RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
IFT88-201ENST00000319980 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
IFT88-201ENST00000319980 ZNF530Q6P9A1 599 aaPredicted RBP9.48□□□□□ -0.89
IFT88-201ENST00000319980 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 FLIIQ13045 1269 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
IFT88-201ENST00000319980 MPRIPQ6WCQ1 1025 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
IFT88-201ENST00000319980 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 BABAM1Q9NWV8 329 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 TEFQ10587 303 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
IFT88-201ENST00000319980 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 TBC1D32Q96NH3 1257 aa9.47□□□□□ -0.89
IFT88-201ENST00000319980 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.89
IFT88-201ENST00000319980 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 CEP85Q6P2H3 762 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 DCTPP1Q9H773 170 aa9.46□□□□□ -0.89
IFT88-201ENST00000319980 EIF2S2P20042 333 aaKnown RBP9.46□□□□□ -0.9
IFT88-201ENST00000319980 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
IFT88-201ENST00000319980 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
IFT88-201ENST00000319980 APBB1O00213 710 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 LTN1O94822 1766 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 BTBD11A6QL63 1104 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 KCNQ3O43525 872 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
IFT88-201ENST00000319980 MST1RQ04912 1400 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 BMP2KLQ5H9B9 411 aa9.45□□□□□ -0.9
IFT88-201ENST00000319980 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
IFT88-201ENST00000319980 PHAXQ9H814 394 aaKnown RBP9.44□□□□□ -0.9
IFT88-201ENST00000319980 ERBB3P21860 1342 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 SOS1Q07889 1333 aaPredicted RBP9.44□□□□□ -0.9
IFT88-201ENST00000319980 COL22A1Q8NFW1 1626 aaPredicted RBP9.44□□□□□ -0.9
IFT88-201ENST00000319980 HSPA1LP34931 641 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 C16orf71Q8IYS4 520 aaPredicted RBP9.44□□□□□ -0.9
IFT88-201ENST00000319980 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 SLIT3O75094 1523 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 NPHP3Q7Z494 1330 aa9.44□□□□□ -0.9
IFT88-201ENST00000319980 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
IFT88-201ENST00000319980 SOCS7O14512 581 aa9.43□□□□□ -0.9
IFT88-201ENST00000319980 BECN1Q14457 450 aa9.43□□□□□ -0.9
IFT88-201ENST00000319980 HMMRO75330 724 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 GNAI2P04899 355 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
IFT88-201ENST00000319980 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 PLEKHM2Q8IWE5 1019 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 CHPF2Q9P2E5 772 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
IFT88-201ENST00000319980 ANXA1P04083 346 aa9.41□□□□□ -0.9
IFT88-201ENST00000319980 GNAI3P08754 354 aa9.41□□□□□ -0.9
IFT88-201ENST00000319980 OTUD7AQ8TE49 926 aaPredicted RBP9.41□□□□□ -0.9
IFT88-201ENST00000319980 PXDNQ92626 1479 aa9.41□□□□□ -0.9
IFT88-201ENST00000319980 HOXB7P09629 217 aa9.4□□□□□ -0.9
IFT88-201ENST00000319980 GSPT1P15170 499 aaKnown RBP9.4□□□□□ -0.9
IFT88-201ENST00000319980 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.9
IFT88-201ENST00000319980 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
IFT88-201ENST00000319980 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
IFT88-201ENST00000319980 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
IFT88-201ENST00000319980 USP44Q9H0E7 712 aa9.4□□□□□ -0.9
IFT88-201ENST00000319980 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
IFT88-201ENST00000319980 NCAPD2Q15021 1401 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 KIF1AQ12756 1690 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 PI4KAP2A4QPH2 592 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 BRINP3Q76B58 766 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 PI4KAP1Q8N8J0 262 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.91
IFT88-201ENST00000319980 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.91
IFT88-201ENST00000319980 LRRFIP2Q9Y608 721 aaKnown RBP9.4□□□□□ -0.91
IFT88-201ENST00000319980 PHRF1Q9P1Y6 1649 aaKnown RBP9.4□□□□□ -0.91
IFT88-201ENST00000319980 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
IFT88-201ENST00000319980 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
IFT88-201ENST00000319980 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
IFT88-201ENST00000319980 RGPD2P0DJD1 1756 aa9.39□□□□□ -0.91
IFT88-201ENST00000319980 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
IFT88-201ENST00000319980 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
IFT88-201ENST00000319980 UBTFL1P0CB47 393 aaPredicted RBP9.39□□□□□ -0.91
IFT88-201ENST00000319980 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
IFT88-201ENST00000319980 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
IFT88-201ENST00000319980 TNS3Q68CZ2 1445 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 CDC45O75419 566 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 ATP8B2P98198 1209 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 DNAAF4Q8WXU2 420 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
IFT88-201ENST00000319980 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 RBM25P49756 843 aaKnown RBP9.37□□□□□ -0.91
IFT88-201ENST00000319980 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms