1R42Q7Z4L9 355 aa29.71■■■□□ 2.35
CLPTM1L-201ENST00000320895 AK9Q5TCS8 1911 aa29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 SURF6O75683 361 aaKnown RBP29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 ARHGEF25Q86VW2 580 aa29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 LRRC37A3O60309 1634 aa29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 SRCIN1Q9C0H9 1055 aa29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 CIZ1Q9ULV3 898 aaPredicted RBP29.69■■■□□ 2.34
CLPTM1L-201ENST00000320895 CHAMP1Q96JM3 812 aa29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 OSBPL3Q9H4L5 887 aa29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 SALL3Q9BXA9 1300 aa29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 ALS2Q96Q42 1657 aa29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 FAM208AQ9UK61 1670 aaKnown RBP29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 MED1Q15648 1581 aaPredicted RBP29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 GBP4Q96PP9 640 aa29.68■■■□□ 2.34
CLPTM1L-201ENST00000320895 IBTKQ9P2D0 1353 aaPredicted RBP29.67■■■□□ 2.34
CLPTM1L-201ENST00000320895 REC8O95072 547 aa29.67■■■□□ 2.34
CLPTM1L-201ENST00000320895 CEMIPQ8WUJ3 1361 aa29.67■■■□□ 2.34
CLPTM1L-201ENST00000320895 PROSER3Q2NL68 480 aa29.67■■■□□ 2.34
CLPTM1L-201ENST00000320895 RGPD2P0DJD1 1756 aa29.66■■■□□ 2.34
CLPTM1L-201ENST00000320895 SRGAP3O43295 1099 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms