RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 CC2D1BQ5T0F9 858 aaKnown RBP12.69□□□□□ -0.38
KARS-202ENST00000319410 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
KARS-202ENST00000319410 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
KARS-202ENST00000319410 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
KARS-202ENST00000319410 SLC15A2Q16348 729 aa12.68□□□□□ -0.38
KARS-202ENST00000319410 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
KARS-202ENST00000319410 RALBP1Q15311 655 aa12.67□□□□□ -0.38
KARS-202ENST00000319410 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
KARS-202ENST00000319410 ZNF827Q17R98 1081 aa12.67□□□□□ -0.38
KARS-202ENST00000319410 EYA1Q99502 592 aa12.67□□□□□ -0.38
KARS-202ENST00000319410 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
KARS-202ENST00000319410 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
KARS-202ENST00000319410 CASZ1Q86V15 1759 aa12.66□□□□□ -0.38
KARS-202ENST00000319410 CYP27B1O15528 508 aa12.66□□□□□ -0.38
KARS-202ENST00000319410 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
KARS-202ENST00000319410 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
KARS-202ENST00000319410 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
KARS-202ENST00000319410 UTRNP46939 3433 aa12.65□□□□□ -0.39
KARS-202ENST00000319410 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
KARS-202ENST00000319410 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
KARS-202ENST00000319410 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
KARS-202ENST00000319410 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
KARS-202ENST00000319410 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
KARS-202ENST00000319410 MTHFSP49914 203 aa12.63□□□□□ -0.39
KARS-202ENST00000319410 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
KARS-202ENST00000319410 FTSJ3Q8IY81 847 aaKnown RBP12.63□□□□□ -0.39
KARS-202ENST00000319410 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
KARS-202ENST00000319410 PPP2R1AP30153 589 aa12.63□□□□□ -0.39
KARS-202ENST00000319410 BCCIPQ9P287 314 aaKnown RBP eCLIP12.63□□□□□ -0.39
KARS-202ENST00000319410 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
KARS-202ENST00000319410 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
KARS-202ENST00000319410 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 PTGER2P43116 358 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
KARS-202ENST00000319410 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 RRAGDQ9NQL2 400 aaPredicted RBP12.61□□□□□ -0.39
KARS-202ENST00000319410 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
KARS-202ENST00000319410 PKD1L3Q7Z443 1732 aa12.61□□□□□ -0.39
KARS-202ENST00000319410 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
KARS-202ENST00000319410 LY75O60449 1722 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 IL13P35225 146 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 CLCN1P35523 988 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 SPG7Q9UQ90 795 aa12.6□□□□□ -0.39
KARS-202ENST00000319410 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
KARS-202ENST00000319410 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
KARS-202ENST00000319410 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
KARS-202ENST00000319410 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
KARS-202ENST00000319410 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
KARS-202ENST00000319410 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
KARS-202ENST00000319410 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
KARS-202ENST00000319410 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
KARS-202ENST00000319410 PIGBQ92521 554 aa12.58□□□□□ -0.4
KARS-202ENST00000319410 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
KARS-202ENST00000319410 ITGB4P16144 1822 aa12.58□□□□□ -0.4
KARS-202ENST00000319410 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
KARS-202ENST00000319410 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
KARS-202ENST00000319410 TPM2P07951 284 aa12.57□□□□□ -0.4
KARS-202ENST00000319410 PHKG2P15735 406 aa12.57□□□□□ -0.4
KARS-202ENST00000319410 CHRM1P11229 460 aaPredicted RBP12.57□□□□□ -0.4
KARS-202ENST00000319410 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
KARS-202ENST00000319410 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
KARS-202ENST00000319410 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
KARS-202ENST00000319410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■□□ 18.1
KARS-202ENST00000319410 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
KARS-202ENST00000319410 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
KARS-202ENST00000319410 KDRP35968 1356 aa12.56□□□□□ -0.4
KARS-202ENST00000319410 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
KARS-202ENST00000319410 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
KARS-202ENST00000319410 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
KARS-202ENST00000319410 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
KARS-202ENST00000319410 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
KARS-202ENST00000319410 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 ANP32CO43423 234 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 MSL1Q68DK7 614 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 COL23A1Q86Y22 540 aaPredicted RBP12.54□□□□□ -0.4
KARS-202ENST00000319410 C5P01031 1676 aa12.54□□□□□ -0.4
KARS-202ENST00000319410 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
KARS-202ENST00000319410 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
KARS-202ENST00000319410 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
KARS-202ENST00000319410 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
KARS-202ENST00000319410 HMOX1P09601 288 aa12.52□□□□□ -0.4
KARS-202ENST00000319410 PHF14O94880 888 aa12.52□□□□□ -0.41
KARS-202ENST00000319410 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
KARS-202ENST00000319410 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
KARS-202ENST00000319410 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.41
KARS-202ENST00000319410 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
KARS-202ENST00000319410 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
KARS-202ENST00000319410 SIK1P57059 783 aa12.51□□□□□ -0.41
KARS-202ENST00000319410 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
KARS-202ENST00000319410 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
KARS-202ENST00000319410 ATG3Q9NT62 314 aa12.51□□□□□ -0.41
KARS-202ENST00000319410 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
KARS-202ENST00000319410 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
KARS-202ENST00000319410 ITPK1Q13572 414 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms